Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14475

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,314,746	+		DDA3937_RS14470	0.18	+0.8
3,314,824	-		DDA3937_RS14470	0.25	-2.0
3,314,913	+		DDA3937_RS14470	0.34	-1.7
3,315,115	-		DDA3937_RS14470	0.54	-0.9
3,315,203	+		DDA3937_RS14470	0.63	-1.0
3,315,378	+		DDA3937_RS14470	0.80	+1.1
3,315,378	+		DDA3937_RS14470	0.80	-1.5
3,315,378	+		DDA3937_RS14470	0.80	-1.1
3,315,476	-		DDA3937_RS14470	0.90	+2.8
3,315,606	+				+1.5
3,315,606	+				-0.1
3,315,607	-				+0.5
3,315,665	+				-0.1
3,315,770	+				-1.1
3,315,848	+		DDA3937_RS14475	0.16	-0.8
3,315,848	+		DDA3937_RS14475	0.16	-1.1
3,315,848	+		DDA3937_RS14475	0.16	-0.2
3,315,848	+		DDA3937_RS14475	0.16	-0.5
3,315,848	+		DDA3937_RS14475	0.16	-4.1
3,315,848	+		DDA3937_RS14475	0.16	-2.3
3,315,849	-		DDA3937_RS14475	0.16	-0.8
3,315,849	-				-1.5
3,315,849	-		DDA3937_RS14475	0.16	-1.1
3,315,849	-		DDA3937_RS14475	0.16	-3.0
3,315,849	-		DDA3937_RS14475	0.16	-1.1
3,315,905	-		DDA3937_RS14475	0.21	-1.0
3,316,023	+		DDA3937_RS14475	0.32	-1.7
3,316,036	-				-0.5
3,316,036	-		DDA3937_RS14475	0.33	-1.1
3,316,275	+		DDA3937_RS14475	0.54	+0.5
3,316,307	-		DDA3937_RS14475	0.57	+0.5
3,316,307	-				-0.5
3,316,426	+		DDA3937_RS14475	0.67	+2.1
3,316,505	+		DDA3937_RS14475	0.74	-1.1
3,316,505	+		DDA3937_RS14475	0.74	+0.5
3,316,505	+		DDA3937_RS14475	0.74	-1.1
3,316,505	+		DDA3937_RS14475	0.74	+2.7
3,316,505	+				+0.5
3,316,505	+				-0.5
3,316,506	-		DDA3937_RS14475	0.74	-1.5
3,316,506	-		DDA3937_RS14475	0.74	+0.5
3,316,506	-		DDA3937_RS14475	0.74	-1.5
3,316,506	-				-1.5
3,316,506	-		DDA3937_RS14475	0.74	-0.5
3,316,506	-		DDA3937_RS14475	0.74	-2.3
3,316,767	-				-1.1
3,316,773	+				-2.5
3,316,773	+				-1.1
3,316,774	-				-0.4
3,316,786	+				-0.5
3,316,858	+		DDA3937_RS23285	0.35	+3.3
3,317,015	+				+0.7
3,317,015	+				-0.1
3,317,015	+				-0.0
3,317,015	+				-0.6
3,317,015	+				+0.3
3,317,016	-				+0.1
3,317,016	-				+0.7
3,317,022	+				+1.2
3,317,023	-				-0.5
3,317,023	-				-0.9
3,317,102	-				+0.2
3,317,295	+		DDA3937_RS14480	0.19	+0.5
3,317,315	+		DDA3937_RS14480	0.21	+0.1
3,317,316	-		DDA3937_RS14480	0.21	-0.3
3,317,316	-		DDA3937_RS14480	0.21	-0.4
3,317,560	+		DDA3937_RS14480	0.39	+0.1
3,317,716	-		DDA3937_RS14480	0.50	+0.2
3,317,716	-		DDA3937_RS14480	0.50	-0.8