Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS14325 and DDA3937_RS14330 are separated by 117 nucleotides DDA3937_RS14330 and DDA3937_RS14335 are separated by 19 nucleotides DDA3937_RS14335 and DDA3937_RS14340 are separated by 636 nucleotides
DDA3937_RS14325: DDA3937_RS14325 - NADH-quinone oxidoreductase subunit C/D, at 3,283,992 to 3,285,791
_RS14325
DDA3937_RS14330: DDA3937_RS14330 - NADH-quinone oxidoreductase subunit B, at 3,285,909 to 3,286,583
_RS14330
DDA3937_RS14335: DDA3937_RS14335 - NADH-quinone oxidoreductase subunit A, at 3,286,603 to 3,287,046
_RS14335
DDA3937_RS14340: DDA3937_RS14340 - transcriptional regulator LrhA, at 3,287,683 to 3,288,633
_RS14340
Position (kb)
3286
3287
3288 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3285.810 kb on - strand at 3285.819 kb on - strand at 3285.890 kb on - strand at 3286.605 kb on - strand at 3287.154 kb on - strand at 3287.195 kb on - strand at 3287.195 kb on - strand at 3287.195 kb on - strand at 3287.198 kb on + strand at 3287.237 kb on - strand at 3287.357 kb on + strand at 3287.389 kb on + strand at 3287.390 kb on - strand at 3287.390 kb on - strand at 3287.396 kb on - strand at 3287.396 kb on - strand at 3287.398 kb on + strand at 3287.399 kb on - strand at 3287.404 kb on + strand at 3287.436 kb on + strand at 3287.436 kb on + strand at 3287.436 kb on + strand at 3287.436 kb on + strand at 3287.437 kb on - strand at 3287.442 kb on - strand at 3287.444 kb on + strand at 3287.548 kb on + strand at 3287.549 kb on - strand at 3287.552 kb on - strand at 3287.575 kb on + strand at 3287.575 kb on + strand at 3287.575 kb on + strand at 3287.575 kb on + strand at 3287.576 kb on - strand at 3287.576 kb on - strand at 3287.576 kb on - strand at 3287.576 kb on - strand at 3287.577 kb on + strand at 3287.577 kb on + strand at 3287.577 kb on + strand at 3287.577 kb on + strand at 3287.577 kb on + strand at 3287.578 kb on - strand at 3287.578 kb on - strand at 3287.644 kb on + strand at 3287.645 kb on - strand at 3287.673 kb on - strand at 3287.681 kb on - strand at 3287.681 kb on - strand at 3287.689 kb on - strand at 3287.689 kb on - strand at 3287.692 kb on - strand at 3287.840 kb on + strand, within DDA3937_RS14340 at 3287.840 kb on + strand, within DDA3937_RS14340 at 3287.973 kb on + strand, within DDA3937_RS14340 at 3287.974 kb on - strand, within DDA3937_RS14340 at 3287.974 kb on - strand, within DDA3937_RS14340 at 3287.984 kb on + strand, within DDA3937_RS14340 at 3288.004 kb on - strand, within DDA3937_RS14340
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,285,810 - -1.1 3,285,819 - -1.1 3,285,890 - -0.4 3,286,605 - -0.4 3,287,154 - +0.5 3,287,195 - +0.0 3,287,195 - +1.1 3,287,195 - -0.7 3,287,198 + +1.1 3,287,237 - +0.2 3,287,357 + +0.1 3,287,389 + -0.2 3,287,390 - -0.7 3,287,390 - -0.6 3,287,396 - +0.3 3,287,396 - -1.7 3,287,398 + -0.5 3,287,399 - +0.3 3,287,404 + +0.5 3,287,436 + -0.0 3,287,436 + -0.5 3,287,436 + +2.2 3,287,436 + -0.6 3,287,437 - +2.4 3,287,442 - +1.2 3,287,444 + +1.2 3,287,548 + -1.0 3,287,549 - +0.5 3,287,552 - +1.2 3,287,575 + +0.4 3,287,575 + -0.1 3,287,575 + -0.2 3,287,575 + -0.6 3,287,576 - -0.3 3,287,576 - -0.8 3,287,576 - -2.7 3,287,576 - +0.1 3,287,577 + +0.2 3,287,577 + +0.5 3,287,577 + -1.7 3,287,577 + -0.2 3,287,577 + -0.1 3,287,578 - +0.7 3,287,578 - -0.7 3,287,644 + -0.3 3,287,645 - +0.2 3,287,673 - -0.0 3,287,681 - +0.0 3,287,681 - -0.5 3,287,689 - -1.1 3,287,689 - -1.3 3,287,692 - -0.4 3,287,840 + DDA3937_RS14340 0.17 -1.6 3,287,840 + DDA3937_RS14340 0.17 -0.1 3,287,973 + DDA3937_RS14340 0.30 -0.5 3,287,974 - DDA3937_RS14340 0.31 -0.1 3,287,974 - DDA3937_RS14340 0.31 +0.5 3,287,984 + DDA3937_RS14340 0.32 -1.3 3,288,004 - DDA3937_RS14340 0.34 -0.1
Or see this region's nucleotide sequence