Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS21990

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,302,127	+		DDA3937_RS05815	0.78	-0.8
1,302,127	+		DDA3937_RS05815	0.78	-1.3
1,302,127	+		DDA3937_RS05815	0.78	+0.2
1,302,127	+		DDA3937_RS05815	0.78	+0.3
1,302,127	+		DDA3937_RS05815	0.78	-1.7
1,302,128	-		DDA3937_RS05815	0.78	-1.2
1,302,137	+		DDA3937_RS05815	0.79	-0.5
1,302,137	+		DDA3937_RS05815	0.79	-0.2
1,302,137	+		DDA3937_RS05815	0.79	+1.2
1,302,190	+		DDA3937_RS05815	0.82	-1.6
1,302,190	+		DDA3937_RS05815	0.82	+0.6
1,302,191	-		DDA3937_RS05815	0.82	-0.2
1,302,212	+		DDA3937_RS05815	0.83	+0.6
1,302,225	+		DDA3937_RS05815	0.84	-0.5
1,302,225	+		DDA3937_RS05815	0.84	+0.6
1,302,306	-		DDA3937_RS05815	0.89	-0.3
1,302,306	-				-1.0
1,302,310	+		DDA3937_RS05815	0.89	-0.5
1,302,311	-		DDA3937_RS05815	0.89	+1.9
1,302,311	-		DDA3937_RS05815	0.89	-0.7
1,302,377	+				-2.4
1,302,378	-				-0.1
1,302,419	+				-0.5
1,302,486	-				-0.1
1,302,489	+				-0.7
1,302,489	+				-1.4
1,302,490	-				-2.0
1,302,496	+				+0.2
1,302,497	-				-0.4
1,302,525	+				-0.3
1,302,602	-				-0.1
1,302,629	+				-0.1
1,302,677	-				-2.0
1,302,723	+				-0.2
1,302,723	+				-0.5
1,302,930	+				-0.0
1,302,988	+				-0.4
1,303,186	-		DDA3937_RS21990	0.18	-2.0
1,303,300	+		DDA3937_RS21990	0.46	-2.6
1,303,300	+		DDA3937_RS21990	0.46	-2.2
1,303,303	+		DDA3937_RS21990	0.47	-0.1
1,303,327	+		DDA3937_RS21990	0.53	-0.7
1,303,328	-		DDA3937_RS21990	0.53	-1.1
1,303,331	-		DDA3937_RS21990	0.54	+0.6
1,303,331	-		DDA3937_RS21990	0.54	-0.8
1,303,421	-		DDA3937_RS21990	0.77	-1.0
1,303,472	-		DDA3937_RS21990	0.89	-0.7
1,303,550	+				-1.4
1,303,637	+				-0.2
1,303,651	+				-0.8
1,303,669	+				-1.1
1,303,669	+				-0.7
1,303,684	-				-0.4
1,303,687	-				-1.4
1,303,700	+				-0.3
1,303,718	-				+0.8
1,303,720	+				+0.4
1,303,720	+				-0.1
1,303,737	-				+0.6
1,303,748	+				-0.1
1,303,777	+				+0.2
1,303,777	+				-0.4
1,303,778	-				-2.0
1,303,900	-				-0.7
1,303,961	+		DDA3937_RS05820	0.13	-1.2
1,303,985	+		DDA3937_RS05820	0.19	+0.3
1,303,985	+		DDA3937_RS05820	0.19	-0.4
1,303,986	-		DDA3937_RS05820	0.20	+0.3
1,303,986	-		DDA3937_RS05820	0.20	-1.2
1,304,020	-		DDA3937_RS05820	0.29	+0.4
1,304,020	-				-1.0
1,304,166	+		DDA3937_RS05820	0.68	-1.1
1,304,166	+		DDA3937_RS05820	0.68	-0.7
1,304,166	+		DDA3937_RS05820	0.68	-1.5
1,304,166	+		DDA3937_RS05820	0.68	-0.2
1,304,166	+		DDA3937_RS05820	0.68	-2.2
1,304,166	+				+0.3
1,304,166	+		DDA3937_RS05820	0.68	-1.4
1,304,166	+		DDA3937_RS05820	0.68	-3.6
1,304,166	+		DDA3937_RS05820	0.68	-2.7
1,304,166	+		DDA3937_RS05820	0.68	+1.1
1,304,166	+		DDA3937_RS05820	0.68	-0.2
1,304,166	+		DDA3937_RS05820	0.68	-0.7
1,304,167	-		DDA3937_RS05820	0.68	+0.6
1,304,167	-		DDA3937_RS05820	0.68	-2.3
1,304,167	-		DDA3937_RS05820	0.68	-1.1
1,304,167	-		DDA3937_RS05820	0.68	+0.2
1,304,167	-		DDA3937_RS05820	0.68	-1.0
1,304,167	-		DDA3937_RS05820	0.68	-0.8
1,304,248	-				+0.8
1,304,248	-				-1.3
1,304,312	+				-1.4
1,304,313	-				-2.1
1,304,313	-				+0.2
1,304,313	-				-2.0
1,304,317	-				+0.7
1,304,317	-				+0.0
1,304,343	-				-1.4
1,304,356	+				-1.4
1,304,385	-				+0.1
1,304,484	-				+0.3
1,304,484	-				-0.8
1,304,484	-				-0.6