Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS22125

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,891,038	-		DDA3937_RS23120	0.13	+0.9
1,891,156	-		DDA3937_RS23120	0.26	-0.6
1,891,156	-		DDA3937_RS23120	0.26	-0.3
1,891,156	-		DDA3937_RS23120	0.26	-0.5
1,891,156	-		DDA3937_RS23120	0.26	-0.2
1,891,156	-		DDA3937_RS23120	0.26	-0.2
1,891,156	-		DDA3937_RS23120	0.26	+1.1
1,891,156	-		DDA3937_RS23120	0.26	-1.7
1,891,156	-		DDA3937_RS23120	0.26	+1.0
1,891,156	-		DDA3937_RS23120	0.26	+0.2
1,891,157	+		DDA3937_RS23120	0.26	-0.1
1,891,157	+		DDA3937_RS23120	0.26	-0.4
1,891,173	+		DDA3937_RS23120	0.28	-1.1
1,891,173	+		DDA3937_RS23120	0.28	-0.7
1,891,174	-		DDA3937_RS23120	0.28	-0.6
1,891,185	+		DDA3937_RS23120	0.30	+0.1
1,891,185	+		DDA3937_RS23120	0.30	+0.2
1,891,185	+		DDA3937_RS23120	0.30	+0.4
1,891,186	-		DDA3937_RS23120	0.30	-0.4
1,891,186	-		DDA3937_RS23120	0.30	+0.6
1,891,187	+		DDA3937_RS23120	0.30	-0.4
1,891,187	+		DDA3937_RS23120	0.30	+0.4
1,891,188	-		DDA3937_RS23120	0.30	-0.2
1,891,225	-		DDA3937_RS23120	0.34	+0.1
1,891,225	-		DDA3937_RS23120	0.34	+0.6
1,891,225	-		DDA3937_RS23120	0.34	-0.2
1,891,308	-		DDA3937_RS23120	0.43	-0.1
1,891,308	-		DDA3937_RS23120	0.43	+0.7
1,891,318	+		DDA3937_RS23120	0.44	+0.5
1,891,318	+		DDA3937_RS23120	0.44	+0.4
1,891,319	-		DDA3937_RS23120	0.44	-0.6
1,891,343	+		DDA3937_RS23120	0.47	-0.7
1,891,404	+		DDA3937_RS23120	0.53	-0.5
1,891,404	+		DDA3937_RS23120	0.53	-0.6
1,891,407	-		DDA3937_RS23120	0.54	-0.2
1,891,410	-		DDA3937_RS23120	0.54	-0.4
1,891,550	+		DDA3937_RS23120	0.69	-1.0
1,891,550	+		DDA3937_RS23120	0.69	-0.3
1,891,551	-		DDA3937_RS23120	0.70	-0.6
1,891,551	-		DDA3937_RS23120	0.70	-0.0
1,891,572	-		DDA3937_RS23120	0.72	+0.1
1,891,580	+		DDA3937_RS23120	0.73	+0.3
1,891,587	+		DDA3937_RS23120	0.73	+0.2
1,891,588	-		DDA3937_RS23120	0.74	+2.4
1,891,634	+		DDA3937_RS23120	0.79	-0.4
1,891,727	+		DDA3937_RS23120	0.89	+2.0
1,891,727	+		DDA3937_RS23120	0.89	-1.2
1,891,728	-		DDA3937_RS23120	0.89	-0.5
1,891,728	-		DDA3937_RS23120	0.89	-0.1
1,891,728	-		DDA3937_RS23120	0.89	-0.8
1,891,748	+				-1.1
1,891,748	+				-1.9
1,891,748	+				-0.2
1,891,749	-				-0.6
1,891,749	-				+0.7
1,891,751	+				-0.4
1,891,751	+				-0.7
1,891,751	+				+0.4
1,891,751	+				+0.6
1,891,751	+				-1.6
1,891,752	-				+0.2
1,891,752	-				+0.1
1,891,752	-				+0.7
1,891,753	+				+0.7
1,891,753	+				-1.4
1,891,753	+				-0.0
1,891,753	+				-0.4
1,891,753	+				-0.4
1,891,753	+				+2.2
1,891,753	+				-0.0
1,891,754	-				-1.2
1,891,754	-				+0.5
1,891,754	-				-0.3
1,891,754	-				-0.3
1,891,754	-				+0.7
1,891,754	-				+0.4
1,891,770	+				-0.6
1,891,770	+				-1.2
1,891,771	-				-0.5
1,891,771	-				-0.8
1,891,815	-				-0.6
1,891,838	+				-0.7
1,891,844	+				-0.6
1,891,844	+				+1.2
1,891,844	+				+0.4
1,891,845	-				+2.0
1,891,845	-				-1.9
1,891,872	-				+0.6
1,891,886	-				+0.1
1,892,149	+		DDA3937_RS22125	0.67	-1.1
1,892,149	+		DDA3937_RS22125	0.67	-0.8
1,892,183	+		DDA3937_RS22125	0.82	-1.6
1,892,303	-		DDA3937_RS08355	0.11	-0.9
1,892,309	-		DDA3937_RS08355	0.13	-0.4
1,892,314	-		DDA3937_RS08355	0.15	+0.6
1,892,314	-		DDA3937_RS08355	0.15	-0.6
1,892,314	-		DDA3937_RS08355	0.15	+0.1
1,892,314	-		DDA3937_RS08355	0.15	-1.4
1,892,314	-		DDA3937_RS08355	0.15	-0.6
1,892,318	-		DDA3937_RS08355	0.16	-0.2
1,892,318	-		DDA3937_RS08355	0.16	-1.2
1,892,318	-		DDA3937_RS08355	0.16	-0.9
1,892,318	-		DDA3937_RS08355	0.16	-0.4
1,892,345	+		DDA3937_RS08355	0.25	-0.6
1,892,405	-		DDA3937_RS08355	0.45	-0.2
1,892,514	-		DDA3937_RS08355	0.82	-1.4
1,892,514	-		DDA3937_RS08355	0.82	-1.2
1,892,514	-		DDA3937_RS08355	0.82	+0.8
1,892,514	-		DDA3937_RS08355	0.82	+0.1
1,892,536	-		DDA3937_RS08355	0.89	+0.5
1,892,806	-		DDA3937_RS08360	0.85	+0.6
1,892,839	-				-1.6
1,892,839	-				+0.1
1,892,839	-				-1.4
1,892,839	-				-0.3
1,892,839	-				-1.8
1,892,839	-				+0.2
1,892,970	-				-0.9
1,892,970	-				+0.3
1,892,970	-				-0.9
1,892,995	+				-0.1
1,892,995	+				+1.8
1,892,999	+				-0.4
1,892,999	+				-1.8
1,893,000	-				+0.2
1,893,000	-				-1.9
1,893,000	-				+0.2
1,893,000	-				-0.2
1,893,009	+				+1.1
1,893,010	-				+0.2
1,893,012	+				-1.2
1,893,024	+				-1.9
1,893,032	-				+0.2
1,893,152	-				+0.7
1,893,156	-				-0.4
1,893,162	+				-0.9
1,893,162	+				-1.6
1,893,163	-				-0.2
1,893,167	+				-0.1
1,893,167	+				-0.4
1,893,167	+				+0.4
1,893,168	-				-0.2
1,893,168	-				+0.7
1,893,168	-				-0.8
1,893,168	-				-0.4
1,893,168	-				+0.8
1,893,168	-				+0.5
1,893,172	+				-0.6
1,893,172	+				+2.5
1,893,172	+				-0.4
1,893,173	-				+0.2
1,893,173	-				+1.7
1,893,173	-				+0.2
1,893,173	-				-0.6
1,893,173	-				-1.6
1,893,175	-				-1.1
1,893,204	-				-0.4
1,893,217	-				-0.5