Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13145

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,996,441	-		DDA3937_RS13135	0.30	-1.1
2,996,451	+		DDA3937_RS13135	0.31	-1.9
2,996,451	+		DDA3937_RS13135	0.31	-2.2
2,996,543	+		DDA3937_RS13135	0.40	-0.3
2,996,543	+		DDA3937_RS13135	0.40	-1.9
2,996,543	+		DDA3937_RS13135	0.40	-1.4
2,996,543	+		DDA3937_RS13135	0.40	-0.3
2,996,544	-				-1.9
2,996,544	-		DDA3937_RS13135	0.40	-0.9
2,996,544	-		DDA3937_RS13135	0.40	-1.6
2,996,544	-		DDA3937_RS13135	0.40	+0.4
2,996,544	-		DDA3937_RS13135	0.40	+0.4
2,996,547	+		DDA3937_RS13135	0.40	-0.1
2,996,559	+		DDA3937_RS13135	0.41	-0.6
2,996,589	+		DDA3937_RS13135	0.44	-0.9
2,996,636	-		DDA3937_RS13135	0.49	-1.6
2,996,701	+		DDA3937_RS13135	0.55	-2.1
2,996,701	+		DDA3937_RS13135	0.55	-2.7
2,996,824	+		DDA3937_RS13135	0.66	+0.4
2,996,916	+		DDA3937_RS13135	0.75	-1.0
2,996,916	+		DDA3937_RS13135	0.75	-2.9
2,996,917	-		DDA3937_RS13135	0.75	+0.4
2,996,917	-		DDA3937_RS13135	0.75	-0.1
2,996,917	-		DDA3937_RS13135	0.75	-1.0
2,996,917	-		DDA3937_RS13135	0.75	+0.2
2,996,917	-		DDA3937_RS13135	0.75	-1.4
2,996,917	-		DDA3937_RS13135	0.75	-1.6
2,996,917	-		DDA3937_RS13135	0.75	-1.1
2,996,917	-		DDA3937_RS13135	0.75	-0.1
2,996,940	+		DDA3937_RS13135	0.78	-2.1
2,997,085	-				-0.1
2,997,118	-				-0.3
2,997,152	-				-1.0
2,997,202	+				-1.9
2,997,286	-		DDA3937_RS13140	0.50	-1.6
2,997,286	-		DDA3937_RS13140	0.50	-1.7
2,997,379	-				-2.6
2,997,379	-				-1.9
2,997,401	-				-2.1
2,997,410	-				-0.4
2,997,413	-				-0.6
2,997,529	-				-0.6
2,997,594	-		DDA3937_RS13145	0.39	-1.4
2,997,845	+		DDA3937_RS13145	0.88	-1.6
2,997,846	-		DDA3937_RS13145	0.88	-2.3
2,997,846	-		DDA3937_RS13145	0.88	-1.7
2,997,846	-		DDA3937_RS13145	0.88	+0.9
2,997,846	-		DDA3937_RS13145	0.88	-1.4
2,997,846	-		DDA3937_RS13145	0.88	-1.3
2,997,898	+				-0.1
2,997,921	-				-1.6
2,998,028	+				-1.5
2,998,046	+				+0.8
2,998,047	-				-0.1
2,998,051	+				+0.1
2,998,051	+				+0.4
2,998,051	+				-0.4
2,998,052	-				+0.9
2,998,052	-				+2.8
2,998,069	+				+0.3
2,998,069	+				+1.0
2,998,069	+				-0.8
2,998,069	+				-0.8
2,998,070	-				+0.0
2,998,070	-				-0.4
2,998,070	-				-0.7
2,998,070	-				-1.0
2,998,070	-				+0.7
2,998,147	+		DDA3937_RS13150	0.13	-0.4
2,998,148	-		DDA3937_RS13150	0.13	-2.0
2,998,261	+		DDA3937_RS13150	0.33	+0.0
2,998,262	-		DDA3937_RS13150	0.33	+1.3
2,998,262	-		DDA3937_RS13150	0.33	-0.1
2,998,264	+		DDA3937_RS13150	0.33	+0.8
2,998,301	-		DDA3937_RS13150	0.39	-0.2
2,998,335	+		DDA3937_RS13150	0.45	-0.3
2,998,336	-		DDA3937_RS13150	0.45	-0.4
2,998,344	+		DDA3937_RS13150	0.47	-0.4
2,998,345	-		DDA3937_RS13150	0.47	-1.1
2,998,345	-		DDA3937_RS13150	0.47	+0.3
2,998,345	-		DDA3937_RS13150	0.47	+0.2
2,998,345	-		DDA3937_RS13150	0.47	+0.4
2,998,428	+		DDA3937_RS13150	0.61	-0.1
2,998,428	+		DDA3937_RS13150	0.61	-0.2
2,998,443	+		DDA3937_RS13150	0.64	-0.9
2,998,443	+		DDA3937_RS13150	0.64	-0.1
2,998,444	-		DDA3937_RS13150	0.64	-0.0
2,998,444	-		DDA3937_RS13150	0.64	+0.0
2,998,445	+		DDA3937_RS13150	0.64	+0.0
2,998,481	+		DDA3937_RS13150	0.70	-0.2
2,998,482	-		DDA3937_RS13150	0.70	-0.1
2,998,482	-		DDA3937_RS13150	0.70	-0.9
2,998,482	-		DDA3937_RS13150	0.70	-0.8
2,998,482	-		DDA3937_RS13150	0.70	-2.9
2,998,482	-		DDA3937_RS13150	0.70	-0.4
2,998,522	+		DDA3937_RS13150	0.77	-0.6
2,998,522	+		DDA3937_RS13150	0.77	+1.0
2,998,579	+		DDA3937_RS13150	0.87	-0.7
2,998,579	+		DDA3937_RS13150	0.87	-3.0
2,998,580	-		DDA3937_RS13150	0.87	-1.6
2,998,580	-		DDA3937_RS13150	0.87	-0.5
2,998,594	-		DDA3937_RS13150	0.90	+0.3
2,998,603	+				+0.5
2,998,604	-				+0.4
2,998,604	-				-0.6
2,998,645	-				+0.1
2,998,647	+				-0.0
2,998,647	+				+0.4
2,998,647	+				-1.1
2,998,647	+				-0.1
2,998,647	+				-0.3
2,998,648	-				-0.4
2,998,648	-				+0.1
2,998,715	-				-0.1
2,998,786	+				-0.4
2,998,787	-				+0.0
2,998,787	-				+0.9