Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13930

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,165,406	+				-0.5
3,165,406	+				+0.9
3,165,407	-				-1.7
3,165,440	-		DDA3937_RS22355	0.16	-1.1
3,165,517	-		DDA3937_RS22355	0.73	-1.7
3,165,517	-		DDA3937_RS22355	0.73	+0.5
3,165,551	+				-1.1
3,165,552	-				-2.1
3,165,574	+				-1.1
3,165,575	-				-1.9
3,165,575	-				-2.2
3,165,792	+		DDA3937_RS13920	0.77	-1.8
3,165,822	-				-1.1
3,165,822	-		DDA3937_RS13920	0.86	-1.8
3,165,841	-				-0.6
3,165,844	-				-2.9
3,165,848	+				-0.5
3,165,848	+				+1.0
3,165,849	-				-0.7
3,165,851	-				-0.9
3,165,864	+				+0.5
3,165,865	-				-2.1
3,165,865	-				-1.9
3,165,869	-				-1.6
3,165,869	-				-2.1
3,165,869	-				-2.5
3,165,881	-				-2.8
3,165,921	+		DDA3937_RS13925	0.23	+0.9
3,165,944	+		DDA3937_RS13925	0.32	+0.5
3,166,085	+				-1.7
3,166,085	+				-1.2
3,166,086	-				-2.1
3,166,086	-				-0.9
3,166,086	-				+1.3
3,166,117	+				-1.6
3,166,117	+				-0.7
3,166,117	+				-1.5
3,166,118	-				-1.2
3,166,124	+				-1.6
3,166,124	+				-0.5
3,166,124	+				-1.0
3,166,125	-				+0.6
3,166,125	-				-2.1
3,166,125	-				-0.4
3,166,125	-				-1.1
3,166,135	+				-1.4
3,166,135	+				+0.3
3,166,135	+				-2.1
3,166,135	+				+1.1
3,166,135	+				+2.1
3,166,136	-				-1.1
3,166,136	-				-2.1
3,166,147	+				-1.3
3,166,147	+				-1.9
3,166,147	+				-0.1
3,166,148	-				-0.7
3,166,148	-				-2.1
3,166,153	+				-0.7
3,166,153	+				-1.2
3,166,153	+				-0.9
3,166,153	+				-0.2
3,166,153	+				+0.5
3,166,154	-				-0.4
3,166,154	-				-0.5
3,166,154	-				-1.6
3,166,158	+				-2.7
3,166,158	+				-0.4
3,166,159	-				-0.4
3,166,235	-				-0.5
3,166,235	-				-1.7
3,166,306	+				+0.5
3,166,306	+				-3.1
3,166,306	+				-0.3
3,166,307	-				-0.1
3,166,307	-				-0.6
3,166,336	+				-1.7
3,166,343	+				-0.5
3,166,344	-				-2.5
3,166,359	+				-1.5
3,166,359	+				-2.7
3,166,359	+				-2.3
3,166,359	+				+0.3
3,166,360	-				-1.5
3,166,363	-				-0.7
3,166,363	-				-0.6
3,166,368	+				-3.2
3,166,368	+				-1.1
3,166,369	-				-0.6
3,166,369	-				-0.7
3,166,371	+				-1.1
3,166,371	+				-1.1
3,166,371	+				+0.2
3,166,371	+				-1.5
3,166,494	+		DDA3937_RS13930	0.42	-0.8
3,166,494	+		DDA3937_RS13930	0.42	-0.8
3,166,495	-		DDA3937_RS13930	0.42	-0.1
3,166,573	+		DDA3937_RS13930	0.70	-1.0
3,166,573	+				-0.5
3,166,574	-		DDA3937_RS13930	0.70	-1.1
3,166,576	-		DDA3937_RS13930	0.71	-1.9
3,166,714	+				-1.5
3,166,739	+				-1.6
3,166,739	+				-1.3
3,166,739	+				-1.5
3,166,739	+				-1.5
3,166,739	+				-0.8
3,166,739	+				-2.7
3,166,740	-				-1.7
3,166,740	-				-1.1
3,166,740	-				-0.5
3,166,836	+				-1.8
3,166,836	+				+0.5
3,166,837	-				-0.6
3,166,868	+				+0.7
3,166,868	+				+1.6
3,166,878	-				+1.8
3,166,906	+				+0.7
3,166,906	+				+1.2
3,167,011	+				-0.9
3,167,063	+				-1.9
3,167,064	-				+1.9
3,167,068	-				+1.1
3,167,125	-				+1.2
3,167,180	+				-1.7
3,167,246	+				-1.5
3,167,308	+				+0.1
3,167,308	+				-2.9
3,167,308	+				-1.9
3,167,309	-				+1.4
3,167,329	-				+1.8
3,167,380	+				-1.7
3,167,380	+				-1.3
3,167,381	-				+1.0
3,167,444	-				+0.5
3,167,444	-				+1.2
3,167,452	-				+2.1
3,167,455	+				-1.5
3,167,455	+				-2.8
3,167,499	-				+1.9
3,167,503	+				-1.1
3,167,503	+				-0.5
3,167,503	+				-0.9
3,167,503	+				-1.7
3,167,503	+				-1.5
3,167,504	-				+1.1
3,167,504	-				+1.9
3,167,504	-				+1.7
3,167,504	-				+1.0
3,167,507	+				-2.7
3,167,508	-				+1.0
3,167,508	-				+2.5
3,167,508	-				-2.1
3,167,603	-		DDA3937_RS13935	0.20	+0.8