Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12440

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,830,819	+		DDA3937_RS12435	0.62	+0.5
2,830,820	-				-0.1
2,830,838	+				+1.3
2,830,933	-		DDA3937_RS12435	0.72	+0.8
2,830,933	-		DDA3937_RS12435	0.72	-1.1
2,830,965	+		DDA3937_RS12435	0.74	-0.5
2,830,966	-		DDA3937_RS12435	0.75	-0.9
2,830,988	+		DDA3937_RS12435	0.76	-0.6
2,830,988	+		DDA3937_RS12435	0.76	-0.7
2,830,989	-		DDA3937_RS12435	0.76	+0.4
2,831,058	+		DDA3937_RS12435	0.82	-1.1
2,831,058	+		DDA3937_RS12435	0.82	-1.5
2,831,108	-		DDA3937_RS12435	0.86	+0.7
2,831,108	-		DDA3937_RS12435	0.86	-0.0
2,831,246	-				+0.9
2,831,268	+				+1.5
2,831,269	-				+0.1
2,831,269	-				+1.3
2,831,269	-				-0.7
2,831,338	+				-1.2
2,831,338	+				+0.1
2,831,338	+				+0.4
2,831,338	+				-3.0
2,831,338	+				-0.1
2,831,338	+				-0.9
2,831,338	+				+1.3
2,831,339	-				+0.3
2,831,339	-				+0.3
2,831,339	-				-0.7
2,831,339	-				+0.5
2,831,339	-				+0.1
2,831,339	-				-0.1
2,831,382	+				-0.6
2,831,382	+				-0.3
2,831,383	-				-0.0
2,831,383	-				-0.0
2,831,383	-				-0.5
2,831,383	-				-0.4
2,831,403	+				-0.3
2,831,403	+				+0.4
2,831,404	-				-0.1
2,831,404	-				-0.3
2,831,407	+				-0.1
2,831,407	+				-0.7
2,831,407	+				-0.3
2,831,407	+				+0.3
2,831,408	-				-0.3
2,831,408	-				-0.4
2,831,408	-				-1.1
2,831,408	-				-1.4
2,831,460	+				-0.0
2,831,467	-				-2.9
2,831,505	+				+1.0
2,831,505	+				-1.5
2,831,505	+				+0.7
2,831,505	+				+1.0
2,831,505	+				+0.6
2,831,736	+		DDA3937_RS12440	0.12	-2.3
2,831,736	+		DDA3937_RS12440	0.12	+0.9
2,831,763	+		DDA3937_RS12440	0.13	-2.0
2,831,763	+		DDA3937_RS12440	0.13	-0.7
2,831,826	+				+0.3
2,831,915	+		DDA3937_RS12440	0.22	+0.3
2,831,979	+		DDA3937_RS12440	0.26	-0.1
2,832,010	+		DDA3937_RS12440	0.28	-0.7
2,832,010	+		DDA3937_RS12440	0.28	-1.1
2,832,011	-		DDA3937_RS12440	0.28	-1.7
2,832,099	+		DDA3937_RS12440	0.33	-0.7
2,832,124	-		DDA3937_RS12440	0.34	-3.0
2,832,124	-		DDA3937_RS12440	0.34	-0.7
2,832,222	+		DDA3937_RS12440	0.40	-2.3
2,832,222	+		DDA3937_RS12440	0.40	-2.0
2,832,222	+				-1.3
2,832,223	-		DDA3937_RS12440	0.40	-0.8
2,832,537	+		DDA3937_RS12440	0.58	-2.0
2,832,588	+		DDA3937_RS12440	0.61	-2.5
2,832,615	+		DDA3937_RS12440	0.63	-0.4
2,832,705	+		DDA3937_RS12440	0.68	-0.9
2,832,705	+		DDA3937_RS12440	0.68	-2.0
2,832,705	+		DDA3937_RS12440	0.68	-1.0
2,832,705	+				+0.3
2,832,706	-		DDA3937_RS12440	0.68	-1.3
2,832,927	+		DDA3937_RS12440	0.81	-1.1
2,832,927	+		DDA3937_RS12440	0.81	-0.7
2,833,008	+		DDA3937_RS12440	0.86	+0.5
2,833,008	+		DDA3937_RS12440	0.86	-0.8
2,833,290	+				-2.0
2,833,325	+				-0.0
2,833,325	+				+0.1
2,833,325	+				-2.9
2,833,326	-				-2.9
2,833,328	+				-2.5
2,833,329	-				+1.0
2,833,783	-		DDA3937_RS12445	0.56	-0.3
2,833,858	+		DDA3937_RS12445	0.64	-0.5
2,833,883	+		DDA3937_RS12445	0.66	-2.0
2,834,032	+		DDA3937_RS12445	0.82	-0.7
2,834,033	-		DDA3937_RS12445	0.82	-1.0
2,834,137	+				+0.5
2,834,138	-				-1.4
2,834,185	+				+0.2
2,834,185	+				-0.5
2,834,195	+				-1.4
2,834,196	-				-0.1
2,834,214	+				-0.4
2,834,214	+				-2.3
2,834,215	-				-0.3