Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14630

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,349,118	-		DDA3937_RS14625	0.42	+0.2
3,349,138	+				-1.1
3,349,139	-		DDA3937_RS14625	0.45	+0.5
3,349,238	+		DDA3937_RS14625	0.58	-1.0
3,349,238	+		DDA3937_RS14625	0.58	-1.2
3,349,238	+		DDA3937_RS14625	0.58	+0.6
3,349,238	+		DDA3937_RS14625	0.58	+2.1
3,349,239	-		DDA3937_RS14625	0.58	+0.1
3,349,239	-		DDA3937_RS14625	0.58	+0.1
3,349,241	+		DDA3937_RS14625	0.58	+0.2
3,349,242	-		DDA3937_RS14625	0.58	-0.2
3,349,297	+		DDA3937_RS14625	0.65	+0.2
3,349,298	-		DDA3937_RS14625	0.66	+0.9
3,349,372	+		DDA3937_RS14625	0.75	+0.5
3,349,372	+		DDA3937_RS14625	0.75	+0.0
3,349,373	-		DDA3937_RS14625	0.75	-0.1
3,349,373	-		DDA3937_RS14625	0.75	-1.8
3,349,373	-		DDA3937_RS14625	0.75	+0.5
3,349,373	-		DDA3937_RS14625	0.75	+0.0
3,349,373	-		DDA3937_RS14625	0.75	-0.4
3,349,373	-		DDA3937_RS14625	0.75	+0.3
3,349,373	-		DDA3937_RS14625	0.75	-0.6
3,349,408	+		DDA3937_RS14625	0.80	+0.2
3,349,408	+		DDA3937_RS14625	0.80	+0.3
3,349,408	+		DDA3937_RS14625	0.80	+0.3
3,349,408	+		DDA3937_RS14625	0.80	+2.1
3,349,409	-		DDA3937_RS14625	0.80	+1.5
3,349,426	+		DDA3937_RS14625	0.82	+0.4
3,349,427	-		DDA3937_RS14625	0.83	+0.1
3,349,442	+		DDA3937_RS14625	0.85	+0.0
3,349,442	+		DDA3937_RS14625	0.85	+0.8
3,349,442	+		DDA3937_RS14625	0.85	+0.9
3,349,497	-				-1.1
3,349,559	+				+0.3
3,349,564	+				+0.3
3,349,564	+				+0.5
3,349,564	+				+0.6
3,349,565	-				+0.1
3,349,565	-				+0.5
3,349,565	-				-0.2
3,349,565	-				+1.5
3,349,565	-				-0.2
3,349,635	+				+0.6
3,349,635	+				+1.5
3,349,636	-				+0.5
3,349,636	-				+0.5
3,349,643	+				-0.2
3,349,643	+				+0.7
3,349,644	-				+0.4
3,349,644	-				-1.0
3,349,644	-				-1.1
3,349,644	-				-0.8
3,349,709	-				-0.5
3,349,861	-				-0.5
3,350,042	-				-1.1
3,350,042	-				-0.9
3,350,070	+		DDA3937_RS14630	0.15	-0.5
3,350,071	-		DDA3937_RS14630	0.16	-1.1
3,350,071	-		DDA3937_RS14630	0.16	-0.5
3,350,080	+		DDA3937_RS14630	0.28	-1.5
3,350,081	-		DDA3937_RS14630	0.29	-0.1
3,350,081	-		DDA3937_RS14630	0.29	-0.9
3,350,081	-		DDA3937_RS14630	0.29	-0.1
3,350,081	-		DDA3937_RS14630	0.29	-1.0
3,350,101	+		DDA3937_RS14630	0.56	-2.8
3,350,102	-		DDA3937_RS14630	0.57	+1.5
3,350,102	-		DDA3937_RS14630	0.57	-0.0
3,350,154	-				+0.8
3,350,166	+				+1.2
3,350,166	+				+0.2
3,350,166	+				+0.2
3,350,166	+				+0.7
3,350,167	-				+0.2
3,350,202	-				+0.0
3,350,202	-				-0.8
3,350,202	-				-0.5
3,350,214	-				-0.2
3,350,241	-				-0.5
3,350,280	+				+1.1
3,350,281	-				-2.5
3,350,292	+				+0.9
3,350,313	+				-0.2
3,350,313	+				-0.3
3,350,313	+				-0.5
3,350,314	-				+1.2
3,350,314	-				-0.8
3,350,315	+				+0.5
3,350,315	+				-0.0
3,350,315	+				+0.4
3,350,315	+				-0.4
3,350,315	+				-0.5
3,350,315	+				+1.2
3,350,316	-				-0.8
3,350,316	-				+0.5
3,350,316	-				-0.2
3,350,316	-				-0.1
3,350,316	-				+1.5
3,350,316	-				-0.5
3,350,316	-				-0.8
3,350,317	+				-0.3
3,350,317	+				+1.5
3,350,317	+				-0.7
3,350,317	+				-0.7
3,350,317	+				+1.1
3,350,317	+				+1.1
3,350,317	+				-0.1
3,350,317	+				+0.7
3,350,317	+				-0.2
3,350,317	+				-0.6
3,350,317	+				+0.7
3,350,317	+				-0.1
3,350,317	+				+1.0
3,350,318	-				-1.4
3,350,318	-				-0.1
3,350,318	-				+0.2
3,350,318	-				-1.0
3,350,318	-				-0.3
3,350,318	-				-0.1
3,350,318	-				+0.0
3,350,324	-				+0.1
3,350,325	+				-1.4
3,350,325	+				-0.5
3,350,325	+				-0.3
3,350,325	+				-0.9
3,350,325	+				+0.9
3,350,326	-				+0.1
3,350,326	-				+0.6
3,350,326	-				-0.1
3,350,351	+				+0.2
3,350,351	+				-2.1
3,350,351	+				+0.1
3,350,351	+				+0.0
3,350,351	+				+0.0
3,350,351	+				-0.5
3,350,351	+				-0.1
3,350,352	-				+0.4
3,350,352	-				+0.5
3,350,352	-				-0.4
3,350,352	-				+0.5
3,350,352	-				-0.4
3,350,352	-				+0.1
3,350,352	-				-0.2
3,350,352	-				-0.4
3,350,390	+				-0.1
3,350,391	-				+0.4
3,350,391	-				-0.1
3,350,391	-				-0.6
3,350,424	+				+0.2
3,350,424	+				+0.5
3,350,424	+				-1.3
3,350,427	+				-1.5
3,350,427	+				+2.7
3,350,427	+				+0.3
3,350,427	+				+1.0
3,350,427	+				-0.9
3,350,428	-				-0.7
3,350,428	-				-0.2
3,350,428	-				-0.4
3,350,428	-				+0.1
3,350,428	-				+0.9
3,350,432	-				-1.0
3,350,432	-				-0.2
3,350,432	-				-0.4
3,350,506	+		DDA3937_RS14635	0.10	+0.4
3,350,538	+		DDA3937_RS14635	0.14	+0.6
3,350,637	+		DDA3937_RS14635	0.27	+0.4
3,350,887	-		DDA3937_RS14635	0.58	-2.1