Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS19600

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,457,038	+				+0.4
4,457,038	+				-0.6
4,457,038	+				+0.6
4,457,039	-				+0.6
4,457,039	-				+0.5
4,457,039	-				+1.5
4,457,042	-				+1.8
4,457,042	-				+1.9
4,457,042	-				+0.7
4,457,042	-				-0.1
4,457,086	+				+0.4
4,457,086	+				-2.4
4,457,086	+				-0.3
4,457,086	+				+2.3
4,457,086	+				-1.1
4,457,086	+				-0.6
4,457,087	-				-0.1
4,457,087	-				+1.0
4,457,087	-				-0.9
4,457,087	-				-0.9
4,457,087	-				-1.1
4,457,087	-				+0.7
4,457,087	-				-0.2
4,457,092	+				+0.1
4,457,136	+				+0.6
4,457,225	+				+0.0
4,457,225	+				-0.2
4,457,225	+				-1.1
4,457,226	-				-1.4
4,457,226	-				-1.6
4,457,226	-				-0.8
4,457,233	+				-1.6
4,457,233	+				-0.6
4,457,233	+				+1.5
4,457,276	+				-1.2
4,457,276	+				-0.5
4,457,276	+				+0.6
4,457,276	+				+0.3
4,457,276	+				+1.9
4,457,276	+				+1.1
4,457,276	+				-0.3
4,457,276	+				+0.2
4,457,277	-				-1.2
4,457,277	-				-0.8
4,457,277	-				+0.7
4,457,277	-				-1.1
4,457,277	-				-0.6
4,457,277	-				+0.9
4,457,277	-				-0.6
4,457,277	-				-0.5
4,457,277	-				+1.3
4,457,277	-				+1.5
4,457,277	-				+0.5
4,457,277	-				-0.3
4,457,277	-				-0.1
4,457,377	+		DDA3937_RS19595	0.12	-1.4
4,457,377	+		DDA3937_RS19595	0.12	+1.7
4,457,377	+				-0.1
4,457,377	+		DDA3937_RS19595	0.12	-1.1
4,457,378	-		DDA3937_RS19595	0.12	+0.1
4,457,464	+		DDA3937_RS19595	0.24	-0.2
4,457,494	+		DDA3937_RS19595	0.29	-1.8
4,457,494	+		DDA3937_RS19595	0.29	+0.7
4,457,495	-		DDA3937_RS19595	0.29	-0.9
4,457,507	-		DDA3937_RS19595	0.30	-0.1
4,457,532	+		DDA3937_RS19595	0.34	+0.2
4,457,536	+		DDA3937_RS19595	0.34	+0.5
4,457,537	-		DDA3937_RS19595	0.35	+0.2
4,457,537	-		DDA3937_RS19595	0.35	-0.2
4,457,537	-		DDA3937_RS19595	0.35	-0.6
4,457,537	-		DDA3937_RS19595	0.35	-1.4
4,457,537	-		DDA3937_RS19595	0.35	+2.4
4,457,537	-		DDA3937_RS19595	0.35	-1.3
4,457,628	+		DDA3937_RS19595	0.48	-0.8
4,457,628	+		DDA3937_RS19595	0.48	-0.1
4,457,629	-		DDA3937_RS19595	0.48	+1.1
4,457,633	+		DDA3937_RS19595	0.48	-0.7
4,457,634	-		DDA3937_RS19595	0.48	-0.8
4,457,672	+		DDA3937_RS19595	0.54	-0.4
4,457,672	+		DDA3937_RS19595	0.54	-0.6
4,457,672	+		DDA3937_RS19595	0.54	+0.1
4,457,673	-		DDA3937_RS19595	0.54	-0.5
4,457,673	-		DDA3937_RS19595	0.54	+0.9
4,457,673	-		DDA3937_RS19595	0.54	-0.3
4,457,673	-		DDA3937_RS19595	0.54	+0.3
4,457,705	+		DDA3937_RS19595	0.58	-0.2
4,457,705	+		DDA3937_RS19595	0.58	+0.9
4,457,706	-				+0.9
4,457,709	-		DDA3937_RS19595	0.59	-1.6
4,457,721	+		DDA3937_RS19595	0.61	+0.2
4,457,721	+		DDA3937_RS19595	0.61	+0.9
4,457,721	+		DDA3937_RS19595	0.61	+0.3
4,457,722	-		DDA3937_RS19595	0.61	+0.9
4,457,722	-		DDA3937_RS19595	0.61	-0.4
4,457,725	+		DDA3937_RS19595	0.61	+0.1
4,457,725	+		DDA3937_RS19595	0.61	-0.0
4,457,726	-		DDA3937_RS19595	0.61	-0.2
4,457,753	+		DDA3937_RS19595	0.65	-1.4
4,457,797	-		DDA3937_RS19595	0.71	+0.9
4,457,857	+		DDA3937_RS19595	0.80	-1.6
4,457,857	+		DDA3937_RS19595	0.80	-0.5
4,457,874	+		DDA3937_RS19595	0.82	+2.4
4,457,874	+		DDA3937_RS19595	0.82	+0.3
4,457,875	-		DDA3937_RS19595	0.83	-1.1
4,457,935	+				-1.6
4,457,935	+				+0.1
4,457,935	+				+0.1
4,457,936	-				-0.7
4,458,117	+		DDA3937_RS19600	0.30	+0.2
4,458,117	+		DDA3937_RS19600	0.30	+0.3
4,458,118	-		DDA3937_RS19600	0.30	-1.2
4,458,118	-		DDA3937_RS19600	0.30	-0.1
4,458,118	-		DDA3937_RS19600	0.30	-1.3
4,458,118	-		DDA3937_RS19600	0.30	+0.3
4,458,119	+		DDA3937_RS19600	0.30	-0.6
4,458,120	-		DDA3937_RS19600	0.30	-0.4
4,458,152	-		DDA3937_RS19600	0.38	-0.1
4,458,258	+		DDA3937_RS19600	0.64	-0.7
4,458,259	-		DDA3937_RS19600	0.64	-2.1
4,458,259	-		DDA3937_RS19600	0.64	-0.6
4,458,259	-		DDA3937_RS19600	0.64	-0.1
4,458,376	+				+0.7
4,458,377	-				-0.3
4,458,387	-				+0.1
4,458,391	-				-0.1
4,458,391	-				-0.6
4,458,391	-				+0.4
4,458,405	+				-0.2
4,458,405	+				-0.4
4,458,406	-				-1.1
4,458,406	-				+1.6
4,458,406	-				+0.1
4,458,406	-				-0.5
4,458,427	+				+0.3
4,458,427	+				-0.4
4,458,427	+				-1.2
4,458,427	+				+0.4
4,458,427	+				-1.0
4,458,428	-				-0.5
4,458,428	-				-1.1
4,458,428	-				-1.9
4,458,428	-				+0.4
4,458,428	-				-1.3
4,458,542	+				+0.4
4,458,543	-				-0.3
4,458,543	-				-0.6
4,458,543	-				-1.2
4,458,543	-				-0.7
4,458,543	-				+0.2
4,458,593	+				-0.3
4,458,593	+				-1.1
4,458,598	+				-0.5
4,458,646	+				-1.8
4,458,675	-				+0.2
4,458,756	-		DDA3937_RS19605	0.12	-0.1
4,459,073	+		DDA3937_RS19605	0.49	-1.1
4,459,283	+		DDA3937_RS19605	0.73	+0.2
4,459,283	+		DDA3937_RS19605	0.73	+1.2
4,459,284	-		DDA3937_RS19605	0.73	-0.9
4,459,284	-		DDA3937_RS19605	0.73	-0.1
4,459,284	-		DDA3937_RS19605	0.73	+0.3
4,459,307	+		DDA3937_RS19605	0.76	+1.4
4,459,308	-		DDA3937_RS19605	0.76	-1.9
4,459,308	-		DDA3937_RS19605	0.76	-0.5