Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS18665

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,265,967	+		DDA3937_RS18660	0.32	-1.2
4,265,967	+		DDA3937_RS18660	0.32	-0.1
4,265,967	+		DDA3937_RS18660	0.32	-0.4
4,265,968	-		DDA3937_RS18660	0.32	-0.6
4,265,968	-		DDA3937_RS18660	0.32	-0.0
4,265,969	+		DDA3937_RS18660	0.32	-0.3
4,265,969	+		DDA3937_RS18660	0.32	+0.2
4,265,970	-		DDA3937_RS18660	0.32	-0.4
4,265,983	+		DDA3937_RS18660	0.33	-1.2
4,265,983	+		DDA3937_RS18660	0.33	-0.1
4,265,983	+		DDA3937_RS18660	0.33	-0.5
4,265,983	+		DDA3937_RS18660	0.33	-0.7
4,265,983	+		DDA3937_RS18660	0.33	-1.5
4,265,984	-		DDA3937_RS18660	0.33	-1.1
4,265,984	-		DDA3937_RS18660	0.33	-0.3
4,265,984	-		DDA3937_RS18660	0.33	-0.7
4,265,994	+		DDA3937_RS18660	0.34	-0.1
4,265,994	+		DDA3937_RS18660	0.34	+0.0
4,265,994	+		DDA3937_RS18660	0.34	+0.9
4,265,994	+		DDA3937_RS18660	0.34	-1.1
4,265,994	+		DDA3937_RS18660	0.34	-0.9
4,265,995	-		DDA3937_RS18660	0.34	-2.3
4,265,995	-		DDA3937_RS18660	0.34	-0.4
4,265,995	-		DDA3937_RS18660	0.34	-0.6
4,265,995	-		DDA3937_RS18660	0.34	-0.6
4,265,995	-		DDA3937_RS18660	0.34	+0.3
4,265,995	-		DDA3937_RS18660	0.34	-0.1
4,266,007	+		DDA3937_RS18660	0.35	-0.5
4,266,007	+		DDA3937_RS18660	0.35	-0.1
4,266,007	+		DDA3937_RS18660	0.35	-0.4
4,266,007	+		DDA3937_RS18660	0.35	-1.5
4,266,007	+		DDA3937_RS18660	0.35	-1.8
4,266,007	+		DDA3937_RS18660	0.35	+0.1
4,266,007	+				+0.9
4,266,007	+		DDA3937_RS18660	0.35	-1.5
4,266,007	+		DDA3937_RS18660	0.35	-1.5
4,266,007	+		DDA3937_RS18660	0.35	+1.1
4,266,007	+		DDA3937_RS18660	0.35	+0.1
4,266,007	+		DDA3937_RS18660	0.35	-1.2
4,266,015	+		DDA3937_RS18660	0.35	+0.2
4,266,015	+		DDA3937_RS18660	0.35	+0.9
4,266,015	+		DDA3937_RS18660	0.35	-0.5
4,266,015	+		DDA3937_RS18660	0.35	-0.7
4,266,016	-		DDA3937_RS18660	0.35	-0.1
4,266,016	-		DDA3937_RS18660	0.35	+0.0
4,266,016	-		DDA3937_RS18660	0.35	-0.6
4,266,055	+		DDA3937_RS18660	0.38	-0.5
4,266,056	-		DDA3937_RS18660	0.38	-0.4
4,266,141	-		DDA3937_RS18660	0.44	-0.8
4,266,141	-		DDA3937_RS18660	0.44	-0.9
4,266,148	+		DDA3937_RS18660	0.45	-1.1
4,266,148	+		DDA3937_RS18660	0.45	-0.1
4,266,149	-		DDA3937_RS18660	0.45	-0.5
4,266,149	-		DDA3937_RS18660	0.45	-0.1
4,266,149	-		DDA3937_RS18660	0.45	-1.5
4,266,168	-		DDA3937_RS18660	0.46	+0.0
4,266,168	-		DDA3937_RS18660	0.46	-0.2
4,266,168	-		DDA3937_RS18660	0.46	-0.9
4,266,168	-		DDA3937_RS18660	0.46	+0.9
4,266,168	-		DDA3937_RS18660	0.46	-0.1
4,266,168	-		DDA3937_RS18660	0.46	-0.2
4,266,218	+		DDA3937_RS18660	0.50	-0.5
4,266,218	+		DDA3937_RS18660	0.50	-0.1
4,266,218	+		DDA3937_RS18660	0.50	-2.5
4,266,218	+		DDA3937_RS18660	0.50	-0.6
4,266,218	+		DDA3937_RS18660	0.50	-0.1
4,266,218	+		DDA3937_RS18660	0.50	+0.4
4,266,219	-		DDA3937_RS18660	0.50	+0.1
4,266,219	-		DDA3937_RS18660	0.50	-0.8
4,266,242	+		DDA3937_RS18660	0.52	-0.3
4,266,242	+		DDA3937_RS18660	0.52	-0.1
4,266,242	+		DDA3937_RS18660	0.52	-0.9
4,266,242	+		DDA3937_RS18660	0.52	-0.2
4,266,242	+		DDA3937_RS18660	0.52	-0.3
4,266,243	-		DDA3937_RS18660	0.52	-0.5
4,266,243	-		DDA3937_RS18660	0.52	-0.5
4,266,294	+		DDA3937_RS18660	0.55	-1.1
4,266,295	-		DDA3937_RS18660	0.56	-0.3
4,266,299	+		DDA3937_RS18660	0.56	-1.2
4,266,299	+		DDA3937_RS18660	0.56	-1.0
4,266,299	+		DDA3937_RS18660	0.56	-1.0
4,266,299	+		DDA3937_RS18660	0.56	+0.3
4,266,300	-		DDA3937_RS18660	0.56	-2.3
4,266,325	-		DDA3937_RS18660	0.58	+1.7
4,266,325	-		DDA3937_RS18660	0.58	-0.5
4,266,325	-		DDA3937_RS18660	0.58	+0.3
4,266,325	-		DDA3937_RS18660	0.58	+0.4
4,266,327	+		DDA3937_RS18660	0.58	-0.1
4,266,327	+		DDA3937_RS18660	0.58	-1.5
4,266,327	+		DDA3937_RS18660	0.58	-0.5
4,266,327	+		DDA3937_RS18660	0.58	+1.2
4,266,327	+		DDA3937_RS18660	0.58	+0.3
4,266,327	+		DDA3937_RS18660	0.58	-1.5
4,266,327	+		DDA3937_RS18660	0.58	+0.6
4,266,327	+		DDA3937_RS18660	0.58	-0.7
4,266,327	+		DDA3937_RS18660	0.58	-0.3
4,266,327	+		DDA3937_RS18660	0.58	-1.1
4,266,328	-		DDA3937_RS18660	0.58	-1.4
4,266,328	-		DDA3937_RS18660	0.58	-0.6
4,266,328	-		DDA3937_RS18660	0.58	-0.1
4,266,328	-		DDA3937_RS18660	0.58	-2.3
4,266,328	-		DDA3937_RS18660	0.58	-0.5
4,266,328	-		DDA3937_RS18660	0.58	-0.6
4,266,328	-		DDA3937_RS18660	0.58	-0.4
4,266,328	-		DDA3937_RS18660	0.58	-0.7
4,266,328	-		DDA3937_RS18660	0.58	-0.9
4,266,328	-				+1.9
4,266,425	+		DDA3937_RS18660	0.65	-1.0
4,266,508	-		DDA3937_RS18660	0.71	-0.4
4,266,508	-		DDA3937_RS18660	0.71	-0.3
4,266,534	+		DDA3937_RS18660	0.73	+0.2
4,266,534	+		DDA3937_RS18660	0.73	-0.5
4,266,534	+		DDA3937_RS18660	0.73	+1.1
4,266,535	-		DDA3937_RS18660	0.73	-1.3
4,266,567	-		DDA3937_RS18660	0.75	-1.5
4,266,596	-		DDA3937_RS18660	0.77	-0.9
4,266,596	-		DDA3937_RS18660	0.77	+1.9
4,266,596	-		DDA3937_RS18660	0.77	-1.1
4,266,649	+		DDA3937_RS18660	0.81	-0.3
4,266,650	-		DDA3937_RS18660	0.81	-0.3
4,266,724	-		DDA3937_RS18660	0.87	-0.1
4,266,751	-		DDA3937_RS18660	0.89	+1.9
4,266,774	+				+1.2
4,266,836	-				+0.9
4,266,893	+				+1.0
4,266,896	+				-0.3
4,266,906	+				+0.0
4,266,936	+				-1.2
4,266,938	+				-0.1
4,266,938	+				-0.5
4,266,938	+				-1.5
4,266,938	+				+0.1
4,266,938	+				-0.1
4,266,939	-				-0.1
4,266,969	+				-2.1
4,266,970	-				-0.1
4,266,989	+				-0.6
4,266,990	-				+0.9
4,267,034	-				-0.6
4,267,036	+				-1.5
4,267,057	+		DDA3937_RS18665	0.10	-1.1
4,267,057	+		DDA3937_RS18665	0.10	-2.0
4,267,057	+		DDA3937_RS18665	0.10	-1.4
4,267,058	-		DDA3937_RS18665	0.10	-0.5
4,267,058	-		DDA3937_RS18665	0.10	-0.8
4,267,058	-		DDA3937_RS18665	0.10	-1.6
4,267,060	+		DDA3937_RS18665	0.11	-1.2
4,267,083	-		DDA3937_RS18665	0.13	-0.1
4,267,124	+		DDA3937_RS18665	0.16	-0.7
4,267,124	+		DDA3937_RS18665	0.16	-0.1
4,267,141	+		DDA3937_RS18665	0.18	-2.3
4,267,141	+		DDA3937_RS18665	0.18	-0.8
4,267,141	+		DDA3937_RS18665	0.18	-0.9
4,267,142	-		DDA3937_RS18665	0.18	+0.1
4,267,159	+		DDA3937_RS18665	0.19	-2.6
4,267,160	-		DDA3937_RS18665	0.20	-1.5
4,267,162	+		DDA3937_RS18665	0.20	-1.7
4,267,162	+		DDA3937_RS18665	0.20	-0.7
4,267,162	+		DDA3937_RS18665	0.20	+0.3
4,267,191	-		DDA3937_RS18665	0.22	-0.7
4,267,197	+		DDA3937_RS18665	0.23	-1.7
4,267,198	-		DDA3937_RS18665	0.23	-1.8
4,267,198	-		DDA3937_RS18665	0.23	-0.9
4,267,241	+		DDA3937_RS18665	0.27	-0.3
4,267,241	+		DDA3937_RS18665	0.27	-1.4
4,267,242	-		DDA3937_RS18665	0.27	-1.4
4,267,242	-		DDA3937_RS18665	0.27	-0.5
4,267,288	+		DDA3937_RS18665	0.31	-0.5
4,267,289	-		DDA3937_RS18665	0.31	-0.6
4,267,326	-		DDA3937_RS18665	0.34	+1.3
4,267,349	+		DDA3937_RS18665	0.36	-1.7
4,267,349	+		DDA3937_RS18665	0.36	+0.2
4,267,350	-		DDA3937_RS18665	0.37	-1.3
4,267,420	+		DDA3937_RS18665	0.43	-0.8
4,267,420	+		DDA3937_RS18665	0.43	-0.6
4,267,421	-		DDA3937_RS18665	0.43	-1.0
4,267,427	+		DDA3937_RS18665	0.43	+0.3
4,267,427	+		DDA3937_RS18665	0.43	-0.7
4,267,427	+		DDA3937_RS18665	0.43	-1.0
4,267,427	+		DDA3937_RS18665	0.43	-1.0
4,267,428	-		DDA3937_RS18665	0.44	-0.7
4,267,434	-		DDA3937_RS18665	0.44	+0.9
4,267,442	-		DDA3937_RS18665	0.45	-0.7
4,267,446	+		DDA3937_RS18665	0.45	-3.1
4,267,446	+		DDA3937_RS18665	0.45	-0.0
4,267,447	-		DDA3937_RS18665	0.45	-1.1
4,267,451	+		DDA3937_RS18665	0.46	-1.3
4,267,451	+		DDA3937_RS18665	0.46	-0.4
4,267,451	+		DDA3937_RS18665	0.46	-1.6
4,267,452	-		DDA3937_RS18665	0.46	-0.9
4,267,463	+		DDA3937_RS18665	0.47	-0.7
4,267,464	-		DDA3937_RS18665	0.47	-1.3
4,267,464	-		DDA3937_RS18665	0.47	+0.1
4,267,468	+		DDA3937_RS18665	0.47	-0.7
4,267,468	+		DDA3937_RS18665	0.47	-2.0
4,267,468	+		DDA3937_RS18665	0.47	-2.9
4,267,468	+		DDA3937_RS18665	0.47	-0.1
4,267,468	+		DDA3937_RS18665	0.47	-1.1
4,267,468	+		DDA3937_RS18665	0.47	-0.9
4,267,468	+		DDA3937_RS18665	0.47	-1.7
4,267,468	+		DDA3937_RS18665	0.47	-1.3
4,267,468	+		DDA3937_RS18665	0.47	-0.6
4,267,468	+		DDA3937_RS18665	0.47	+0.2
4,267,468	+		DDA3937_RS18665	0.47	-1.0
4,267,468	+		DDA3937_RS18665	0.47	-0.1
4,267,469	-		DDA3937_RS18665	0.47	-0.3
4,267,469	-		DDA3937_RS18665	0.47	-0.8
4,267,469	-		DDA3937_RS18665	0.47	-0.8
4,267,469	-		DDA3937_RS18665	0.47	-1.6
4,267,469	-		DDA3937_RS18665	0.47	-0.0
4,267,469	-		DDA3937_RS18665	0.47	+0.5
4,267,469	-		DDA3937_RS18665	0.47	-0.9
4,267,469	-		DDA3937_RS18665	0.47	-1.1
4,267,469	-		DDA3937_RS18665	0.47	-0.7
4,267,469	-		DDA3937_RS18665	0.47	-1.0
4,267,469	-		DDA3937_RS18665	0.47	-0.7
4,267,472	+		DDA3937_RS18665	0.47	-0.6
4,267,472	+		DDA3937_RS18665	0.47	-1.5
4,267,472	+		DDA3937_RS18665	0.47	-0.9
4,267,472	+		DDA3937_RS18665	0.47	-1.6
4,267,472	+		DDA3937_RS18665	0.47	-0.4
4,267,472	+		DDA3937_RS18665	0.47	-0.3
4,267,472	+		DDA3937_RS18665	0.47	-0.8
4,267,472	+		DDA3937_RS18665	0.47	+1.4
4,267,472	+		DDA3937_RS18665	0.47	-1.3
4,267,472	+		DDA3937_RS18665	0.47	-0.1
4,267,472	+		DDA3937_RS18665	0.47	-0.7
4,267,473	-		DDA3937_RS18665	0.48	+0.0
4,267,473	-		DDA3937_RS18665	0.48	-0.3
4,267,473	-		DDA3937_RS18665	0.48	-0.7
4,267,473	-		DDA3937_RS18665	0.48	-0.3
4,267,473	-		DDA3937_RS18665	0.48	-1.1
4,267,473	-		DDA3937_RS18665	0.48	-0.1
4,267,473	-		DDA3937_RS18665	0.48	-2.1
4,267,589	+		DDA3937_RS18665	0.58	-1.2
4,267,589	+		DDA3937_RS18665	0.58	-0.7
4,267,589	+		DDA3937_RS18665	0.58	-2.1
4,267,589	+		DDA3937_RS18665	0.58	-0.8
4,267,590	-		DDA3937_RS18665	0.58	-0.6
4,267,590	-		DDA3937_RS18665	0.58	-1.0
4,267,590	-		DDA3937_RS18665	0.58	-1.3
4,267,590	-		DDA3937_RS18665	0.58	-1.3
4,267,637	+		DDA3937_RS18665	0.62	-1.7
4,267,637	+		DDA3937_RS18665	0.62	+0.3
4,267,638	-		DDA3937_RS18665	0.62	-1.0
4,267,638	-		DDA3937_RS18665	0.62	+0.4
4,267,638	-		DDA3937_RS18665	0.62	+0.5
4,267,638	-		DDA3937_RS18665	0.62	-0.0
4,267,710	-		DDA3937_RS18665	0.69	-0.1
4,267,711	+		DDA3937_RS18665	0.69	+0.3
4,267,711	+		DDA3937_RS18665	0.69	-0.7
4,267,711	+		DDA3937_RS18665	0.69	-1.1
4,267,712	-		DDA3937_RS18665	0.69	-0.7
4,267,712	-		DDA3937_RS18665	0.69	-0.5
4,267,712	-		DDA3937_RS18665	0.69	-2.1
4,267,712	-		DDA3937_RS18665	0.69	-0.5
4,267,712	-		DDA3937_RS18665	0.69	-2.0
4,267,716	+		DDA3937_RS18665	0.69	-0.9
4,267,716	+		DDA3937_RS18665	0.69	-1.0
4,267,716	+		DDA3937_RS18665	0.69	-0.5
4,267,716	+		DDA3937_RS18665	0.69	-1.3
4,267,716	+		DDA3937_RS18665	0.69	+0.4
4,267,716	+		DDA3937_RS18665	0.69	-2.3
4,267,716	+		DDA3937_RS18665	0.69	+1.6
4,267,716	+		DDA3937_RS18665	0.69	-0.1
4,267,716	+		DDA3937_RS18665	0.69	-3.2
4,267,717	-		DDA3937_RS18665	0.69	-0.1
4,267,717	-		DDA3937_RS18665	0.69	-0.8
4,267,717	-		DDA3937_RS18665	0.69	-0.8
4,267,717	-		DDA3937_RS18665	0.69	-1.3
4,267,717	-		DDA3937_RS18665	0.69	-1.5
4,267,717	-		DDA3937_RS18665	0.69	+0.2
4,267,717	-		DDA3937_RS18665	0.69	+0.3
4,267,820	-		DDA3937_RS18665	0.79	+0.9
4,267,820	-		DDA3937_RS18665	0.79	-0.4
4,267,839	+		DDA3937_RS18665	0.80	+0.1
4,267,839	+		DDA3937_RS18665	0.80	-1.1
4,267,840	-		DDA3937_RS18665	0.80	-1.5
4,267,840	-		DDA3937_RS18665	0.80	+0.6
4,267,840	-		DDA3937_RS18665	0.80	+0.2
4,267,840	-		DDA3937_RS18665	0.80	-1.3
4,267,872	-		DDA3937_RS18665	0.83	-1.1
4,267,890	+		DDA3937_RS18665	0.85	-1.4
4,267,891	-		DDA3937_RS18665	0.85	-1.2
4,267,891	-		DDA3937_RS18665	0.85	-1.6
4,267,891	-		DDA3937_RS18665	0.85	-2.6
4,267,891	-		DDA3937_RS18665	0.85	-0.1
4,267,894	+		DDA3937_RS18665	0.85	-1.6
4,267,894	+				+1.1
4,267,894	+		DDA3937_RS18665	0.85	-0.5
4,267,894	+		DDA3937_RS18665	0.85	-1.9
4,267,894	+		DDA3937_RS18665	0.85	-1.0
4,267,895	-		DDA3937_RS18665	0.85	+0.6
4,267,895	-		DDA3937_RS18665	0.85	-0.6
4,267,929	+		DDA3937_RS18665	0.88	-0.4
4,267,929	+		DDA3937_RS18665	0.88	-1.9
4,267,929	+		DDA3937_RS18665	0.88	-1.7
4,267,930	-		DDA3937_RS18665	0.88	-1.1
4,267,985	+				+1.9
4,267,985	+				-0.6
4,267,986	-				-0.7
4,268,003	-				-2.3
4,268,040	+				+0.2
4,268,041	-				+0.4
4,268,041	-				+0.1
4,268,041	-				+0.7
4,268,046	+				+0.3
4,268,047	-				+0.1
4,268,047	-				-0.1
4,268,047	-				-1.8
4,268,052	+				-0.6
4,268,052	+				+0.3
4,268,052	+				+0.4
4,268,057	+				+0.6
4,268,057	+				+0.9
4,268,086	+				-0.6
4,268,086	+				+0.1
4,268,090	-				+0.3
4,268,122	-				+0.1
4,268,129	-				-0.4
4,268,129	-				-0.5
4,268,184	+				-1.5
4,268,203	-		DDA3937_RS18670	0.10	-0.7
4,268,250	-		DDA3937_RS18670	0.16	-1.1
4,268,330	-		DDA3937_RS18670	0.27	-0.6
4,268,349	+		DDA3937_RS18670	0.29	+0.3
4,268,350	-		DDA3937_RS18670	0.29	-1.7
4,268,350	-		DDA3937_RS18670	0.29	-1.1
4,268,351	+		DDA3937_RS18670	0.29	+0.1
4,268,405	-		DDA3937_RS18670	0.36	-2.0
4,268,438	-		DDA3937_RS18670	0.41	-0.3
4,268,581	+		DDA3937_RS18670	0.59	-0.7
4,268,612	-		DDA3937_RS18670	0.63	-1.1
4,268,743	+		DDA3937_RS18670	0.80	-0.7
4,268,899	-				-1.6
4,268,949	+				-2.3
4,269,027	+		DDA3937_RS18675	0.17	-0.7
4,269,027	+		DDA3937_RS18675	0.17	+0.4
4,269,028	-		DDA3937_RS18675	0.17	-1.1
4,269,028	-		DDA3937_RS18675	0.17	-1.1