Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS20735

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,712,154	+		DDA3937_RS20730	0.73	+0.3
4,712,173	+		DDA3937_RS20730	0.75	-0.9
4,712,177	+		DDA3937_RS20730	0.76	+1.3
4,712,189	-		DDA3937_RS20730	0.77	+0.6
4,712,192	+		DDA3937_RS20730	0.78	+0.6
4,712,269	+		DDA3937_RS20730	0.88	-1.5
4,712,270	-		DDA3937_RS20730	0.88	+0.1
4,712,270	-		DDA3937_RS20730	0.88	+0.8
4,712,284	+		DDA3937_RS20730	0.90	+1.1
4,712,316	+				-0.4
4,712,325	-				-0.7
4,712,355	-				-0.8
4,712,355	-				-1.6
4,712,416	+				+0.5
4,712,416	+				+0.5
4,712,417	-				+0.3
4,712,417	-				-0.0
4,712,418	+				-0.3
4,712,418	+				+0.3
4,712,418	+				-1.1
4,712,418	+				+1.2
4,712,419	-				-1.7
4,712,421	+				-0.3
4,712,422	-				+0.0
4,712,422	-				+0.6
4,712,429	+				-0.1
4,712,429	+				-0.1
4,712,429	+				+0.2
4,712,431	+				+0.3
4,712,441	+				+0.3
4,712,485	-				+0.6
4,712,560	-				-0.4
4,712,587	+				+0.5
4,712,588	-				-0.3
4,712,629	+				+0.7
4,712,665	+				-0.7
4,712,666	-				+0.4
4,712,701	+				+0.4
4,712,701	+				-0.9
4,712,701	+				-1.0
4,712,702	-				+0.1
4,712,702	-				-0.3
4,712,713	+				+0.0
4,712,713	+				+0.1
4,712,713	+				+0.1
4,712,713	+				+0.1
4,712,714	-				-1.0
4,712,718	-				+1.9
4,712,718	-				-0.1
4,712,735	+				-0.6
4,712,735	+				+0.5
4,712,736	-				+0.3
4,712,736	-				+0.5
4,712,736	-				+0.8
4,712,736	-				+0.3
4,712,736	-				-0.4
4,712,736	-				+0.4
4,712,737	+				-0.5
4,712,737	+				-0.7
4,712,737	+				+0.4
4,712,737	+				+0.2
4,712,738	-				-2.3
4,712,738	-				-0.7
4,712,846	+				-0.9
4,712,846	+				-3.2
4,712,847	-				+0.5
4,712,866	+				-1.2
4,712,867	-				-0.5
4,712,897	+				+0.5
4,712,897	+				-1.3
4,712,897	+				-0.5
4,712,898	-				-0.7
4,712,900	-				+1.5
4,712,960	-				+1.1
4,713,009	+				-1.1
4,713,070	+				+0.1
4,713,072	+				-0.3
4,713,073	-				-0.2
4,713,093	+				-0.9
4,713,093	+				-1.6
4,713,093	+				+0.7
4,713,094	-				+0.4
4,713,102	+				-0.2
4,713,102	+				+0.3
4,713,102	+				+0.1
4,713,103	-				-0.7
4,713,103	-				-0.4
4,713,103	-				+0.0
4,713,112	+				-0.4
4,713,123	+				+0.1
4,713,123	+				-0.5
4,713,123	+				-0.7
4,713,124	-				-0.3
4,713,124	-				-0.1
4,713,124	-				-0.4
4,713,199	-		DDA3937_RS20735	0.30	+0.1
4,713,261	+		DDA3937_RS20735	0.50	-1.0
4,713,307	+		DDA3937_RS20735	0.64	-1.6
4,713,309	+		DDA3937_RS20735	0.65	-1.9
4,713,310	-		DDA3937_RS20735	0.65	-0.4
4,713,310	-		DDA3937_RS20735	0.65	-0.5
4,713,310	-		DDA3937_RS20735	0.65	+0.6
4,713,471	+				-0.1
4,713,471	+				-1.9
4,713,471	+				-1.3
4,713,471	+				+0.1
4,713,471	+				-1.1
4,713,471	+				-0.2
4,713,471	+				-0.7
4,713,471	+				-0.3
4,713,472	-				-1.9
4,713,472	-				-0.9
4,713,472	-				-1.7
4,713,472	-				-0.8
4,713,472	-				-1.3
4,713,521	+				-2.6
4,713,522	-				+1.1
4,713,522	-				+0.1
4,713,544	-		DDA3937_RS20740	0.10	-0.0
4,713,565	-		DDA3937_RS20740	0.12	+2.1
4,713,600	-		DDA3937_RS20740	0.14	+0.7
4,713,619	+		DDA3937_RS20740	0.16	-0.3
4,713,731	+		DDA3937_RS20740	0.24	-0.7
4,713,731	+		DDA3937_RS20740	0.24	+0.2
4,713,731	+		DDA3937_RS20740	0.24	-0.1
4,713,731	+		DDA3937_RS20740	0.24	-0.8
4,713,731	+		DDA3937_RS20740	0.24	+0.3
4,713,731	+				+1.1
4,713,732	-		DDA3937_RS20740	0.24	-1.3
4,713,931	+		DDA3937_RS20740	0.39	-1.1
4,714,022	+		DDA3937_RS20740	0.46	-0.5
4,714,022	+		DDA3937_RS20740	0.46	-0.8
4,714,076	-		DDA3937_RS20740	0.50	+1.5
4,714,098	+		DDA3937_RS20740	0.52	+0.5
4,714,099	-		DDA3937_RS20740	0.52	+2.1
4,714,099	-		DDA3937_RS20740	0.52	+1.3
4,714,099	-		DDA3937_RS20740	0.52	-0.1
4,714,105	+		DDA3937_RS20740	0.53	+0.0
4,714,106	-		DDA3937_RS20740	0.53	+1.2
4,714,106	-		DDA3937_RS20740	0.53	-0.4
4,714,197	+		DDA3937_RS20740	0.59	+0.2
4,714,197	+		DDA3937_RS20740	0.59	+0.2
4,714,198	-		DDA3937_RS20740	0.60	-0.2
4,714,198	-		DDA3937_RS20740	0.60	-0.4
4,714,277	+		DDA3937_RS20740	0.66	+1.6