Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13735

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,125,714	-				-0.1
3,125,733	+				+0.3
3,125,734	-				+0.7
3,125,744	-				+0.2
3,125,744	-				+0.4
3,125,744	-				+1.3
3,125,744	-				+0.0
3,125,757	+				-0.0
3,125,757	+				+0.4
3,125,758	-				-1.8
3,125,758	-				-1.3
3,125,758	-				+0.8
3,125,775	+				-0.7
3,125,795	+				-0.1
3,126,028	-				-0.7
3,126,064	+				-0.7
3,126,068	+				-1.1
3,126,068	+				-0.1
3,126,068	+				-0.5
3,126,069	-				+0.3
3,126,069	-				-0.6
3,126,074	+				+1.1
3,126,075	-				-0.4
3,126,078	+				+0.8
3,126,078	+				-2.3
3,126,079	-				-0.6
3,126,079	-				-0.9
3,126,082	-				-1.4
3,126,082	-				+0.8
3,126,146	+				-0.3
3,126,156	+				-0.1
3,126,189	+				-1.6
3,126,189	+				+1.2
3,126,190	-				-0.3
3,126,190	-				+0.5
3,126,190	-				+1.2
3,126,192	+				+0.5
3,126,192	+				+0.5
3,126,264	-				+0.1
3,126,264	-				-1.8
3,126,331	-				+0.1
3,126,331	-				-0.4
3,126,348	+				+0.7
3,126,411	+				-0.1
3,126,427	+				+0.6
3,126,427	+				+0.0
3,126,476	+		DDA3937_RS13730	0.55	-1.5
3,126,476	+		DDA3937_RS13730	0.55	+2.7
3,126,542	+				+1.1
3,126,565	+				+0.2
3,126,575	+				-0.3
3,126,679	+				+0.2
3,126,702	+				-0.1
3,126,756	+				-0.5
3,126,756	+				-0.6
3,126,756	+				-0.1
3,126,757	-				-0.9
3,126,757	-				+0.5
3,126,757	-				+1.2
3,126,786	-				-1.1
3,126,795	-				+0.9
3,126,805	+		DDA3937_RS13735	0.10	-0.4
3,126,806	-		DDA3937_RS13735	0.11	+0.5
3,126,828	+		DDA3937_RS13735	0.12	-0.0
3,126,828	+				+0.5
3,126,829	-		DDA3937_RS13735	0.12	+0.5
3,126,829	-		DDA3937_RS13735	0.12	-0.2
3,126,832	+		DDA3937_RS13735	0.13	-0.1
3,126,833	-		DDA3937_RS13735	0.13	-0.8
3,126,836	+		DDA3937_RS13735	0.13	-0.6
3,126,837	-		DDA3937_RS13735	0.13	-1.1
3,126,837	-		DDA3937_RS13735	0.13	-0.2
3,126,846	+		DDA3937_RS13735	0.14	+0.8
3,126,886	+		DDA3937_RS13735	0.17	+0.0
3,126,904	+		DDA3937_RS13735	0.18	+0.6
3,126,904	+		DDA3937_RS13735	0.18	+0.9
3,127,049	+		DDA3937_RS13735	0.29	+0.2
3,127,212	+		DDA3937_RS13735	0.42	+1.0
3,127,213	-		DDA3937_RS13735	0.42	-0.5
3,127,213	-		DDA3937_RS13735	0.42	+0.4
3,127,246	+		DDA3937_RS13735	0.45	+0.2
3,127,247	-		DDA3937_RS13735	0.45	+0.4
3,127,271	+		DDA3937_RS13735	0.47	+0.5
3,127,297	-		DDA3937_RS13735	0.49	+0.6
3,127,435	+		DDA3937_RS13735	0.60	+0.1
3,127,447	+		DDA3937_RS13735	0.60	-0.5
3,127,520	-		DDA3937_RS13735	0.66	-0.4
3,127,520	-		DDA3937_RS13735	0.66	-1.8
3,127,520	-		DDA3937_RS13735	0.66	+0.5
3,127,550	-		DDA3937_RS13735	0.68	-0.3
3,127,563	+		DDA3937_RS13735	0.69	-0.1
3,127,563	+		DDA3937_RS13735	0.69	-1.4
3,127,564	-		DDA3937_RS13735	0.70	+0.5
3,127,564	-		DDA3937_RS13735	0.70	+0.9
3,127,564	-		DDA3937_RS13735	0.70	-0.4
3,127,593	+		DDA3937_RS13735	0.72	-0.4
3,127,594	-		DDA3937_RS13735	0.72	-0.1
3,127,616	+		DDA3937_RS13735	0.74	-0.8
3,127,617	-		DDA3937_RS13735	0.74	+0.1
3,127,619	-		DDA3937_RS13735	0.74	-0.5
3,127,619	-		DDA3937_RS13735	0.74	-0.2
3,127,653	+		DDA3937_RS13735	0.76	+0.0
3,127,653	+		DDA3937_RS13735	0.76	+1.0
3,127,653	+		DDA3937_RS13735	0.76	-0.0
3,127,654	-		DDA3937_RS13735	0.77	+0.4
3,127,805	+		DDA3937_RS13735	0.88	+0.0
3,127,805	+		DDA3937_RS13735	0.88	-0.5
3,127,805	+		DDA3937_RS13735	0.88	+0.5
3,127,805	+		DDA3937_RS13735	0.88	+1.0
3,127,805	+		DDA3937_RS13735	0.88	-0.4
3,127,805	+		DDA3937_RS13735	0.88	-1.5
3,127,806	-		DDA3937_RS13735	0.88	-0.8
3,127,806	-				-1.3
3,127,806	-		DDA3937_RS13735	0.88	-0.3
3,127,806	-		DDA3937_RS13735	0.88	+0.8
3,127,806	-		DDA3937_RS13735	0.88	-0.0
3,127,806	-		DDA3937_RS13735	0.88	+0.6
3,127,813	+		DDA3937_RS13735	0.89	-0.7
3,127,813	+		DDA3937_RS13735	0.89	-0.5
3,127,813	+		DDA3937_RS13735	0.89	+0.9
3,127,823	+		DDA3937_RS13735	0.90	-1.1
3,127,865	+				+0.1
3,127,889	+				+0.1
3,127,890	-				+0.4
3,127,901	+				+1.1
3,127,901	+				-0.4
3,127,907	+				+1.0
3,127,907	+				-1.8
3,127,908	-				-0.4
3,127,908	-				+0.0
3,127,935	+				-0.5
3,127,936	-				-0.0
3,127,962	+				+1.6
3,127,963	-				+0.8
3,127,963	-				-1.3
3,128,000	+				-0.1
3,128,000	+				-0.0
3,128,000	+				-0.4
3,128,000	+				-1.6
3,128,001	-				-0.1
3,128,001	-				-0.2
3,128,001	-				-1.1
3,128,001	-				+0.8
3,128,001	-				-0.0
3,128,001	-				-1.1
3,128,026	+				+0.5
3,128,062	-				+0.0
3,128,062	-				-0.2
3,128,062	-				+0.6
3,128,179	+		DDA3937_RS13740	0.22	-0.9
3,128,179	+		DDA3937_RS13740	0.22	-1.1
3,128,179	+		DDA3937_RS13740	0.22	+0.9
3,128,180	-		DDA3937_RS13740	0.23	-0.4
3,128,224	+		DDA3937_RS13740	0.37	-0.3
3,128,225	-		DDA3937_RS13740	0.37	-0.5
3,128,225	-		DDA3937_RS13740	0.37	+0.2
3,128,273	-		DDA3937_RS13740	0.53	-0.9
3,128,637	-				-0.2
3,128,798	+				-1.1
3,128,799	-				-0.5
3,128,832	+				+1.5
3,128,833	-				-0.2
3,128,833	-				+0.1
3,128,918	+				+1.5
3,128,918	+				+1.7