Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS18685

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,269,620	+				+0.1
4,269,620	+				-0.4
4,269,621	-				+0.3
4,269,624	+				-0.2
4,269,628	+				-0.9
4,269,628	+				-1.0
4,269,629	-				-2.0
4,269,793	+		DDA3937_RS18680	0.16	-0.1
4,269,818	-		DDA3937_RS18680	0.19	+0.1
4,269,843	-		DDA3937_RS18680	0.21	+0.1
4,269,930	+		DDA3937_RS18680	0.31	-2.9
4,269,988	+		DDA3937_RS18680	0.37	-0.6
4,269,998	+		DDA3937_RS18680	0.38	+1.4
4,270,085	-				+0.1
4,270,089	+		DDA3937_RS18680	0.47	-2.5
4,270,089	+		DDA3937_RS18680	0.47	-1.4
4,270,089	+		DDA3937_RS18680	0.47	+0.4
4,270,121	-				+0.3
4,270,161	+		DDA3937_RS18680	0.55	-1.2
4,270,214	-				-1.5
4,270,285	+		DDA3937_RS18680	0.68	+0.2
4,270,290	+		DDA3937_RS18680	0.69	+0.9
4,270,362	-		DDA3937_RS18680	0.77	-0.9
4,270,594	+				-1.5
4,270,594	+				-1.4
4,270,700	-		DDA3937_RS18685	0.10	-1.1
4,270,705	+		DDA3937_RS18685	0.11	-2.3
4,270,706	-		DDA3937_RS18685	0.11	-1.1
4,270,751	+		DDA3937_RS18685	0.14	-0.6
4,270,752	-		DDA3937_RS18685	0.14	-1.7
4,270,752	-		DDA3937_RS18685	0.14	-0.9
4,270,792	+		DDA3937_RS18685	0.18	-1.3
4,270,792	+		DDA3937_RS18685	0.18	-0.1
4,270,793	-		DDA3937_RS18685	0.18	-0.7
4,270,819	-		DDA3937_RS18685	0.20	-0.5
4,270,855	+		DDA3937_RS18685	0.23	-1.0
4,270,943	+		DDA3937_RS18685	0.30	-0.6
4,270,960	+		DDA3937_RS18685	0.32	-0.7
4,270,960	+		DDA3937_RS18685	0.32	-2.3
4,270,960	+		DDA3937_RS18685	0.32	-1.5
4,270,960	+		DDA3937_RS18685	0.32	+0.5
4,270,961	-		DDA3937_RS18685	0.32	-0.5
4,270,965	-		DDA3937_RS18685	0.32	+0.1
4,270,965	-		DDA3937_RS18685	0.32	-1.2
4,270,987	-		DDA3937_RS18685	0.34	+0.5
4,271,006	+		DDA3937_RS18685	0.36	-0.5
4,271,006	+		DDA3937_RS18685	0.36	+0.9
4,271,006	+		DDA3937_RS18685	0.36	-0.8
4,271,007	-		DDA3937_RS18685	0.36	+0.4
4,271,079	-		DDA3937_RS18685	0.42	+0.5
4,271,115	-		DDA3937_RS18685	0.45	-1.8
4,271,119	-		DDA3937_RS18685	0.45	-0.1
4,271,134	+		DDA3937_RS18685	0.46	-0.7
4,271,135	-		DDA3937_RS18685	0.46	-0.9
4,271,135	-		DDA3937_RS18685	0.46	-1.2
4,271,282	+		DDA3937_RS18685	0.59	-1.0
4,271,310	+		DDA3937_RS18685	0.61	-0.7
4,271,411	+		DDA3937_RS18685	0.69	-1.7
4,271,445	+		DDA3937_RS18685	0.72	-1.5
4,271,445	+		DDA3937_RS18685	0.72	-0.9
4,271,446	-		DDA3937_RS18685	0.72	-0.7
4,271,487	+		DDA3937_RS18685	0.76	-1.4
4,271,502	+		DDA3937_RS18685	0.77	-1.1
4,271,503	-		DDA3937_RS18685	0.77	-1.6
4,271,503	-		DDA3937_RS18685	0.77	-0.7
4,271,503	-		DDA3937_RS18685	0.77	-1.5
4,271,546	+		DDA3937_RS18685	0.81	-1.1
4,271,547	-		DDA3937_RS18685	0.81	-0.9
4,271,600	-		DDA3937_RS18685	0.85	+0.1
4,271,619	+		DDA3937_RS18685	0.87	-0.7
4,271,643	-		DDA3937_RS18685	0.89	-2.7
4,271,653	-		DDA3937_RS18685	0.90	-1.7
4,271,653	-		DDA3937_RS18685	0.90	-1.3
4,271,735	-				-1.4
4,271,754	+				-1.0
4,271,875	-				+0.9
4,271,949	+		DDA3937_RS18690	0.11	-0.4
4,271,952	-		DDA3937_RS18690	0.11	+0.1
4,271,975	+		DDA3937_RS18690	0.13	-2.7
4,271,977	+		DDA3937_RS18690	0.13	+0.1
4,271,996	+		DDA3937_RS18690	0.15	-1.5
4,271,996	+		DDA3937_RS18690	0.15	+0.3
4,271,997	-		DDA3937_RS18690	0.15	-1.7
4,271,997	-		DDA3937_RS18690	0.15	-1.1
4,272,028	+		DDA3937_RS18690	0.18	-1.2
4,272,093	-				+0.9
4,272,262	+		DDA3937_RS18690	0.38	+0.0
4,272,262	+		DDA3937_RS18690	0.38	+0.9
4,272,262	+		DDA3937_RS18690	0.38	-0.1
4,272,262	+		DDA3937_RS18690	0.38	-0.5
4,272,263	-		DDA3937_RS18690	0.38	-1.2
4,272,444	+		DDA3937_RS18690	0.55	-0.7
4,272,445	-		DDA3937_RS18690	0.55	+0.5
4,272,466	+		DDA3937_RS18690	0.56	+0.5
4,272,467	-		DDA3937_RS18690	0.57	-0.5
4,272,535	+		DDA3937_RS18690	0.63	-2.6
4,272,596	+		DDA3937_RS18690	0.68	-0.0
4,272,614	-		DDA3937_RS18690	0.70	-0.7
4,272,614	-		DDA3937_RS18690	0.70	+0.7
4,272,697	-		DDA3937_RS18690	0.77	-1.5
4,272,701	+		DDA3937_RS18690	0.77	+0.9
4,272,743	+		DDA3937_RS18690	0.81	-1.8