Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS19640

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,468,730	-		DDA3937_RS19635	0.74	+1.3
4,469,224	+				-0.4
4,469,225	-				-0.3
4,469,225	-				-1.0
4,469,227	+				-0.5
4,469,227	+				-1.1
4,469,227	+				+1.1
4,469,345	+				-1.4
4,469,345	+				+0.2
4,469,408	+				+0.5
4,469,409	-				-1.0
4,469,409	-				-0.5
4,469,409	-				+0.6
4,469,411	+				+0.7
4,469,411	+				-0.6
4,469,415	-				+0.3
4,469,415	-				+1.1
4,469,417	+				-1.1
4,469,417	+				+0.2
4,469,417	+				+0.0
4,469,417	+				+0.3
4,469,418	-				+0.3
4,469,418	-				-0.4
4,469,418	-				-0.5
4,469,418	-				+0.6
4,469,418	-				-0.1
4,469,418	-				-0.3
4,469,418	-				-0.3
4,469,418	-				+0.0
4,469,428	-				-1.1
4,469,447	-				-0.1
4,469,477	+				+0.2
4,469,642	-				-0.3
4,469,644	-				-1.7
4,469,700	+		DDA3937_RS19640	0.17	-0.5
4,469,700	+		DDA3937_RS19640	0.17	-0.8
4,469,703	-		DDA3937_RS19640	0.17	+0.4
4,469,703	-		DDA3937_RS19640	0.17	-0.6
4,469,800	+		DDA3937_RS19640	0.37	-0.1
4,469,883	-		DDA3937_RS19640	0.53	-0.6
4,469,892	-		DDA3937_RS19640	0.55	-1.1
4,469,906	+		DDA3937_RS19640	0.58	-1.1
4,469,907	-		DDA3937_RS19640	0.58	-0.3
4,469,940	-		DDA3937_RS19640	0.64	-0.7
4,470,190	+				+0.6
4,470,194	+				-0.6
4,470,257	+				+0.1
4,470,257	+				-0.9
4,470,261	+				-0.8
4,470,262	-				-0.3
4,470,262	-				-1.5
4,470,293	+				+0.9
4,470,294	-				+1.2
4,470,294	-				+0.5
4,470,302	+				-0.4
4,470,306	+				-0.5
4,470,306	+				+0.4
4,470,307	-				+0.4
4,470,307	-				-0.2
4,470,309	-				-0.3
4,470,309	-				-0.9
4,470,309	-				-1.1
4,470,312	+				-1.3
4,470,313	-				-1.4
4,470,315	+				-0.3
4,470,316	-				+0.9
4,470,316	-				-0.3
4,470,334	+				+0.2
4,470,357	+				+0.6
4,470,371	+				+0.0
4,470,372	-				+0.1
4,470,380	+				-0.3
4,470,382	+				+0.1
4,470,438	+				-0.3
4,470,466	+		DDA3937_RS19645	0.11	+0.5
4,470,545	+		DDA3937_RS19645	0.21	+0.4
4,470,589	+		DDA3937_RS19645	0.27	-0.5
4,470,589	+		DDA3937_RS19645	0.27	-0.1
4,470,659	-		DDA3937_RS19645	0.36	-0.7
4,470,779	-		DDA3937_RS19645	0.52	-1.0