Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13055

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,980,847	-		DDA3937_RS13050	0.18	-0.3
2,980,998	+		DDA3937_RS13050	0.33	-0.6
2,980,999	-		DDA3937_RS13050	0.33	+1.5
2,980,999	-		DDA3937_RS13050	0.33	+0.4
2,981,037	+		DDA3937_RS13050	0.37	-0.2
2,981,038	-		DDA3937_RS13050	0.37	-0.2
2,981,038	-		DDA3937_RS13050	0.37	+0.0
2,981,227	+		DDA3937_RS13050	0.55	-0.4
2,981,459	-		DDA3937_RS13050	0.78	-1.6
2,981,666	+				-1.2
2,981,666	+				+0.2
2,981,666	+				+0.1
2,981,666	+				+0.1
2,981,667	-				-1.7
2,981,698	+				+0.3
2,981,699	-				+0.0
2,981,699	-				-0.6
2,981,699	-				-0.5
2,981,699	-				+1.5
2,981,699	-				-0.7
2,981,705	-				+0.0
2,981,705	-				+0.0
2,981,705	-				-0.6
2,981,708	-				-1.4
2,981,708	-				+0.6
2,981,849	+				-1.4
2,981,850	-				-1.2
2,981,900	+		DDA3937_RS13055	0.12	+1.4
2,981,976	-		DDA3937_RS13055	0.21	+0.2
2,981,976	-		DDA3937_RS13055	0.21	-0.8
2,982,102	+		DDA3937_RS13055	0.35	+1.4
2,982,228	+		DDA3937_RS13055	0.50	+0.5
2,982,229	-		DDA3937_RS13055	0.50	+0.2
2,982,229	-		DDA3937_RS13055	0.50	-0.1
2,982,229	-		DDA3937_RS13055	0.50	-0.2
2,982,229	-		DDA3937_RS13055	0.50	-0.2
2,982,577	+				+0.3
2,982,577	+				+1.2
2,982,578	-				+0.2
2,982,578	-				-0.2
2,982,655	+				-0.2
2,982,747	+		DDA3937_RS13060	0.18	-2.4
2,982,756	+		DDA3937_RS13060	0.20	-0.6
2,982,756	+		DDA3937_RS13060	0.20	-0.2
2,982,794	-		DDA3937_RS13060	0.26	-0.4
2,982,874	+		DDA3937_RS13060	0.40	-1.4
2,982,874	+		DDA3937_RS13060	0.40	-0.9
2,982,874	+				-1.9
2,982,903	+				-0.2
2,982,903	+		DDA3937_RS13060	0.45	-0.6
2,983,178	-				-1.2
2,983,241	-				-0.2
2,983,241	-				+0.7
2,983,263	+				+0.1
2,983,272	-				+0.8
2,983,272	-				+1.2
2,983,316	-		DDA3937_RS13065	0.17	+1.1
2,983,316	-		DDA3937_RS13065	0.17	+0.6
2,983,321	+		DDA3937_RS13065	0.18	-0.6
2,983,322	-		DDA3937_RS13065	0.19	+0.2
2,983,386	+		DDA3937_RS13065	0.35	+0.8
2,983,386	+		DDA3937_RS13065	0.35	-1.9
2,983,387	-		DDA3937_RS13065	0.36	-1.9
2,983,387	-		DDA3937_RS13065	0.36	-0.7
2,983,438	+		DDA3937_RS13065	0.49	+0.4
2,983,546	+		DDA3937_RS13065	0.77	+0.0
2,983,546	+		DDA3937_RS13065	0.77	-0.8