Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14190

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,250,443	+		DDA3937_RS14185	0.21	+0.2
3,250,444	-		DDA3937_RS14185	0.21	-0.4
3,250,444	-		DDA3937_RS14185	0.21	-0.8
3,250,452	+		DDA3937_RS14185	0.22	+0.2
3,250,452	+		DDA3937_RS14185	0.22	-0.4
3,250,453	-		DDA3937_RS14185	0.22	+0.5
3,250,453	-		DDA3937_RS14185	0.22	+1.1
3,250,453	-		DDA3937_RS14185	0.22	+1.5
3,250,692	-		DDA3937_RS14185	0.55	-0.5
3,250,692	-		DDA3937_RS14185	0.55	-0.3
3,250,692	-		DDA3937_RS14185	0.55	-0.8
3,251,016	+				-0.7
3,251,017	-				+0.2
3,251,063	+				+0.2
3,251,064	-				+0.1
3,251,096	-				+1.2
3,251,120	+				-0.2
3,251,121	-				+0.3
3,251,185	-				-0.5
3,251,190	+				+0.5
3,251,196	+		DDA3937_RS14190	0.12	-2.3
3,251,197	-		DDA3937_RS14190	0.12	-0.7
3,251,288	+		DDA3937_RS14190	0.31	+0.7
3,251,288	+		DDA3937_RS14190	0.31	-1.0
3,251,288	+		DDA3937_RS14190	0.31	-0.8
3,251,288	+		DDA3937_RS14190	0.31	+0.9
3,251,288	+		DDA3937_RS14190	0.31	+0.0
3,251,289	-				-1.1
3,251,289	-		DDA3937_RS14190	0.31	+0.5
3,251,289	-		DDA3937_RS14190	0.31	+0.4
3,251,289	-		DDA3937_RS14190	0.31	-0.1
3,251,304	+		DDA3937_RS14190	0.34	-0.6
3,251,319	+		DDA3937_RS14190	0.37	-1.8
3,251,319	+		DDA3937_RS14190	0.37	+0.9
3,251,319	+		DDA3937_RS14190	0.37	-2.7
3,251,320	-		DDA3937_RS14190	0.38	-1.8
3,251,320	-		DDA3937_RS14190	0.38	-0.1
3,251,320	-		DDA3937_RS14190	0.38	-0.3
3,251,375	-				-0.5
3,251,375	-		DDA3937_RS14190	0.49	-1.8
3,251,416	+		DDA3937_RS14190	0.58	-0.8
3,251,430	+		DDA3937_RS14190	0.61	+0.2
3,251,430	+		DDA3937_RS14190	0.61	-0.9
3,251,430	+		DDA3937_RS14190	0.61	-0.7
3,251,431	-		DDA3937_RS14190	0.61	-1.1
3,251,431	-		DDA3937_RS14190	0.61	+0.5
3,251,431	-		DDA3937_RS14190	0.61	+0.5
3,251,431	-		DDA3937_RS14190	0.61	-1.2
3,251,431	-		DDA3937_RS14190	0.61	-0.5
3,251,445	+		DDA3937_RS14190	0.64	+0.5
3,251,455	-		DDA3937_RS14190	0.66	-1.1
3,251,481	+		DDA3937_RS14190	0.71	-0.1
3,251,481	+		DDA3937_RS14190	0.71	-0.4
3,251,481	+		DDA3937_RS14190	0.71	+0.8
3,251,482	-		DDA3937_RS14190	0.71	-0.5
3,251,482	-		DDA3937_RS14190	0.71	-1.1
3,251,482	-		DDA3937_RS14190	0.71	-1.5
3,251,482	-		DDA3937_RS14190	0.71	-1.1
3,251,482	-		DDA3937_RS14190	0.71	-1.1
3,251,482	-		DDA3937_RS14190	0.71	+1.5
3,251,508	+		DDA3937_RS14190	0.77	-0.5
3,251,508	+		DDA3937_RS14190	0.77	-0.2
3,251,509	-		DDA3937_RS14190	0.77	-0.4
3,251,509	-		DDA3937_RS14190	0.77	-0.6
3,251,600	-				-1.3
3,251,638	+				-0.1
3,251,638	+				+0.2
3,251,638	+				-0.5
3,251,638	+				-0.5
3,251,638	+				-0.0
3,251,638	+				+0.5
3,251,638	+				+0.1
3,251,638	+				-2.7
3,251,639	-				-0.5
3,251,639	-				+1.1
3,251,639	-				-0.9
3,251,639	-				-0.7
3,251,683	-				-0.2
3,251,705	+				-1.0
3,251,712	+				+0.3
3,251,828	+				-1.4
3,251,828	+				-0.7
3,251,829	-				+0.0
3,251,829	-				-0.4
3,251,829	-				-0.1
3,251,829	-				+0.0
3,251,829	-				-0.0
3,252,205	+		DDA3937_RS14195	0.21	-0.1
3,252,385	-		DDA3937_RS14195	0.29	-0.4
3,252,385	-		DDA3937_RS14195	0.29	+0.6
3,252,385	-		DDA3937_RS14195	0.29	-0.2
3,252,385	-		DDA3937_RS14195	0.29	-0.5