Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11970

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,721,712	+		DDA3937_RS11965	0.55	-0.2
2,721,712	+		DDA3937_RS11965	0.55	-0.5
2,721,712	+		DDA3937_RS11965	0.55	-0.2
2,721,712	+		DDA3937_RS11965	0.55	-0.3
2,721,712	+		DDA3937_RS11965	0.55	+0.7
2,721,713	-		DDA3937_RS11965	0.55	+0.4
2,721,713	-				-0.7
2,721,848	+		DDA3937_RS11965	0.62	+0.1
2,721,934	+		DDA3937_RS11965	0.66	-1.1
2,721,938	+		DDA3937_RS11965	0.66	-1.1
2,721,938	+		DDA3937_RS11965	0.66	+1.4
2,721,938	+		DDA3937_RS11965	0.66	-0.2
2,721,939	-		DDA3937_RS11965	0.66	-0.5
2,722,106	+		DDA3937_RS11965	0.75	-2.1
2,722,107	-		DDA3937_RS11965	0.75	-0.5
2,722,185	+		DDA3937_RS11965	0.79	-0.7
2,722,241	+		DDA3937_RS11965	0.81	-0.2
2,722,274	+		DDA3937_RS11965	0.83	-0.7
2,722,275	-		DDA3937_RS11965	0.83	-1.1
2,722,275	-		DDA3937_RS11965	0.83	-0.1
2,722,275	-		DDA3937_RS11965	0.83	+0.9
2,722,374	+		DDA3937_RS11965	0.88	-1.1
2,722,374	+		DDA3937_RS11965	0.88	-1.0
2,722,383	-		DDA3937_RS11965	0.88	-1.3
2,722,400	+		DDA3937_RS11965	0.89	+0.3
2,722,589	-				-1.0
2,722,691	+				-1.1
2,722,789	+		DDA3937_RS11970	0.21	+0.1
2,722,789	+		DDA3937_RS11970	0.21	-1.0
2,722,790	-		DDA3937_RS11970	0.21	-1.9
2,723,081	+		DDA3937_RS11970	0.61	-1.7
2,723,081	+		DDA3937_RS11970	0.61	-0.8
2,723,082	-		DDA3937_RS11970	0.61	-0.1
2,723,082	-		DDA3937_RS11970	0.61	+0.0
2,723,155	-		DDA3937_RS11970	0.71	-0.4
2,723,155	-		DDA3937_RS11970	0.71	-1.9
2,723,178	+		DDA3937_RS11970	0.74	-0.3
2,723,179	-		DDA3937_RS11970	0.74	-0.1
2,723,179	-		DDA3937_RS11970	0.74	-0.6
2,723,324	-				-0.7
2,723,338	+				-1.4
2,723,341	+				-1.7
2,723,353	+				-0.3
2,723,353	+				-1.7
2,723,354	-				-1.3
2,723,382	+				-1.7
2,723,383	-				+0.3
2,723,383	-				-1.1
2,723,425	+				-0.2
2,723,425	+				-0.3
2,723,427	+				-0.4
2,723,427	+				-0.7
2,723,427	+				-0.6
2,723,427	+				-0.5
2,723,428	-				+0.3
2,723,428	-				-1.7
2,723,428	-				-1.1
2,723,428	-				-1.0
2,723,449	+				-0.5
2,723,449	+				-0.4
2,723,449	+				-1.1
2,723,450	-				-2.7
2,723,450	-				+1.3
2,723,450	-				-0.5
2,723,450	-				-0.3
2,723,455	-				+0.6
2,723,471	-				+0.5
2,723,471	-				-0.1
2,723,471	-				+0.6
2,723,519	+		DDA3937_RS11975	0.13	-1.7
2,723,800	+		DDA3937_RS11975	0.68	+1.3
2,723,867	-		DDA3937_RS11975	0.82	+1.3
2,723,876	+		DDA3937_RS11975	0.83	+1.6
2,723,879	+		DDA3937_RS11975	0.84	+1.0
2,723,879	+				-0.1
2,723,880	-		DDA3937_RS11975	0.84	+0.5
2,723,880	-				+0.3
2,723,908	+		DDA3937_RS11975	0.90	-1.7
2,723,908	+		DDA3937_RS11975	0.90	-0.1
2,723,909	-				-1.5
2,723,941	-				+2.1
2,723,959	+				-0.7
2,723,959	+				-0.2
2,723,969	+				+0.6
2,723,969	+				+0.7
2,723,970	-				+0.1
2,723,970	-				-0.5
2,723,970	-				+0.5
2,723,975	+				+1.3
2,723,975	+				-2.3
2,723,975	+				+0.9
2,723,975	+				-1.5
2,723,975	+				-1.0
2,723,975	+				+0.0
2,723,975	+				+0.3
2,723,975	+				-0.7
2,723,976	-				-0.7
2,723,976	-				-0.5
2,723,976	-				-0.2
2,723,986	+				-1.6
2,724,021	+				-0.7
2,724,022	-				-0.8
2,724,022	-				+0.5
2,724,025	-				+1.4
2,724,045	+				-1.6
2,724,045	+				-0.9
2,724,063	-				-0.7
2,724,195	-				-0.5
2,724,226	+				+1.0
2,724,227	-				-1.1
2,724,231	+				-0.2
2,724,232	-				-0.6
2,724,232	-				+0.3
2,724,236	+				-1.7
2,724,236	+				-1.3
2,724,236	+				-0.0
2,724,237	-				-2.3
2,724,237	-				-0.5
2,724,239	+				+0.4
2,724,239	+				+1.1
2,724,239	+				-0.7
2,724,239	+				-1.1
2,724,239	+				+0.0
2,724,240	-				+0.3
2,724,240	-				-1.1
2,724,240	-				+0.9
2,724,240	-				-0.6
2,724,240	-				+0.0
2,724,246	+				-0.2
2,724,279	+				-1.2