Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS18690

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,270,855	+		DDA3937_RS18685	0.23	-1.0
4,270,943	+		DDA3937_RS18685	0.30	-0.6
4,270,960	+		DDA3937_RS18685	0.32	-0.7
4,270,960	+		DDA3937_RS18685	0.32	-2.3
4,270,960	+		DDA3937_RS18685	0.32	-1.5
4,270,960	+		DDA3937_RS18685	0.32	+0.5
4,270,961	-		DDA3937_RS18685	0.32	-0.5
4,270,965	-		DDA3937_RS18685	0.32	+0.1
4,270,965	-		DDA3937_RS18685	0.32	-1.2
4,270,987	-		DDA3937_RS18685	0.34	+0.5
4,271,006	+		DDA3937_RS18685	0.36	-0.5
4,271,006	+		DDA3937_RS18685	0.36	+0.9
4,271,006	+		DDA3937_RS18685	0.36	-0.8
4,271,007	-		DDA3937_RS18685	0.36	+0.4
4,271,079	-		DDA3937_RS18685	0.42	+0.5
4,271,115	-		DDA3937_RS18685	0.45	-1.8
4,271,119	-		DDA3937_RS18685	0.45	-0.1
4,271,134	+		DDA3937_RS18685	0.46	-0.7
4,271,135	-		DDA3937_RS18685	0.46	-0.9
4,271,135	-		DDA3937_RS18685	0.46	-1.2
4,271,282	+		DDA3937_RS18685	0.59	-1.0
4,271,310	+		DDA3937_RS18685	0.61	-0.7
4,271,411	+		DDA3937_RS18685	0.69	-1.7
4,271,445	+		DDA3937_RS18685	0.72	-1.5
4,271,445	+		DDA3937_RS18685	0.72	-0.9
4,271,446	-		DDA3937_RS18685	0.72	-0.7
4,271,487	+		DDA3937_RS18685	0.76	-1.4
4,271,502	+		DDA3937_RS18685	0.77	-1.1
4,271,503	-		DDA3937_RS18685	0.77	-1.6
4,271,503	-		DDA3937_RS18685	0.77	-0.7
4,271,503	-		DDA3937_RS18685	0.77	-1.5
4,271,546	+		DDA3937_RS18685	0.81	-1.1
4,271,547	-		DDA3937_RS18685	0.81	-0.9
4,271,600	-		DDA3937_RS18685	0.85	+0.1
4,271,619	+		DDA3937_RS18685	0.87	-0.7
4,271,643	-		DDA3937_RS18685	0.89	-2.7
4,271,653	-		DDA3937_RS18685	0.90	-1.7
4,271,653	-		DDA3937_RS18685	0.90	-1.3
4,271,735	-				-1.4
4,271,754	+				-1.0
4,271,875	-				+0.9
4,271,949	+		DDA3937_RS18690	0.11	-0.4
4,271,952	-		DDA3937_RS18690	0.11	+0.1
4,271,975	+		DDA3937_RS18690	0.13	-2.7
4,271,977	+		DDA3937_RS18690	0.13	+0.1
4,271,996	+		DDA3937_RS18690	0.15	-1.5
4,271,996	+		DDA3937_RS18690	0.15	+0.3
4,271,997	-		DDA3937_RS18690	0.15	-1.7
4,271,997	-		DDA3937_RS18690	0.15	-1.1
4,272,028	+		DDA3937_RS18690	0.18	-1.2
4,272,093	-				+0.9
4,272,262	+		DDA3937_RS18690	0.38	+0.0
4,272,262	+		DDA3937_RS18690	0.38	+0.9
4,272,262	+		DDA3937_RS18690	0.38	-0.1
4,272,262	+		DDA3937_RS18690	0.38	-0.5
4,272,263	-		DDA3937_RS18690	0.38	-1.2
4,272,444	+		DDA3937_RS18690	0.55	-0.7
4,272,445	-		DDA3937_RS18690	0.55	+0.5
4,272,466	+		DDA3937_RS18690	0.56	+0.5
4,272,467	-		DDA3937_RS18690	0.57	-0.5
4,272,535	+		DDA3937_RS18690	0.63	-2.6
4,272,596	+		DDA3937_RS18690	0.68	-0.0
4,272,614	-		DDA3937_RS18690	0.70	-0.7
4,272,614	-		DDA3937_RS18690	0.70	+0.7
4,272,697	-		DDA3937_RS18690	0.77	-1.5
4,272,701	+		DDA3937_RS18690	0.77	+0.9
4,272,743	+		DDA3937_RS18690	0.81	-1.8
4,272,816	+		DDA3937_RS18690	0.88	-1.5
4,272,884	-				+0.4
4,272,925	-				+0.2
4,272,941	+				-0.5
4,272,955	-				+0.1
4,272,966	+				-0.5
4,272,966	+				+0.4
4,272,966	+				+0.0
4,272,967	-				-0.4
4,272,967	-				+0.1
4,272,967	-				-0.4
4,272,967	-				-0.3
4,272,987	+				-0.4
4,273,018	-				+0.3
4,273,294	+		DDA3937_RS18695	0.29	-0.1
4,273,294	+		DDA3937_RS18695	0.29	+0.1
4,273,295	-		DDA3937_RS18695	0.29	+1.0
4,273,338	+				-0.7
4,273,338	+		DDA3937_RS18695	0.34	+0.3
4,273,338	+		DDA3937_RS18695	0.34	+0.0
4,273,338	+		DDA3937_RS18695	0.34	-0.7
4,273,339	-		DDA3937_RS18695	0.34	-0.2
4,273,339	-		DDA3937_RS18695	0.34	-1.7
4,273,342	+		DDA3937_RS18695	0.35	-0.4
4,273,352	-		DDA3937_RS18695	0.36	-2.1
4,273,352	-		DDA3937_RS18695	0.36	-0.5
4,273,352	-		DDA3937_RS18695	0.36	+0.3
4,273,352	-		DDA3937_RS18695	0.36	-0.6
4,273,383	+		DDA3937_RS18695	0.39	-0.1
4,273,384	-		DDA3937_RS18695	0.39	+0.7
4,273,384	-		DDA3937_RS18695	0.39	-0.5
4,273,384	-		DDA3937_RS18695	0.39	-0.7
4,273,408	+		DDA3937_RS18695	0.42	-0.5
4,273,427	+		DDA3937_RS18695	0.44	-0.5
4,273,427	+		DDA3937_RS18695	0.44	+0.1
4,273,428	-		DDA3937_RS18695	0.44	-0.1
4,273,461	+		DDA3937_RS18695	0.47	-0.6
4,273,462	-		DDA3937_RS18695	0.47	-0.4
4,273,462	-		DDA3937_RS18695	0.47	-1.5
4,273,574	+		DDA3937_RS18695	0.60	-0.1
4,273,574	+		DDA3937_RS18695	0.60	+0.5
4,273,574	+		DDA3937_RS18695	0.60	+0.5
4,273,644	+		DDA3937_RS18695	0.67	+0.4
4,273,644	+		DDA3937_RS18695	0.67	-1.0
4,273,656	+		DDA3937_RS18695	0.68	-0.0
4,273,666	+		DDA3937_RS18695	0.69	-0.5
4,273,761	-		DDA3937_RS18695	0.80	-0.2
4,273,874	+				-0.3
4,273,874	+				+0.0
4,273,875	-				-0.3
4,273,934	+				+0.4
4,273,934	+				-1.5
4,273,939	+				-0.6
4,273,939	+				-0.5
4,273,939	+				+0.3
4,273,939	+				+1.1
4,273,939	+				+1.5
4,273,939	+				-0.2
4,273,939	+				-0.2
4,273,940	-				-0.3
4,273,940	-				-1.1
4,273,940	-				+1.0
4,273,940	-				-2.3
4,273,940	-				-0.3
4,273,940	-				-0.5
4,273,940	-				-0.3
4,273,940	-				-0.1
4,273,940	-				-1.1
4,273,940	-				+0.1
4,273,940	-				-0.7
4,273,940	-				-0.7
4,273,940	-				+0.4
4,273,940	-				-0.2
4,273,940	-				-0.5
4,273,940	-				+0.2