Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS19930

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,538,606	-				-0.3
4,539,309	+				+0.6
4,539,309	+				-0.2
4,539,309	+				+0.3
4,539,309	+				+0.8
4,539,309	+				-0.3
4,539,309	+				-0.0
4,539,310	-				-0.0
4,539,310	-				+2.2
4,539,318	+				-0.3
4,539,318	+				-0.6
4,539,318	+				+0.9
4,539,318	+				-2.2
4,539,319	-				-1.6
4,539,319	-				+0.1
4,539,319	-				+0.3
4,539,322	+				-1.0
4,539,322	+				-0.8
4,539,322	+				-0.5
4,539,322	+				-0.2
4,539,322	+				+0.7
4,539,322	+				+0.3
4,539,322	+				+1.0
4,539,322	+				-0.0
4,539,323	-				+0.4
4,539,323	-				+0.6
4,539,323	-				+1.4
4,539,323	-				-0.6
4,539,326	+				+0.4
4,539,326	+				+1.1
4,539,326	+				+0.0
4,539,326	+				-0.2
4,539,326	+				+0.4
4,539,326	+				-0.6
4,539,326	+				+0.7
4,539,326	+				-0.3
4,539,326	+				-0.5
4,539,326	+				-0.6
4,539,326	+				+0.3
4,539,326	+				+1.1
4,539,327	-				-0.9
4,539,327	-				-0.3
4,539,327	-				+0.7
4,539,327	-				+0.8
4,539,327	-				+0.8
4,539,327	-				+1.6
4,539,327	-				+1.0
4,539,327	-				+0.1
4,539,349	+				-1.0
4,539,349	+				+2.6
4,539,357	+				-0.0
4,539,358	-				+1.0
4,539,358	-				-0.2
4,539,360	+				-1.6
4,539,373	+				-0.0
4,539,373	+				-0.2
4,539,373	+				-0.7
4,539,373	+				-1.9
4,539,373	+				-0.9
4,539,374	-				-0.7
4,539,390	+				+0.4
4,539,390	+				+2.1
4,539,391	-				+0.8
4,539,391	-				-0.3
4,539,391	-				-1.0
4,539,391	-				+1.0
4,539,397	+				-0.6
4,539,403	+				-0.2
4,539,419	-				-2.0
4,539,567	-		DDA3937_RS19930	0.14	-1.6
4,539,890	-		DDA3937_RS19930	0.43	+0.3
4,540,157	-		DDA3937_RS19930	0.67	-1.0
4,540,157	-		DDA3937_RS19930	0.67	-2.3
4,540,235	+		DDA3937_RS19930	0.74	-0.6
4,540,235	+		DDA3937_RS19930	0.74	+0.2
4,540,235	+		DDA3937_RS19930	0.74	-1.0
4,540,235	+		DDA3937_RS19930	0.74	+0.6
4,540,308	-		DDA3937_RS19930	0.80	-1.6
4,540,431	+				-0.3
4,540,470	+				-0.0
4,540,471	-				-1.3
4,540,471	-				-0.6
4,540,544	+				-0.2
4,540,545	-				+0.6
4,540,580	+				-0.0
4,540,580	+				-2.3
4,540,612	+				-1.8
4,540,612	+				-0.3
4,540,637	-				+0.3
4,540,637	-				-1.0
4,540,831	+		DDA3937_RS19935	0.25	+0.3
4,540,832	-		DDA3937_RS19935	0.25	-1.6
4,540,894	+		DDA3937_RS19935	0.30	+1.0
4,540,895	-		DDA3937_RS19935	0.30	-0.1
4,540,895	-		DDA3937_RS19935	0.30	+0.8
4,540,895	-		DDA3937_RS19935	0.30	-2.2
4,540,895	-		DDA3937_RS19935	0.30	-0.4
4,540,951	+		DDA3937_RS19935	0.35	+1.0
4,540,952	-		DDA3937_RS19935	0.35	+1.8
4,540,952	-		DDA3937_RS19935	0.35	+0.6
4,541,141	-		DDA3937_RS19935	0.51	-0.9
4,541,213	+		DDA3937_RS19935	0.57	+0.6
4,541,214	-		DDA3937_RS19935	0.57	-0.9
4,541,304	+		DDA3937_RS19935	0.64	-0.0
4,541,393	+		DDA3937_RS19935	0.72	+1.3
4,541,393	+		DDA3937_RS19935	0.72	+0.3
4,541,394	-		DDA3937_RS19935	0.72	-0.0
4,541,430	-		DDA3937_RS19935	0.75	-2.9