Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14600

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,340,035	-				-2.3
3,340,069	+				-1.8
3,340,069	+				-2.0
3,340,070	-				-0.3
3,340,070	-				-0.7
3,340,073	-				-1.8
3,340,073	-				-1.0
3,340,073	-				-1.0
3,340,073	-				-0.2
3,340,080	+				-0.7
3,340,081	-				+0.8
3,340,083	-				-0.4
3,340,102	+				-1.0
3,340,102	+				-0.6
3,340,103	-				+1.5
3,340,127	+				-0.4
3,340,375	+				-1.1
3,340,375	+				-0.4
3,340,376	-				+0.0
3,340,376	-				+1.5
3,340,376	-				-1.5
3,340,376	-				+1.6
3,340,378	+				-0.1
3,340,379	-				-0.8
3,340,379	-				+0.5
3,340,456	-				-0.4
3,340,527	-				-2.3
3,340,527	-				-0.3
3,340,568	+				-0.7
3,340,569	-				-1.0
3,340,604	+				-0.3
3,340,605	-				+1.4
3,340,605	-				-0.9
3,340,763	+				+0.3
3,340,796	+				+0.2
3,340,813	+				+0.4
3,340,813	+				-0.3
3,340,891	-				+0.0
3,340,891	-				-0.7
3,340,891	-				+0.5
3,341,081	+				+0.2
3,341,094	+				-0.2
3,341,095	-				-0.2
3,341,095	-				-1.1
3,341,095	-				-1.8
3,341,283	+		DDA3937_RS14600	0.15	-0.3
3,341,389	+		DDA3937_RS14600	0.20	+0.6
3,341,509	+		DDA3937_RS14600	0.25	+0.4
3,341,509	+		DDA3937_RS14600	0.25	-1.1
3,341,604	+		DDA3937_RS14600	0.30	-1.0
3,341,628	+		DDA3937_RS14600	0.31	-1.1
3,341,628	+		DDA3937_RS14600	0.31	+0.5
3,341,628	+		DDA3937_RS14600	0.31	-1.2
3,341,628	+		DDA3937_RS14600	0.31	-0.2
3,341,629	-		DDA3937_RS14600	0.31	-0.5
3,341,651	+		DDA3937_RS14600	0.32	+0.9
3,341,652	-		DDA3937_RS14600	0.32	-0.2
3,341,652	-		DDA3937_RS14600	0.32	-2.7
3,341,652	-		DDA3937_RS14600	0.32	-0.6
3,341,666	-		DDA3937_RS14600	0.33	+0.0
3,341,769	+		DDA3937_RS14600	0.37	-0.9
3,341,770	-		DDA3937_RS14600	0.37	+0.3
3,341,780	+		DDA3937_RS14600	0.38	-0.1
3,341,780	+		DDA3937_RS14600	0.38	-0.1
3,341,781	-		DDA3937_RS14600	0.38	-1.3
3,341,839	+		DDA3937_RS14600	0.40	-0.5
3,342,091	+		DDA3937_RS14600	0.52	-1.6
3,342,091	+		DDA3937_RS14600	0.52	-2.1
3,342,091	+				-0.5
3,342,091	+		DDA3937_RS14600	0.52	-0.7
3,342,092	-		DDA3937_RS14600	0.52	-0.3
3,342,092	-		DDA3937_RS14600	0.52	+0.4
3,342,092	-		DDA3937_RS14600	0.52	+0.5
3,342,092	-		DDA3937_RS14600	0.52	-0.9
3,342,313	-		DDA3937_RS14600	0.62	-0.1
3,342,325	+		DDA3937_RS14600	0.63	-1.1
3,342,325	+		DDA3937_RS14600	0.63	-0.0
3,342,362	-		DDA3937_RS14600	0.64	-0.6
3,342,437	+		DDA3937_RS14600	0.68	-0.5
3,342,438	-		DDA3937_RS14600	0.68	+1.2
3,342,438	-		DDA3937_RS14600	0.68	-0.5
3,342,441	+		DDA3937_RS14600	0.68	-0.7
3,342,441	+		DDA3937_RS14600	0.68	-0.7
3,342,441	+		DDA3937_RS14600	0.68	-0.3
3,342,442	-		DDA3937_RS14600	0.68	+0.5
3,342,442	-		DDA3937_RS14600	0.68	-0.1
3,342,442	-		DDA3937_RS14600	0.68	-0.6
3,342,442	-		DDA3937_RS14600	0.68	-0.5
3,342,442	-		DDA3937_RS14600	0.68	-1.1
3,342,442	-		DDA3937_RS14600	0.68	-0.5
3,342,442	-		DDA3937_RS14600	0.68	-0.7
3,342,456	-		DDA3937_RS14600	0.69	+1.3
3,342,505	+		DDA3937_RS14600	0.71	-0.4
3,342,724	+		DDA3937_RS14600	0.81	-0.2
3,342,725	-		DDA3937_RS14600	0.81	-0.2
3,343,076	+				-0.1
3,343,076	+				-0.3
3,343,124	+				+0.0
3,343,124	+				-1.7
3,343,125	-				+0.0
3,343,494	-		DDA3937_RS14605	0.26	-0.8
3,343,544	+		DDA3937_RS14605	0.30	+0.5
3,343,545	-		DDA3937_RS14605	0.30	-0.2
3,343,548	+		DDA3937_RS14605	0.30	-0.8
3,343,548	+		DDA3937_RS14605	0.30	+0.4
3,343,548	+		DDA3937_RS14605	0.30	+0.2
3,343,548	+		DDA3937_RS14605	0.30	-0.4
3,343,548	+		DDA3937_RS14605	0.30	-0.1
3,343,548	+		DDA3937_RS14605	0.30	-0.1
3,343,549	-		DDA3937_RS14605	0.31	-1.0
3,343,549	-		DDA3937_RS14605	0.31	+0.2
3,343,549	-		DDA3937_RS14605	0.31	-1.3
3,343,549	-		DDA3937_RS14605	0.31	-0.8
3,343,549	-		DDA3937_RS14605	0.31	-0.9
3,343,549	-		DDA3937_RS14605	0.31	-0.1
3,343,549	-		DDA3937_RS14605	0.31	-0.3
3,343,549	-		DDA3937_RS14605	0.31	-1.2
3,343,686	+		DDA3937_RS14605	0.41	-0.4
3,343,698	-		DDA3937_RS14605	0.42	+1.1
3,343,725	+		DDA3937_RS14605	0.44	+0.2
3,343,725	+		DDA3937_RS14605	0.44	+0.5
3,343,725	+		DDA3937_RS14605	0.44	-1.8
3,343,726	-		DDA3937_RS14605	0.44	+0.1
3,343,753	-		DDA3937_RS14605	0.46	-0.8
3,343,754	+				-1.1
3,343,755	-		DDA3937_RS14605	0.46	+0.5
3,343,792	+		DDA3937_RS14605	0.49	+0.2
3,343,871	+		DDA3937_RS14605	0.55	+0.2
3,343,872	-		DDA3937_RS14605	0.55	-0.5
3,343,922	+		DDA3937_RS14605	0.59	-1.8
3,343,923	-		DDA3937_RS14605	0.59	-0.1
3,343,951	+		DDA3937_RS14605	0.61	+0.9