Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS19510

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,437,347	+		DDA3937_RS19505	0.44	-0.7
4,437,347	+		DDA3937_RS19505	0.44	-0.4
4,437,348	-		DDA3937_RS19505	0.44	+0.0
4,437,353	+		DDA3937_RS19505	0.45	-0.6
4,437,354	-		DDA3937_RS19505	0.45	+0.2
4,437,369	+		DDA3937_RS19505	0.46	-0.7
4,437,369	+		DDA3937_RS19505	0.46	+0.6
4,437,370	-		DDA3937_RS19505	0.46	-1.8
4,437,370	-		DDA3937_RS19505	0.46	+0.5
4,437,392	+		DDA3937_RS19505	0.48	+0.6
4,437,392	+		DDA3937_RS19505	0.48	+0.7
4,437,393	-		DDA3937_RS19505	0.48	-0.3
4,437,393	-		DDA3937_RS19505	0.48	+0.4
4,437,393	-		DDA3937_RS19505	0.48	-0.1
4,437,456	+		DDA3937_RS19505	0.53	+1.3
4,437,456	+		DDA3937_RS19505	0.53	-1.4
4,437,456	+		DDA3937_RS19505	0.53	-0.3
4,437,456	+		DDA3937_RS19505	0.53	-0.4
4,437,456	+		DDA3937_RS19505	0.53	-0.4
4,437,457	-		DDA3937_RS19505	0.53	-0.4
4,437,457	-		DDA3937_RS19505	0.53	+0.4
4,437,457	-		DDA3937_RS19505	0.53	+0.8
4,437,457	-		DDA3937_RS19505	0.53	+0.4
4,437,457	-		DDA3937_RS19505	0.53	-0.5
4,437,457	-		DDA3937_RS19505	0.53	-0.3
4,437,528	+		DDA3937_RS19505	0.59	-0.1
4,437,529	-		DDA3937_RS19505	0.59	-0.1
4,437,549	-		DDA3937_RS19505	0.60	+0.8
4,437,633	+		DDA3937_RS19505	0.67	+1.3
4,437,633	+		DDA3937_RS19505	0.67	+0.7
4,437,633	+		DDA3937_RS19505	0.67	-0.7
4,437,634	-		DDA3937_RS19505	0.67	+0.6
4,437,634	-		DDA3937_RS19505	0.67	-0.1
4,437,634	-		DDA3937_RS19505	0.67	+0.2
4,437,994	+				-0.7
4,437,995	-				-0.8
4,437,995	-				+1.8
4,437,995	-				-0.3
4,437,995	-				-0.1
4,438,001	+				+0.1
4,438,001	+				-0.4
4,438,001	+				+0.6
4,438,001	+				-2.5
4,438,002	-				-0.4
4,438,002	-				-0.2
4,438,002	-				-0.7
4,438,002	-				+1.3
4,438,002	-				-0.3
4,438,004	+				+0.4
4,438,004	+				+0.9
4,438,004	+				+1.9
4,438,004	+				-0.3
4,438,005	-				-0.2
4,438,005	-				+0.9
4,438,005	-				+0.3
4,438,005	-				-1.5
4,438,005	-				-0.3
4,438,005	-				-1.0
4,438,048	-				-1.1
4,438,063	+				+0.6
4,438,064	-				+0.0
4,438,093	+				-0.0
4,438,093	+				+0.3
4,438,093	+				-0.7
4,438,108	+				+1.6
4,438,108	+				-1.1
4,438,108	+				+0.1
4,438,108	+				-0.7
4,438,108	+				+0.5
4,438,108	+				+0.9
4,438,108	+				+2.3
4,438,108	+				+0.1
4,438,108	+				+0.3
4,438,108	+				-0.4
4,438,109	-				+1.1
4,438,109	-				+0.3
4,438,117	-				+1.9
4,438,130	+				+0.1
4,438,130	+				+0.7
4,438,130	+				-0.3
4,438,130	+				+0.0
4,438,130	+				+0.2
4,438,130	+				+1.4
4,438,130	+				-1.3
4,438,130	+				-0.9
4,438,130	+				+0.3
4,438,130	+				-0.8
4,438,131	-				+0.5
4,438,131	-				+0.2
4,438,131	-				-0.2
4,438,131	-				-0.4
4,438,131	-				-0.2
4,438,131	-				-0.0
4,438,131	-				-0.0
4,438,133	+				+0.5
4,438,133	+				+0.2
4,438,134	-				+0.3
4,438,134	-				+0.2
4,438,134	-				+0.5
4,438,134	-				+0.4
4,438,144	+				-0.7
4,438,151	+				+0.6
4,438,151	+				+0.7
4,438,152	-				-0.2
4,438,152	-				-0.1
4,438,152	-				-0.7
4,438,162	+				+0.2
4,438,163	-				-0.6
4,438,169	+				+0.6
4,438,169	+				+0.8
4,438,169	+				+0.2
4,438,169	+				-0.4
4,438,169	+				+0.3
4,438,170	-				+0.8
4,438,170	-				-0.4
4,438,179	+				+0.8
4,438,186	+				-2.0
4,438,187	-				-0.1
4,438,294	+				+0.3
4,438,331	+				-0.2
4,438,338	+				-1.5
4,438,389	-		DDA3937_RS19510	0.10	+0.2
4,438,712	+		DDA3937_RS19510	0.67	-0.7
4,438,730	+		DDA3937_RS19510	0.70	-1.4
4,438,730	+		DDA3937_RS19510	0.70	-0.9
4,438,731	-		DDA3937_RS19510	0.70	-0.4
4,438,877	-				-1.7
4,438,890	+				-1.9
4,438,891	-				-1.2
4,438,891	-				+0.5
4,438,891	-				-0.5
4,438,939	-				-0.3
4,438,952	-				+1.2
4,438,952	-				+0.2
4,438,952	-				-0.4
4,439,027	+				+0.6
4,439,027	+				-0.5
4,439,027	+				-0.4
4,439,028	-				-1.2
4,439,028	-				+0.5
4,439,028	-				-1.7
4,439,028	-				+0.3
4,439,039	+				+2.3
4,439,040	-				-0.4
4,439,050	+				-1.1
4,439,089	-				-0.4
4,439,089	-				-0.8
4,439,089	-				-0.5
4,439,109	+				-0.4
4,439,110	-				-0.1
4,439,110	-				+0.9
4,439,144	+				+1.4
4,439,145	-				-1.4
4,439,145	-				-0.4
4,439,145	-				-0.2
4,439,145	-				-0.7
4,439,163	+				+0.7
4,439,163	+				-0.4
4,439,163	+				-1.9
4,439,163	+				-0.8
4,439,163	+				-1.0
4,439,163	+				-0.4
4,439,163	+				-0.5
4,439,164	-				+0.0
4,439,164	-				-0.2
4,439,285	+		DDA3937_RS19515	0.12	+0.5
4,439,285	+		DDA3937_RS19515	0.12	-0.5
4,439,285	+		DDA3937_RS19515	0.12	-0.7
4,439,285	+		DDA3937_RS19515	0.12	-0.7
4,439,648	+		DDA3937_RS19515	0.43	-0.7