Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS18450

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,213,494	+		DDA3937_RS18440	0.39	-0.4
4,213,495	-		DDA3937_RS18440	0.39	-1.2
4,213,495	-		DDA3937_RS18440	0.39	-1.2
4,213,505	+		DDA3937_RS18440	0.40	-0.1
4,213,505	+		DDA3937_RS18440	0.40	+0.2
4,213,527	-		DDA3937_RS18440	0.44	+1.3
4,213,527	-		DDA3937_RS18440	0.44	+0.7
4,213,527	-		DDA3937_RS18440	0.44	-0.0
4,213,527	-		DDA3937_RS18440	0.44	-0.0
4,213,527	-		DDA3937_RS18440	0.44	+0.3
4,213,603	-		DDA3937_RS18440	0.55	+0.8
4,213,743	-		DDA3937_RS18440	0.77	-0.7
4,213,765	-		DDA3937_RS18440	0.80	+0.2
4,213,879	+				+0.1
4,213,879	+				-0.8
4,213,879	+				+0.9
4,213,879	+				+0.4
4,213,880	-				+2.0
4,213,880	-				+0.3
4,213,880	-				-1.5
4,213,880	-				+0.6
4,213,880	-				-0.2
4,213,880	-				-0.8
4,213,880	-				-0.5
4,213,880	-				+1.2
4,213,880	-				-0.0
4,213,880	-				-0.2
4,213,880	-				+0.4
4,213,880	-				+0.1
4,213,880	-				+0.4
4,213,881	+				-0.1
4,213,881	+				+1.1
4,213,882	-				+0.6
4,213,882	-				-0.3
4,213,882	-				-0.4
4,213,882	-				+0.3
4,213,882	-				+0.4
4,213,882	-				+0.3
4,213,882	-				+0.1
4,213,882	-				+0.6
4,213,887	+				-0.3
4,213,887	+				+0.6
4,213,888	-				+0.1
4,213,888	-				+0.2
4,213,888	-				+0.6
4,213,906	+				+1.1
4,213,908	+				+0.7
4,213,908	+				+0.3
4,213,908	+				+0.8
4,213,908	+				+0.2
4,213,908	+				+0.2
4,213,908	+				+0.4
4,213,908	+				-0.5
4,213,908	+				-0.4
4,213,908	+				-0.4
4,213,909	-				+1.6
4,213,909	-				-0.9
4,213,909	-				+0.5
4,213,921	+				-0.2
4,213,921	+				-0.1
4,213,922	-				-2.0
4,213,925	+				+0.8
4,213,925	+				+0.1
4,213,925	+				+0.5
4,213,925	+				+1.1
4,213,926	-				-1.5
4,213,926	-				-0.6
4,213,926	-				-0.8
4,213,926	-				-0.0
4,213,943	+				+0.8
4,213,943	+				+0.5
4,213,943	+				+0.8
4,213,943	+				-1.5
4,213,943	+				-0.8
4,213,943	+				-1.0
4,213,943	+				+0.8
4,213,943	+				+0.1
4,213,944	-				+0.2
4,213,944	-				+0.2
4,213,944	-				-0.4
4,213,944	-				-0.6
4,213,944	-				-0.4
4,213,944	-				-0.2
4,213,944	-				+0.1
4,213,944	-				-0.4
4,213,944	-				-0.5
4,213,947	+				+0.4
4,213,947	+				+0.0
4,213,947	+				+0.3
4,213,947	+				+0.6
4,213,947	+				+1.4
4,213,948	-				+1.0
4,213,948	-				-0.2
4,213,948	-				-0.4
4,213,965	-				+0.2
4,213,965	-				+0.1
4,213,965	-				+0.7
4,213,965	-				-0.8
4,213,999	+		DDA3937_RS18445	0.10	-0.5
4,214,027	+		DDA3937_RS18445	0.15	-1.1
4,214,027	+		DDA3937_RS18445	0.15	-0.5
4,214,080	+		DDA3937_RS18445	0.25	-0.5
4,214,257	+		DDA3937_RS18445	0.58	-0.2
4,214,257	+		DDA3937_RS18445	0.58	-1.3
4,214,258	-		DDA3937_RS18445	0.58	+0.5
4,214,258	-		DDA3937_RS18445	0.58	-0.3
4,214,303	-		DDA3937_RS18445	0.67	+0.8
4,214,403	+		DDA3937_RS18445	0.85	+0.2
4,214,404	-		DDA3937_RS18445	0.86	-1.5
4,214,404	-		DDA3937_RS18445	0.86	-0.8
4,214,404	-		DDA3937_RS18445	0.86	-1.7
4,214,404	-		DDA3937_RS18445	0.86	-0.3
4,214,404	-		DDA3937_RS18445	0.86	+0.3
4,214,404	-		DDA3937_RS18445	0.86	+0.1
4,214,404	-		DDA3937_RS18445	0.86	-0.9
4,214,406	+		DDA3937_RS18445	0.86	+0.2
4,214,406	+		DDA3937_RS18445	0.86	+0.6
4,214,407	-		DDA3937_RS18445	0.86	-0.6
4,214,442	-				-0.4
4,214,451	+				+0.2
4,214,495	+				+0.4
4,214,495	+				-0.4
4,214,496	-				-0.5
4,214,496	-				-0.8
4,214,665	-		DDA3937_RS18450	0.50	-0.2
4,214,665	-		DDA3937_RS18450	0.50	-1.0
4,214,665	-		DDA3937_RS18450	0.50	-0.5
4,214,665	-		DDA3937_RS18450	0.50	-0.2
4,214,667	+				-0.8
4,214,667	+		DDA3937_RS18450	0.51	-2.5
4,214,668	-		DDA3937_RS18450	0.51	-0.3
4,214,668	-		DDA3937_RS18450	0.51	-2.3
4,214,668	-		DDA3937_RS18450	0.51	-0.1
4,214,668	-		DDA3937_RS18450	0.51	+0.1
4,214,671	+		DDA3937_RS18450	0.52	-2.0
4,214,672	-		DDA3937_RS18450	0.52	+1.3
4,214,707	+		DDA3937_RS18450	0.62	-0.0
4,214,707	+		DDA3937_RS18450	0.62	-0.2
4,214,707	+		DDA3937_RS18450	0.62	-1.2
4,214,707	+		DDA3937_RS18450	0.62	-0.9
4,214,708	-		DDA3937_RS18450	0.63	-1.4
4,214,710	+		DDA3937_RS18450	0.63	-1.4
4,214,711	-		DDA3937_RS18450	0.63	-0.5
4,214,711	-		DDA3937_RS18450	0.63	+0.8
4,214,871	+				+0.5
4,214,872	-				+0.2
4,214,876	+				-0.2
4,214,877	-				+0.8
4,214,877	-				-0.4
4,214,877	-				+0.3
4,214,886	-				-0.4
4,214,944	+				-0.5
4,214,944	+				-0.2
4,214,945	-				-1.6
4,214,952	-				+1.3
4,214,983	+				+0.8
4,214,984	-				+0.0
4,214,984	-				-0.3
4,214,998	-				-0.5
4,215,027	+				-0.5
4,215,028	-				-0.5
4,215,056	+				-0.3
4,215,056	+				+1.1
4,215,056	+				-0.4
4,215,057	-				+0.4
4,215,057	-				-0.0
4,215,057	-				-1.5
4,215,057	-				-0.5
4,215,057	-				-1.8
4,215,060	-				+1.4
4,215,060	-				+0.1
4,215,134	+				+0.4
4,215,134	+				-0.5
4,215,135	-				+0.2
4,215,135	-				+0.3
4,215,142	+				+0.2
4,215,155	+				-0.8
4,215,155	+				-2.5
4,215,180	+				+0.3
4,215,180	+				-0.5
4,215,181	-				-0.5
4,215,181	-				+0.1
4,215,234	+				+0.3
4,215,234	+				+0.0
4,215,234	+				+0.2
4,215,234	+				+3.4
4,215,234	+				-0.5
4,215,234	+				-1.3
4,215,234	+				-0.4
4,215,260	+		DDA3937_RS18455	0.11	-0.2
4,215,260	+		DDA3937_RS18455	0.11	-0.2
4,215,260	+		DDA3937_RS18455	0.11	-0.7
4,215,261	-		DDA3937_RS18455	0.11	-0.8
4,215,261	-		DDA3937_RS18455	0.11	-1.0
4,215,261	-		DDA3937_RS18455	0.11	+0.2
4,215,261	-		DDA3937_RS18455	0.11	+0.5
4,215,261	-		DDA3937_RS18455	0.11	-0.4
4,215,303	-		DDA3937_RS18455	0.13	-0.0
4,215,308	+		DDA3937_RS18455	0.13	+0.8
4,215,308	+		DDA3937_RS18455	0.13	+0.4
4,215,308	+		DDA3937_RS18455	0.13	+0.0
4,215,308	+		DDA3937_RS18455	0.13	-0.1
4,215,309	-		DDA3937_RS18455	0.13	-0.2
4,215,309	-		DDA3937_RS18455	0.13	-0.7
4,215,309	-		DDA3937_RS18455	0.13	-0.1
4,215,318	-		DDA3937_RS18455	0.14	-0.4
4,215,318	-		DDA3937_RS18455	0.14	+0.7
4,215,318	-		DDA3937_RS18455	0.14	-0.8
4,215,363	+		DDA3937_RS18455	0.16	-0.8
4,215,363	+		DDA3937_RS18455	0.16	-1.2
4,215,372	+		DDA3937_RS18455	0.16	+0.2
4,215,372	+		DDA3937_RS18455	0.16	+0.6
4,215,372	+		DDA3937_RS18455	0.16	+0.8
4,215,372	+		DDA3937_RS18455	0.16	-0.1
4,215,372	+		DDA3937_RS18455	0.16	-0.8
4,215,372	+		DDA3937_RS18455	0.16	-0.3
4,215,372	+				-0.8
4,215,372	+		DDA3937_RS18455	0.16	+0.1
4,215,372	+		DDA3937_RS18455	0.16	-1.0
4,215,373	-		DDA3937_RS18455	0.16	+0.4
4,215,373	-		DDA3937_RS18455	0.16	+2.4
4,215,373	-		DDA3937_RS18455	0.16	-0.3
4,215,374	+		DDA3937_RS18455	0.17	-1.5
4,215,374	+		DDA3937_RS18455	0.17	-0.0
4,215,374	+		DDA3937_RS18455	0.17	-1.2
4,215,375	-		DDA3937_RS18455	0.17	-0.1
4,215,375	-		DDA3937_RS18455	0.17	-0.1
4,215,375	-		DDA3937_RS18455	0.17	-0.8
4,215,384	+		DDA3937_RS18455	0.17	-1.7
4,215,387	+		DDA3937_RS18455	0.17	-0.8
4,215,424	+		DDA3937_RS18455	0.19	+1.0
4,215,424	+		DDA3937_RS18455	0.19	-0.4
4,215,506	+		DDA3937_RS18455	0.23	+0.1
4,215,507	-		DDA3937_RS18455	0.23	-1.5
4,215,507	-		DDA3937_RS18455	0.23	+0.2
4,215,507	-		DDA3937_RS18455	0.23	-1.7
4,215,630	-		DDA3937_RS18455	0.30	+0.3
4,215,769	+		DDA3937_RS18455	0.37	+0.4
4,215,807	+		DDA3937_RS18455	0.39	-0.3
4,215,807	+		DDA3937_RS18455	0.39	-0.5
4,215,808	-		DDA3937_RS18455	0.39	-0.1
4,215,821	+		DDA3937_RS18455	0.40	-2.0
4,215,821	+		DDA3937_RS18455	0.40	-1.3
4,215,821	+		DDA3937_RS18455	0.40	+0.6
4,215,822	-		DDA3937_RS18455	0.40	-0.8
4,215,822	-		DDA3937_RS18455	0.40	+0.3
4,215,822	-		DDA3937_RS18455	0.40	-2.0
4,215,822	-		DDA3937_RS18455	0.40	+0.8