Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15030

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,449,624	+		DDA3937_RS15025	0.71	-1.4
3,449,730	-		DDA3937_RS15025	0.78	-0.0
3,449,730	-		DDA3937_RS15025	0.78	+0.2
3,449,730	-		DDA3937_RS15025	0.78	-0.4
3,449,809	+		DDA3937_RS15025	0.84	-0.1
3,449,810	-		DDA3937_RS15025	0.84	-0.3
3,449,814	+		DDA3937_RS15025	0.84	-0.3
3,449,814	+		DDA3937_RS15025	0.84	-0.3
3,449,814	+		DDA3937_RS15025	0.84	-0.5
3,449,815	-		DDA3937_RS15025	0.84	+0.6
3,449,815	-		DDA3937_RS15025	0.84	+0.6
3,449,815	-		DDA3937_RS15025	0.84	+0.3
3,449,815	-		DDA3937_RS15025	0.84	+1.2
3,449,946	+				+0.8
3,449,946	+				+0.6
3,449,946	+				-0.1
3,449,946	+				-0.0
3,449,946	+				-1.0
3,449,947	-				+0.4
3,449,947	-				-0.3
3,449,947	-				+0.2
3,449,947	-				-1.8
3,449,947	-				-1.0
3,450,054	+				+0.0
3,450,055	-				-0.7
3,450,055	-				-0.7
3,450,068	+				-1.4
3,450,068	+				-0.1
3,450,068	+				+0.1
3,450,068	+				-1.0
3,450,068	+				+0.3
3,450,068	+				-0.6
3,450,069	-				-0.2
3,450,069	-				-0.4
3,450,069	-				+0.4
3,450,069	-				+0.3
3,450,069	-				-0.0
3,450,069	-				+1.4
3,450,069	-				-1.0
3,450,069	-				+1.0
3,450,416	+		DDA3937_RS15030	0.45	-1.4
3,450,416	+		DDA3937_RS15030	0.45	-1.8
3,450,416	+		DDA3937_RS15030	0.45	-1.9
3,450,417	-		DDA3937_RS15030	0.45	-1.0
3,450,417	-		DDA3937_RS15030	0.45	-0.2
3,450,483	+		DDA3937_RS15030	0.53	-1.1
3,450,511	+		DDA3937_RS15030	0.57	-1.1
3,450,512	-		DDA3937_RS15030	0.57	-1.0
3,450,522	+		DDA3937_RS15030	0.58	-0.8
3,450,523	-		DDA3937_RS15030	0.58	+0.6
3,450,523	-		DDA3937_RS15030	0.58	-0.5
3,450,690	+		DDA3937_RS15030	0.80	+1.4
3,450,777	+				-0.4
3,450,804	+				-1.8
3,450,804	+				-1.3
3,450,804	+				+1.3
3,450,804	+				-1.8
3,450,804	+				-1.0
3,450,805	-				+0.0
3,450,805	-				+0.8
3,450,805	-				+0.7
3,450,829	+				-0.4
3,450,844	-				+1.0
3,450,893	+				-0.0
3,450,917	+		DDA3937_RS15035	0.10	+0.1
3,450,918	-		DDA3937_RS15035	0.11	-0.9
3,450,928	+		DDA3937_RS15035	0.12	-0.5
3,450,948	+		DDA3937_RS15035	0.15	-0.5
3,450,948	+		DDA3937_RS15035	0.15	+0.6
3,450,948	+		DDA3937_RS15035	0.15	-0.7
3,450,948	+		DDA3937_RS15035	0.15	-0.4
3,450,948	+		DDA3937_RS15035	0.15	-0.1
3,450,949	-		DDA3937_RS15035	0.15	-0.8
3,450,987	+		DDA3937_RS15035	0.20	-0.2
3,451,031	+		DDA3937_RS15035	0.26	-0.1
3,451,228	+		DDA3937_RS15035	0.54	+0.3
3,451,229	-		DDA3937_RS15035	0.54	-0.4
3,451,229	-		DDA3937_RS15035	0.54	+1.3
3,451,335	+		DDA3937_RS15035	0.69	+1.4
3,451,335	+		DDA3937_RS15035	0.69	-1.0
3,451,335	+		DDA3937_RS15035	0.69	+0.4
3,451,338	+		DDA3937_RS15035	0.69	-0.7
3,451,338	+		DDA3937_RS15035	0.69	-0.0
3,451,338	+		DDA3937_RS15035	0.69	+0.4
3,451,338	+				-0.8
3,451,339	-		DDA3937_RS15035	0.69	-0.7
3,451,339	-		DDA3937_RS15035	0.69	-0.9
3,451,349	+		DDA3937_RS15035	0.71	-0.4
3,451,387	+		DDA3937_RS15035	0.76	+0.6
3,451,387	+		DDA3937_RS15035	0.76	-0.4
3,451,387	+		DDA3937_RS15035	0.76	-0.2
3,451,387	+				+2.1
3,451,387	+		DDA3937_RS15035	0.76	-0.1
3,451,388	-		DDA3937_RS15035	0.76	+0.4
3,451,388	-		DDA3937_RS15035	0.76	+0.1
3,451,388	-		DDA3937_RS15035	0.76	+1.0
3,451,389	+		DDA3937_RS15035	0.76	-0.2
3,451,389	+		DDA3937_RS15035	0.76	-0.6
3,451,389	+		DDA3937_RS15035	0.76	-0.0
3,451,389	+		DDA3937_RS15035	0.76	-1.4
3,451,389	+		DDA3937_RS15035	0.76	+0.7
3,451,389	+		DDA3937_RS15035	0.76	+0.2
3,451,389	+		DDA3937_RS15035	0.76	-0.4
3,451,389	+		DDA3937_RS15035	0.76	+1.1
3,451,389	+		DDA3937_RS15035	0.76	+0.6
3,451,389	+		DDA3937_RS15035	0.76	+0.4
3,451,389	+		DDA3937_RS15035	0.76	-0.2
3,451,389	+		DDA3937_RS15035	0.76	-0.3
3,451,390	-		DDA3937_RS15035	0.76	+0.7
3,451,390	-		DDA3937_RS15035	0.76	+0.6
3,451,390	-		DDA3937_RS15035	0.76	-0.4
3,451,390	-		DDA3937_RS15035	0.76	+0.9
3,451,390	-		DDA3937_RS15035	0.76	-0.8
3,451,390	-		DDA3937_RS15035	0.76	-1.3
3,451,390	-		DDA3937_RS15035	0.76	-0.6
3,451,586	+				-0.2
3,451,587	-				+0.6
3,451,653	-		DDA3937_RS15040	0.14	+0.8
3,451,653	-		DDA3937_RS15040	0.14	+3.7
3,451,674	-		DDA3937_RS15040	0.16	-0.4
3,451,686	-		DDA3937_RS15040	0.18	-1.0
3,451,686	-		DDA3937_RS15040	0.18	-1.0