Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS19620

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,462,605	-		DDA3937_RS19615	0.42	-3.0
4,462,624	+		DDA3937_RS19615	0.43	-2.9
4,462,664	+		DDA3937_RS19615	0.46	-1.3
4,462,716	-		DDA3937_RS19615	0.50	-0.3
4,462,818	-		DDA3937_RS19615	0.57	-2.1
4,462,916	+		DDA3937_RS19615	0.64	-1.2
4,462,917	-		DDA3937_RS19615	0.64	-0.7
4,462,917	-		DDA3937_RS19615	0.64	-1.5
4,462,929	-		DDA3937_RS19615	0.65	-1.1
4,462,929	-		DDA3937_RS19615	0.65	-1.6
4,463,238	-				+0.9
4,463,264	-		DDA3937_RS19615	0.89	-2.5
4,463,264	-		DDA3937_RS19615	0.89	+0.5
4,463,312	+				-2.5
4,463,312	+				-1.1
4,463,313	-				-2.6
4,463,313	-				-2.9
4,463,326	+				-1.4
4,463,327	-				-0.6
4,463,327	-				-2.5
4,463,376	-				-1.9
4,463,472	+				-2.8
4,463,498	+		DDA3937_RS19620	0.12	-2.6
4,463,498	+		DDA3937_RS19620	0.12	-0.2
4,463,554	-		DDA3937_RS19620	0.19	-1.1
4,463,584	+		DDA3937_RS19620	0.24	-0.4
4,463,827	+		DDA3937_RS19620	0.57	-3.0
4,463,828	-		DDA3937_RS19620	0.57	-0.1
4,463,828	-		DDA3937_RS19620	0.57	+0.9
4,463,830	-		DDA3937_RS19620	0.58	-1.4
4,463,894	-		DDA3937_RS19620	0.67	-2.1
4,463,912	-		DDA3937_RS19620	0.69	-2.5
4,464,066	+				-1.4
4,464,176	-				+0.2
4,464,179	-				-0.0
4,464,179	-				-0.4
4,464,236	+				-1.4
4,464,236	+				-1.1
4,464,237	-				+0.2
4,464,237	-				-0.1
4,464,238	+				-0.8
4,464,238	+				-0.1
4,464,238	+				-0.5
4,464,238	+				-1.2
4,464,238	+				-1.9
4,464,238	+				-0.1
4,464,239	-				+0.2
4,464,239	-				+0.1
4,464,240	+				+0.5
4,464,240	+				+0.2
4,464,240	+				-1.3
4,464,240	+				-1.0
4,464,240	+				-2.1
4,464,240	+				-0.1
4,464,240	+				+1.2
4,464,241	-				-1.6
4,464,241	-				+0.5
4,464,241	-				-0.4
4,464,241	-				+0.4
4,464,241	-				+0.0
4,464,241	-				-0.6
4,464,282	+				-0.4
4,464,282	+				-0.4
4,464,336	+				-0.6
4,464,343	+				+0.5
4,464,343	+				-0.3
4,464,348	+				+2.9
4,464,348	+				+0.5
4,464,348	+				-0.3
4,464,348	+				-0.5
4,464,348	+				+0.1
4,464,348	+				-1.1
4,464,348	+				-0.5
4,464,349	-				-0.7
4,464,349	-				-0.5
4,464,366	+				+0.1
4,464,366	+				-0.1
4,464,368	+				-0.8
4,464,368	+				-1.9
4,464,377	+				-1.1
4,464,377	+				-0.4
4,464,378	-				+0.9
4,464,378	-				-0.6
4,464,378	-				+0.4
4,464,404	-				+0.9
4,464,404	-				+0.9
4,464,461	+				+1.5
4,464,461	+		DDA3937_RS19625	0.11	+0.4
4,464,461	+		DDA3937_RS19625	0.11	-0.1
4,464,461	+		DDA3937_RS19625	0.11	-0.7
4,464,462	-		DDA3937_RS19625	0.12	+0.0
4,464,462	-		DDA3937_RS19625	0.12	-0.6
4,464,462	-		DDA3937_RS19625	0.12	-0.4
4,464,462	-		DDA3937_RS19625	0.12	+0.3
4,464,545	+		DDA3937_RS19625	0.28	-0.5
4,464,546	-		DDA3937_RS19625	0.28	-0.2
4,464,551	+		DDA3937_RS19625	0.29	+0.5
4,464,551	+		DDA3937_RS19625	0.29	+0.2
4,464,551	+		DDA3937_RS19625	0.29	-1.1
4,464,552	-		DDA3937_RS19625	0.30	-1.6
4,464,632	+		DDA3937_RS19625	0.46	-0.4
4,464,632	+		DDA3937_RS19625	0.46	+0.1
4,464,633	-		DDA3937_RS19625	0.46	+1.9
4,464,657	+		DDA3937_RS19625	0.50	-0.5
4,464,738	-		DDA3937_RS19625	0.67	+0.5
4,464,753	-		DDA3937_RS19625	0.70	-0.1
4,464,823	+		DDA3937_RS19625	0.84	-1.6
4,464,823	+		DDA3937_RS19625	0.84	-0.6
4,464,848	+		DDA3937_RS19625	0.89	+0.4
4,464,848	+		DDA3937_RS19625	0.89	-0.3
4,464,849	-		DDA3937_RS19625	0.89	+0.5
4,464,849	-		DDA3937_RS19625	0.89	-0.3
4,464,856	+				-0.4
4,464,921	+				+0.2
4,464,977	+				-0.8
4,464,977	+				+0.0
4,464,977	+				-0.1
4,464,978	-				+0.2
4,464,978	-				-0.5
4,464,978	-				+0.0
4,464,978	-				+0.9
4,464,978	-				-0.8
4,465,009	-				-0.6
4,465,018	-				-0.9
4,465,022	+				+0.3
4,465,023	-				-0.3
4,465,023	-				-0.4
4,465,025	-				+0.5
4,465,025	-				-0.9
4,465,025	-				+0.4
4,465,026	+				-0.5
4,465,045	-				-0.2
4,465,045	-				-0.3
4,465,045	-				+0.9
4,465,045	-				-0.4
4,465,054	+				-0.2
4,465,055	-				-0.5
4,465,118	+				-1.8
4,465,118	+				-0.1
4,465,119	-				-2.4