Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16430

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,746,836	+		DDA3937_RS16425	0.19	-0.1
3,746,836	+		DDA3937_RS16425	0.19	+1.0
3,746,836	+				+1.2
3,746,837	-		DDA3937_RS16425	0.19	+0.1
3,746,837	-		DDA3937_RS16425	0.19	-0.2
3,746,837	-		DDA3937_RS16425	0.19	+0.6
3,746,837	-		DDA3937_RS16425	0.19	+0.1
3,746,840	+		DDA3937_RS16425	0.19	+0.9
3,746,841	-		DDA3937_RS16425	0.19	-0.3
3,746,841	-		DDA3937_RS16425	0.19	-0.9
3,746,841	-		DDA3937_RS16425	0.19	+0.1
3,746,841	-		DDA3937_RS16425	0.19	+0.1
3,746,973	-		DDA3937_RS16425	0.32	+0.4
3,747,074	+		DDA3937_RS16425	0.42	-0.8
3,747,075	-		DDA3937_RS16425	0.42	+0.4
3,747,075	-		DDA3937_RS16425	0.42	-0.4
3,747,193	+		DDA3937_RS16425	0.53	-0.9
3,747,194	-		DDA3937_RS16425	0.53	-0.8
3,747,194	-		DDA3937_RS16425	0.53	-0.2
3,747,194	-				+0.7
3,747,196	+		DDA3937_RS16425	0.54	-0.6
3,747,282	-		DDA3937_RS16425	0.62	-1.0
3,747,282	-		DDA3937_RS16425	0.62	+0.3
3,747,282	-		DDA3937_RS16425	0.62	-1.0
3,747,304	+		DDA3937_RS16425	0.64	+0.2
3,747,305	-		DDA3937_RS16425	0.64	-0.3
3,747,363	+		DDA3937_RS16425	0.70	-0.9
3,747,458	-		DDA3937_RS16425	0.79	-0.9
3,747,542	+		DDA3937_RS16425	0.87	+0.9
3,747,543	-		DDA3937_RS16425	0.87	+0.7
3,747,553	+		DDA3937_RS16425	0.88	+0.0
3,747,553	+		DDA3937_RS16425	0.88	-0.1
3,747,553	+		DDA3937_RS16425	0.88	-0.2
3,747,553	+		DDA3937_RS16425	0.88	+1.4
3,747,553	+		DDA3937_RS16425	0.88	+1.1
3,747,554	-		DDA3937_RS16425	0.88	+0.7
3,747,554	-		DDA3937_RS16425	0.88	+0.2
3,747,607	+				-0.2
3,747,608	-				-0.7
3,747,684	-				-0.3
3,747,684	-				+0.3
3,747,684	-				-0.2
3,747,695	+				-0.8
3,747,696	-				+0.2
3,747,726	+				-0.9
3,747,727	-				-0.2
3,747,741	+				-0.9
3,747,749	+				+0.2
3,747,749	+				+1.2
3,747,806	+				+0.9
3,747,806	+				-0.5
3,747,806	+				-0.1
3,747,807	-		DDA3937_RS16430	0.10	-0.5
3,747,815	-		DDA3937_RS16430	0.14	-2.5
3,747,835	+		DDA3937_RS16430	0.23	-0.6
3,747,835	+		DDA3937_RS16430	0.23	-0.2
3,747,835	+		DDA3937_RS16430	0.23	-1.3
3,747,835	+		DDA3937_RS16430	0.23	-2.2
3,747,836	-		DDA3937_RS16430	0.23	-1.9
3,747,873	-		DDA3937_RS16430	0.40	-0.4
3,747,948	+		DDA3937_RS16430	0.74	+2.7
3,747,967	+		DDA3937_RS16430	0.82	-0.6
3,747,991	+				+0.1
3,748,025	+				+0.1
3,748,025	+				-1.0
3,748,026	-				-0.7
3,748,056	+				+0.2
3,748,098	+				+0.7
3,748,099	-				+0.7
3,748,122	+				-1.4
3,748,122	+				+0.1
3,748,122	+				+0.5
3,748,122	+				-0.1
3,748,122	+				-0.4
3,748,123	-				-1.2
3,748,123	-				+0.1
3,748,123	-				+0.1
3,748,123	-				+0.7
3,748,123	-				-0.6
3,748,123	-				-1.3
3,748,124	+				-0.2
3,748,124	+				+1.0
3,748,124	+				-1.3
3,748,124	+				-0.6
3,748,125	-				-0.1
3,748,172	-		DDA3937_RS16435	0.10	-0.3
3,748,197	+		DDA3937_RS16435	0.12	-1.9
3,748,198	-		DDA3937_RS16435	0.12	+1.7
3,748,343	+		DDA3937_RS16435	0.22	+0.8
3,748,476	+		DDA3937_RS16435	0.32	+0.4
3,748,477	-		DDA3937_RS16435	0.32	-0.9
3,748,616	+		DDA3937_RS16435	0.41	-1.2
3,748,616	+		DDA3937_RS16435	0.41	-0.7
3,748,617	-		DDA3937_RS16435	0.41	-0.8
3,748,617	-		DDA3937_RS16435	0.41	-1.2
3,748,654	+		DDA3937_RS16435	0.44	+0.2
3,748,655	-		DDA3937_RS16435	0.44	+1.1
3,748,664	-		DDA3937_RS16435	0.45	-0.5
3,748,678	+		DDA3937_RS16435	0.46	+0.1
3,748,721	+		DDA3937_RS16435	0.49	-0.3
3,748,721	+		DDA3937_RS16435	0.49	-0.1
3,748,721	+		DDA3937_RS16435	0.49	-0.2
3,748,722	-		DDA3937_RS16435	0.49	-2.2
3,748,722	-		DDA3937_RS16435	0.49	-0.7
3,748,722	-		DDA3937_RS16435	0.49	+0.8