Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17550

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,990,737	+				-0.1
3,990,791	+				+0.9
3,990,791	+				+0.3
3,990,791	+				+0.8
3,990,791	+				-1.7
3,990,791	+				+0.1
3,990,791	+				+0.0
3,990,792	-				+0.3
3,990,792	-				+0.0
3,990,792	-				+0.4
3,990,792	-				-0.9
3,990,825	-				-0.2
3,990,884	+				-0.0
3,990,884	+				+0.5
3,990,885	-				-0.2
3,990,918	+				-0.4
3,990,918	+				+0.8
3,990,918	+				-0.6
3,990,918	+				+0.3
3,990,918	+				+0.8
3,990,918	+				-0.2
3,990,918	+				-0.2
3,990,918	+				-0.0
3,990,918	+				-0.0
3,990,919	-				+0.0
3,990,919	-				+0.3
3,990,919	-				+0.5
3,990,919	-				+0.6
3,990,919	-				+0.8
3,990,919	-				-0.8
3,990,919	-				-0.0
3,990,919	-				+0.1
3,990,944	+				-0.2
3,990,944	+				-1.6
3,990,945	-				+0.0
3,990,945	-				-0.5
3,990,953	+				+0.1
3,990,953	+				-1.6
3,990,974	+				+0.9
3,991,005	-				-0.4
3,991,005	-				+0.2
3,991,005	-				+0.8
3,991,013	+				-0.6
3,991,014	-				-1.4
3,991,072	+				-1.0
3,991,073	+				-1.6
3,991,073	+				-0.5
3,991,074	-				-1.0
3,991,074	-				+0.0
3,991,097	+				-0.7
3,991,098	-				-0.4
3,991,124	+				-0.3
3,991,125	-				+0.4
3,991,133	+				-0.2
3,991,193	+				+0.3
3,991,194	-				-1.4
3,991,194	-				-1.0
3,991,215	-				-0.2
3,991,215	-				-1.1
3,991,244	+				-0.0
3,991,244	+				-0.3
3,991,253	+				+0.4
3,991,254	-				+1.2
3,991,254	-				+0.3
3,991,254	-				-0.4
3,991,254	-				-0.4
3,991,314	-				-1.9
3,991,349	-				-2.2
3,991,349	-				-0.5
3,991,349	-				-0.1
3,991,349	-				-0.1
3,991,349	-				+0.2
3,991,352	+				+1.5
3,991,352	+				+0.8
3,991,353	-				-0.7
3,991,353	-				-1.6
3,991,353	-				-0.6
3,991,353	-				+0.0
3,991,364	+				+0.3
3,991,374	-				+1.5
3,991,424	+				+0.0
3,991,425	-				+0.1
3,991,425	-				-0.5
3,991,474	-				-0.6
3,991,484	+				-0.4
3,991,484	+				+0.3
3,991,493	+				-1.0
3,991,511	-				+0.8
3,991,514	-				-0.4
3,991,600	+				-0.4
3,991,702	+		DDA3937_RS17550	0.12	+0.2
3,991,702	+		DDA3937_RS17550	0.12	+1.3
3,991,773	+		DDA3937_RS17550	0.25	-0.8
3,991,774	-		DDA3937_RS17550	0.25	-2.7
3,991,801	+		DDA3937_RS17550	0.30	+0.0
3,991,802	-		DDA3937_RS17550	0.30	+0.4
3,991,802	-		DDA3937_RS17550	0.30	+0.8
3,991,803	+		DDA3937_RS17550	0.30	-0.7
3,991,804	-		DDA3937_RS17550	0.30	-0.8
3,991,829	+		DDA3937_RS17550	0.35	+1.3
3,991,829	+		DDA3937_RS17550	0.35	+0.0
3,991,829	+		DDA3937_RS17550	0.35	-0.5
3,991,829	+		DDA3937_RS17550	0.35	-0.9
3,991,830	-		DDA3937_RS17550	0.35	-0.1
3,991,830	-		DDA3937_RS17550	0.35	-0.3
3,991,830	-		DDA3937_RS17550	0.35	+0.3
3,991,901	+		DDA3937_RS17550	0.48	-0.1
3,991,902	-		DDA3937_RS17550	0.48	-1.2
3,991,902	-		DDA3937_RS17550	0.48	-0.6
3,991,954	+		DDA3937_RS17550	0.57	+0.8
3,991,957	-		DDA3937_RS17550	0.58	+0.6
3,991,957	-		DDA3937_RS17550	0.58	-0.2
3,992,179	+				-1.4
3,992,180	-				-0.4
3,992,180	-				-0.7
3,992,181	+				-0.7
3,992,181	+				+0.2
3,992,181	+				+1.2
3,992,182	-				-0.6
3,992,182	-				-0.2
3,992,182	-				-1.3
3,992,182	-				-0.1
3,992,182	-				-0.1
3,992,182	-				-0.5
3,992,182	-				+0.5
3,992,182	-				-1.2
3,992,182	-				-1.0
3,992,192	-				-1.0
3,992,200	-				-0.8
3,992,250	+				+0.9
3,992,250	+				-0.9
3,992,251	-				+0.3
3,992,251	-				-0.2
3,992,251	-				-0.2
3,992,251	-				-0.9
3,992,251	-				-0.6
3,992,251	-				-1.2
3,992,251	-				+1.4
3,992,251	-				+0.8
3,992,251	-				-0.8
3,992,251	-				+0.2
3,992,251	-				+1.2
3,992,251	-				-0.5
3,992,251	-				-0.8
3,992,251	-				+0.4
3,992,297	-				+3.1
3,992,297	-				+1.0
3,992,297	-				+0.2
3,992,311	-		DDA3937_RS17555	0.11	-1.8
3,992,311	-		DDA3937_RS17555	0.11	-1.2
3,992,341	-		DDA3937_RS17555	0.14	-1.3
3,992,370	+		DDA3937_RS17555	0.17	+0.3
3,992,665	+		DDA3937_RS17555	0.46	+1.0
3,992,710	+		DDA3937_RS17555	0.51	+0.8
3,992,711	-		DDA3937_RS17555	0.51	+0.2
3,992,759	-		DDA3937_RS17555	0.56	-0.4
3,992,835	+		DDA3937_RS17555	0.63	-0.3
3,992,836	-		DDA3937_RS17555	0.63	+0.1
3,992,868	+		DDA3937_RS17555	0.66	-0.0
3,992,868	+		DDA3937_RS17555	0.66	+0.1
3,992,869	-		DDA3937_RS17555	0.67	+0.1
3,992,942	-		DDA3937_RS17555	0.74	+0.2
3,992,966	+		DDA3937_RS17555	0.76	-0.2
3,992,967	-		DDA3937_RS17555	0.76	-0.9
3,992,967	-		DDA3937_RS17555	0.76	-1.1
3,992,981	+		DDA3937_RS17555	0.78	+1.1
3,992,981	+		DDA3937_RS17555	0.78	-0.3
3,992,982	-		DDA3937_RS17555	0.78	-0.1
3,992,982	-		DDA3937_RS17555	0.78	+0.4
3,992,982	-		DDA3937_RS17555	0.78	+0.5
3,993,013	+		DDA3937_RS17555	0.81	-0.2
3,993,014	-		DDA3937_RS17555	0.81	-0.7