Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17045

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,879,813	-				+0.1
3,879,824	+				+0.7
3,879,824	+				-0.3
3,879,825	-				-0.3
3,879,825	-				+0.6
3,879,825	-				-0.1
3,879,825	-				-0.9
3,879,878	+				+0.7
3,879,878	+				-0.1
3,879,878	+				+0.7
3,879,879	-				+0.7
3,879,879	-				-1.4
3,879,879	-				-0.6
3,879,879	-				+0.5
3,879,879	-				-1.6
3,879,879	-				-0.4
3,879,905	+				+0.5
3,879,906	-				-1.3
3,879,915	+				+0.8
3,879,916	-				-0.2
3,879,916	-				-0.0
3,879,916	-				+0.0
3,879,923	-				-0.0
3,880,055	-		DDA3937_RS17040	0.18	-1.0
3,880,129	-		DDA3937_RS17040	0.28	-0.4
3,880,272	+		DDA3937_RS17040	0.46	-0.1
3,880,273	-		DDA3937_RS17040	0.47	-0.8
3,880,273	-		DDA3937_RS17040	0.47	-3.3
3,880,291	-		DDA3937_RS17040	0.49	+0.2
3,880,407	+		DDA3937_RS17040	0.64	+1.2
3,880,407	+		DDA3937_RS17040	0.64	+1.3
3,880,408	-		DDA3937_RS17040	0.64	+0.1
3,880,450	+		DDA3937_RS17040	0.70	+0.1
3,880,511	-		DDA3937_RS17040	0.77	-0.6
3,880,511	-		DDA3937_RS17040	0.77	-0.9
3,880,511	-		DDA3937_RS17040	0.77	-1.0
3,880,580	+		DDA3937_RS17040	0.86	+0.0
3,880,580	+		DDA3937_RS17040	0.86	+1.8
3,880,581	-		DDA3937_RS17040	0.87	-1.3
3,880,600	+		DDA3937_RS17040	0.89	-1.6
3,880,644	-				-1.6
3,880,695	+				-0.9
3,880,696	-				+1.1
3,880,696	-				-0.7
3,880,702	+				+0.4
3,880,702	+				+1.1
3,880,703	-				+1.0
3,880,734	+				-0.0
3,880,735	-				-0.5
3,880,735	-				+0.9
3,880,739	-				+1.1
3,880,739	-				+0.9
3,880,778	+				+0.2
3,880,781	+				+1.0
3,880,807	+				-0.0
3,880,808	-				-0.1
3,880,854	-				+0.5
3,880,854	-				-0.7
3,880,856	-				+0.1
3,880,947	+		DDA3937_RS17045	0.14	+0.6
3,880,973	+		DDA3937_RS17045	0.16	-0.6
3,880,974	-		DDA3937_RS17045	0.16	-0.3
3,881,060	+		DDA3937_RS17045	0.23	+1.5
3,881,061	-		DDA3937_RS17045	0.23	-0.7
3,881,228	+		DDA3937_RS17045	0.35	+0.5
3,881,228	+		DDA3937_RS17045	0.35	-0.1
3,881,228	+		DDA3937_RS17045	0.35	+1.0
3,881,229	-		DDA3937_RS17045	0.35	-1.2
3,881,229	-		DDA3937_RS17045	0.35	-0.0
3,881,229	-		DDA3937_RS17045	0.35	-0.2
3,881,360	+		DDA3937_RS17045	0.45	-0.5
3,881,360	+		DDA3937_RS17045	0.45	+0.7
3,881,360	+		DDA3937_RS17045	0.45	+3.0
3,881,361	-				+0.7
3,881,361	-		DDA3937_RS17045	0.45	-1.0
3,881,500	+		DDA3937_RS17045	0.56	+0.9
3,881,500	+		DDA3937_RS17045	0.56	+1.8
3,881,638	+		DDA3937_RS17045	0.66	+0.7
3,881,638	+		DDA3937_RS17045	0.66	-0.1
3,881,639	-		DDA3937_RS17045	0.66	+0.7
3,881,639	-		DDA3937_RS17045	0.66	-0.4
3,881,639	-		DDA3937_RS17045	0.66	-0.0
3,881,706	+		DDA3937_RS17045	0.71	-0.0
3,881,858	-		DDA3937_RS17045	0.82	+1.0
3,881,873	+		DDA3937_RS17045	0.83	-0.5
3,881,873	+		DDA3937_RS17045	0.83	+0.2
3,881,874	-		DDA3937_RS17045	0.83	-2.3
3,881,874	-		DDA3937_RS17045	0.83	+0.4
3,881,874	-		DDA3937_RS17045	0.83	+0.3
3,881,978	+				+0.8
3,881,993	-				-0.6
3,882,059	+				+0.6
3,882,066	-				-0.9
3,882,066	-				-2.3
3,882,066	-				-0.0
3,882,098	+				-0.3
3,882,113	-				+0.1
3,882,128	+				+0.4
3,882,133	-				-0.3
3,882,187	+				-0.3
3,882,187	+				+0.2
3,882,187	+				-0.4
3,882,188	-				+0.5
3,882,267	-		DDA3937_RS17050	0.11	-1.2
3,882,412	-		DDA3937_RS17050	0.22	-0.6
3,882,950	-		DDA3937_RS17050	0.62	-0.7
3,882,982	+		DDA3937_RS17050	0.64	-0.9
3,882,983	-		DDA3937_RS17050	0.64	-0.3
3,883,015	+		DDA3937_RS17050	0.66	-0.3
3,883,015	+		DDA3937_RS17050	0.66	-1.3
3,883,015	+		DDA3937_RS17050	0.66	-0.3
3,883,015	+		DDA3937_RS17050	0.66	+0.4
3,883,015	+		DDA3937_RS17050	0.66	+0.6
3,883,015	+		DDA3937_RS17050	0.66	-0.4
3,883,015	+		DDA3937_RS17050	0.66	-0.3
3,883,015	+		DDA3937_RS17050	0.66	+1.6
3,883,016	-		DDA3937_RS17050	0.66	-1.3
3,883,016	-		DDA3937_RS17050	0.66	+0.2
3,883,016	-		DDA3937_RS17050	0.66	-0.7
3,883,016	-		DDA3937_RS17050	0.66	+0.6
3,883,016	-		DDA3937_RS17050	0.66	+0.1
3,883,016	-		DDA3937_RS17050	0.66	-0.2