Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS20990

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,774,178	-		DDA3937_RS20985	0.68	-1.2
4,774,197	+		DDA3937_RS20985	0.71	+0.4
4,774,197	+		DDA3937_RS20985	0.71	-1.0
4,774,197	+		DDA3937_RS20985	0.71	-0.7
4,774,197	+		DDA3937_RS20985	0.71	+1.8
4,774,198	-		DDA3937_RS20985	0.71	-0.1
4,774,208	-		DDA3937_RS20985	0.72	+0.3
4,774,292	-		DDA3937_RS20985	0.84	+0.2
4,774,360	+				+1.1
4,774,361	-				+0.4
4,774,361	-				-0.4
4,774,361	-				-1.0
4,774,361	-				+0.2
4,774,361	-				-0.8
4,774,361	-				-0.3
4,774,361	-				-0.2
4,774,361	-				-0.7
4,774,361	-				+0.2
4,774,406	+				+0.1
4,774,406	+				-0.6
4,774,406	+				+1.4
4,774,406	+				-0.1
4,774,406	+				-0.3
4,774,406	+				-1.0
4,774,406	+				-0.5
4,774,407	-				+0.4
4,774,407	-				+0.8
4,774,407	-				-0.5
4,774,407	-				-0.7
4,774,409	+				-1.0
4,774,409	+				+0.3
4,774,409	+				+0.1
4,774,409	+				+0.6
4,774,410	-				+0.1
4,774,410	-				-0.4
4,774,410	-				+3.1
4,774,410	-				+1.4
4,774,410	-				-0.3
4,774,410	-				+0.3
4,774,419	+				-0.4
4,774,448	-				-0.2
4,774,448	-				-1.1
4,774,453	+				-0.1
4,774,453	+				-0.6
4,774,453	+				-0.3
4,774,453	+				+0.8
4,774,454	-				-0.3
4,774,454	-				-0.2
4,774,454	-				-0.5
4,774,454	-				+0.1
4,774,454	-				+0.6
4,774,454	-				-0.2
4,774,454	-				-1.8
4,774,457	+				+0.1
4,774,458	-				+0.1
4,774,458	-				-0.5
4,774,458	-				+0.1
4,774,458	-				-0.9
4,774,472	-				+0.4
4,774,485	+				+0.6
4,774,485	+				-1.1
4,774,485	+				-1.5
4,774,486	-				-0.2
4,774,486	-				-1.7
4,774,486	-				-0.6
4,774,486	-				-0.0
4,774,499	+				-0.7
4,774,499	+				+0.1
4,774,500	-				-0.7
4,774,500	-				+0.2
4,774,540	+				-1.5
4,774,629	+				+0.5
4,774,630	-				-0.7
4,774,630	-				-0.2
4,774,675	-				+0.2
4,774,689	-				-0.2
4,774,689	-				-1.4
4,774,692	-				-0.2
4,774,723	+				-0.6
4,774,723	+				+0.7
4,774,723	+				+0.8
4,774,724	-				-0.8
4,774,745	+				-0.4
4,774,746	-				-1.1
4,774,761	+				+1.1
4,774,761	+				-0.2
4,774,761	+				-0.2
4,774,761	+				-0.4
4,774,761	+				-0.2
4,774,762	-				-0.4
4,774,762	-				-1.2
4,774,762	-				-0.6
4,774,762	-				-0.5
4,774,762	-				-1.2
4,774,762	-				+0.3
4,774,762	-				-0.9
4,774,764	+				+0.2
4,774,764	+				+0.1
4,774,764	+				-0.0
4,774,764	+				+1.1
4,774,765	-				-1.6
4,774,765	-				+0.1
4,774,765	-				+1.7
4,774,765	-				-0.2
4,774,765	-				+0.7
4,774,765	-				-0.7
4,774,765	-				+0.8
4,774,765	-				-0.6
4,774,780	-				+0.3
4,775,069	-				-0.0
4,775,096	+				-0.1
4,775,096	+				-0.8
4,775,186	+				+0.1
4,775,187	-				+0.3
4,775,269	+				-0.0
4,775,293	+		DDA3937_RS20990	0.12	-0.9
4,775,336	-		DDA3937_RS20990	0.16	-1.2
4,775,336	-		DDA3937_RS20990	0.16	+0.2
4,775,371	+		DDA3937_RS20990	0.19	-1.0
4,775,372	-		DDA3937_RS20990	0.19	-1.2
4,775,372	-		DDA3937_RS20990	0.19	-1.0
4,775,482	-		DDA3937_RS20990	0.30	-0.2
4,775,594	-		DDA3937_RS20990	0.40	+0.2
4,775,712	+		DDA3937_RS20990	0.52	+0.1
4,775,873	-		DDA3937_RS20990	0.67	-0.0
4,776,220	+				-0.8
4,776,220	+				-0.2
4,776,220	+				-0.9
4,776,221	-				-0.2
4,776,221	-				+0.0
4,776,221	-				-0.4
4,776,224	-				-0.9
4,776,257	+				+0.1
4,776,257	+				-0.0
4,776,258	-				+0.1
4,776,258	-				+0.6
4,776,304	-				-0.5
4,776,324	-		DDA3937_RS20995	0.10	+0.7
4,776,372	+		DDA3937_RS20995	0.16	-0.2
4,776,372	+		DDA3937_RS20995	0.16	-0.3
4,776,372	+		DDA3937_RS20995	0.16	-1.2
4,776,372	+		DDA3937_RS20995	0.16	-0.6
4,776,372	+		DDA3937_RS20995	0.16	-1.2
4,776,373	-		DDA3937_RS20995	0.16	+0.0
4,776,373	-		DDA3937_RS20995	0.16	+0.3
4,776,373	-		DDA3937_RS20995	0.16	+0.4
4,776,447	-		DDA3937_RS20995	0.26	-0.3
4,776,447	-		DDA3937_RS20995	0.26	+1.1
4,776,504	+		DDA3937_RS20995	0.33	-0.3
4,776,504	+		DDA3937_RS20995	0.33	+0.2
4,776,716	+		DDA3937_RS20995	0.59	-0.1
4,776,716	+		DDA3937_RS20995	0.59	-0.6
4,776,716	+		DDA3937_RS20995	0.59	+0.8
4,776,716	+		DDA3937_RS20995	0.59	+0.3
4,776,716	+		DDA3937_RS20995	0.59	+0.3
4,776,716	+		DDA3937_RS20995	0.59	-1.3
4,776,716	+		DDA3937_RS20995	0.59	-0.8
4,776,717	-		DDA3937_RS20995	0.59	+0.8
4,776,717	-		DDA3937_RS20995	0.59	+0.3
4,776,717	-		DDA3937_RS20995	0.59	-0.5
4,776,932	+		DDA3937_RS20995	0.85	-0.9
4,776,960	-		DDA3937_RS20995	0.89	+0.2
4,776,960	-		DDA3937_RS20995	0.89	-0.7
4,776,960	-				+0.1
4,777,037	+				-0.2
4,777,037	+				-0.3
4,777,038	-				-0.9
4,777,076	+				-0.2
4,777,076	+				+0.4
4,777,076	+				+0.2
4,777,076	+				+1.2
4,777,076	+				-0.1
4,777,076	+				-0.2
4,777,076	+				-0.2
4,777,077	-				-0.8
4,777,077	-				-0.8
4,777,077	-				+2.7
4,777,077	-				-0.2
4,777,077	-				-1.1
4,777,084	+				-1.2
4,777,087	+				-0.5
4,777,114	-				+0.4
4,777,114	-				+0.1