Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15205

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,484,683	-				-0.5
3,484,713	+				+1.3
3,484,714	-				-0.2
3,484,714	-				-0.2
3,484,814	-		DDA3937_RS15195	0.41	-0.2
3,484,814	-		DDA3937_RS15195	0.41	-1.0
3,484,814	-		DDA3937_RS15195	0.41	-0.8
3,484,814	-		DDA3937_RS15195	0.41	+0.5
3,485,002	-				-0.5
3,485,003	+				-0.7
3,485,003	+				+0.7
3,485,003	+				+0.8
3,485,003	+				+0.5
3,485,003	+				-1.4
3,485,004	-				+0.2
3,485,004	-				-0.8
3,485,004	-				+0.1
3,485,056	+				-0.0
3,485,056	+				+0.9
3,485,056	+				-0.2
3,485,056	+				-0.8
3,485,056	+				-2.9
3,485,057	-				+0.9
3,485,057	-				-0.2
3,485,057	-				+0.3
3,485,057	-				-0.7
3,485,057	-				-0.2
3,485,057	-				-0.4
3,485,059	+				-0.1
3,485,059	+				+0.2
3,485,060	-				-0.4
3,485,060	-				+0.0
3,485,060	-				+0.2
3,485,060	-				-0.2
3,485,063	-				-0.0
3,485,067	+				-0.9
3,485,068	-				-0.0
3,485,068	-				-1.4
3,485,148	+				+0.1
3,485,148	+				+0.0
3,485,148	+				-0.1
3,485,148	+				-0.1
3,485,149	-				-0.5
3,485,149	-				+1.6
3,485,149	-				-0.0
3,485,149	-				+1.3
3,485,149	-				-0.4
3,485,149	-				-0.4
3,485,157	+				+0.5
3,485,157	+				+0.5
3,485,157	+				-0.4
3,485,158	-				+0.6
3,485,158	-				-0.0
3,485,158	-				-2.4
3,485,158	-				-0.7
3,485,158	-				-0.4
3,485,158	-				-0.7
3,485,158	-				-0.1
3,485,160	+				+0.3
3,485,161	-				-1.5
3,485,161	-				+0.4
3,485,161	-				-0.4
3,485,179	+				+0.2
3,485,179	+				-0.2
3,485,179	+				-1.4
3,485,179	+				-0.1
3,485,179	+				-0.2
3,485,179	+				+0.3
3,485,180	-				+1.4
3,485,180	-				-0.2
3,485,180	-				-0.0
3,485,186	-				-0.8
3,485,191	+				-0.7
3,485,191	+				+0.6
3,485,192	-				+0.1
3,485,221	+		DDA3937_RS15200	0.13	+1.1
3,485,221	+		DDA3937_RS15200	0.13	+0.3
3,485,221	+		DDA3937_RS15200	0.13	-0.3
3,485,222	-		DDA3937_RS15200	0.14	-1.0
3,485,222	-				-0.2
3,485,226	+		DDA3937_RS15200	0.15	-0.5
3,485,267	+		DDA3937_RS15200	0.28	-1.2
3,485,267	+		DDA3937_RS15200	0.28	-0.7
3,485,268	-		DDA3937_RS15200	0.28	+0.9
3,485,299	-		DDA3937_RS15200	0.39	+0.4
3,485,334	-		DDA3937_RS15200	0.50	-0.4
3,485,369	-		DDA3937_RS15200	0.61	-0.1
3,485,378	+		DDA3937_RS15200	0.64	+0.2
3,485,378	+		DDA3937_RS15200	0.64	-0.8
3,485,378	+		DDA3937_RS15200	0.64	+0.1
3,485,379	-				-0.4
3,485,379	-		DDA3937_RS15200	0.64	+0.3
3,485,379	-		DDA3937_RS15200	0.64	-0.4
3,485,379	-		DDA3937_RS15200	0.64	+0.3
3,485,486	+				-1.0
3,485,486	+				-1.2
3,485,486	+				-0.7
3,485,487	-				+0.4
3,485,487	-				+2.9
3,485,487	-				-0.4
3,485,489	+				-0.3
3,485,489	+				+0.2
3,485,489	+				-2.0
3,485,489	+				-0.4
3,485,489	+				+0.2
3,485,489	+				-1.2
3,485,489	+				+0.2
3,485,489	+				+0.3
3,485,489	+				+1.6
3,485,489	+				+1.2
3,485,490	-				-0.7
3,485,490	-				-0.2
3,485,490	-				+0.6
3,485,490	-				-0.2
3,485,490	-				+1.1
3,485,490	-				-0.1
3,485,490	-				+0.9
3,485,607	+				-0.9
3,485,733	+		DDA3937_RS15205	0.34	-0.5
3,485,734	-		DDA3937_RS15205	0.34	-1.4
3,485,789	+		DDA3937_RS15205	0.48	-0.4
3,485,790	-		DDA3937_RS15205	0.48	+0.1
3,485,808	-		DDA3937_RS15205	0.52	+0.3
3,485,824	+		DDA3937_RS15205	0.56	-1.4
3,485,868	-		DDA3937_RS15205	0.67	-0.9
3,485,902	+		DDA3937_RS15205	0.75	-0.2
3,485,902	+		DDA3937_RS15205	0.75	-1.7
3,485,918	-		DDA3937_RS15205	0.79	-0.3
3,485,987	+				-1.7
3,485,988	-				+0.6
3,485,990	+				-1.6
3,485,990	+				-1.6
3,486,030	+				-0.4
3,486,030	+				-0.8
3,486,031	-				-0.2
3,486,031	-				+0.5
3,486,031	-				-0.0
3,486,031	-				+0.8
3,486,032	+				+1.5
3,486,032	+				+0.7
3,486,033	-				-0.4
3,486,033	-				+1.4
3,486,033	-				-0.7
3,486,033	-				+0.2
3,486,109	+				-0.0
3,486,156	+				-1.7
3,486,156	+				-0.7
3,486,156	+				-0.1
3,486,156	+				+0.3
3,486,157	-				-1.6
3,486,157	-				+0.4
3,486,157	-				+0.2
3,486,157	-				+1.1
3,486,157	-				-0.7
3,486,157	-				-0.6
3,486,157	-				+0.2
3,486,185	-				-0.7
3,486,214	+				+0.6
3,486,215	-				-0.6
3,486,215	-				-1.7
3,486,289	+				+1.2
3,486,289	+				-0.8
3,486,290	-				-0.6
3,486,290	-				-0.0
3,486,290	-				+0.1
3,486,290	-				-1.2
3,486,331	+				+0.1
3,486,331	+				+0.1
3,486,332	-				+0.3
3,486,525	-		DDA3937_RS15210	0.36	-0.4
3,486,525	-		DDA3937_RS15210	0.36	+0.6
3,486,651	+		DDA3937_RS15210	0.56	+0.6
3,486,652	-		DDA3937_RS15210	0.56	+0.8
3,486,746	+		DDA3937_RS15210	0.70	-0.9
3,486,778	+		DDA3937_RS15210	0.75	+0.3
3,486,779	-		DDA3937_RS15210	0.75	-0.3
3,486,808	+		DDA3937_RS15210	0.80	-0.3
3,486,809	-		DDA3937_RS15210	0.80	+0.1
3,486,809	-		DDA3937_RS15210	0.80	+0.1
3,486,818	-		DDA3937_RS15210	0.81	-0.2
3,486,863	+		DDA3937_RS15210	0.88	+0.7