Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11875

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,697,661	+				+0.1
2,697,661	+				-1.4
2,697,861	+		DDA3937_RS11870	0.31	+1.3
2,697,862	-		DDA3937_RS11870	0.31	+0.0
2,697,906	+		DDA3937_RS11870	0.36	-1.1
2,697,907	-		DDA3937_RS11870	0.37	-0.1
2,697,911	+		DDA3937_RS11870	0.37	-1.1
2,697,990	-		DDA3937_RS11870	0.46	-0.6
2,698,072	-		DDA3937_RS11870	0.55	-0.8
2,698,080	+		DDA3937_RS11870	0.56	-0.7
2,698,165	-		DDA3937_RS11870	0.66	-1.7
2,698,449	+				-1.0
2,698,572	+				-0.3
2,698,577	+				-0.1
2,698,725	+		DDA3937_RS11875	0.24	-1.9
2,698,885	-		DDA3937_RS11875	0.39	-0.5
2,698,896	+				-1.7
2,698,924	-		DDA3937_RS11875	0.43	-0.2
2,699,063	+		DDA3937_RS11875	0.56	+0.5
2,699,232	+		DDA3937_RS11875	0.72	+0.3
2,699,232	+		DDA3937_RS11875	0.72	-0.3
2,699,242	+		DDA3937_RS11875	0.73	-1.1
2,699,299	-		DDA3937_RS11875	0.78	-1.3
2,699,346	+		DDA3937_RS11875	0.82	-3.6
2,699,400	-		DDA3937_RS11875	0.88	-0.7
2,699,531	+				-1.5
2,699,685	+				-0.0
2,699,685	+				-0.4
2,699,734	+				-0.2
2,699,933	+				+0.2
2,699,933	+				+0.5
2,699,933	+				-0.7
2,699,933	+				-0.3
2,699,933	+				-0.1
2,699,954	+				-1.3
2,699,954	+				+0.6
2,699,955	-				+0.1
2,699,969	-				+0.3
2,699,996	-				-1.3
2,700,085	+		DDA3937_RS11880	0.29	-0.2
2,700,085	+		DDA3937_RS11880	0.29	-1.1
2,700,086	-		DDA3937_RS11880	0.30	-1.4
2,700,136	-		DDA3937_RS11880	0.43	+0.3
2,700,147	+		DDA3937_RS11880	0.46	-0.4
2,700,169	-		DDA3937_RS11880	0.52	+0.3
2,700,169	-		DDA3937_RS11880	0.52	+0.7
2,700,169	-		DDA3937_RS11880	0.52	-0.5
2,700,169	-		DDA3937_RS11880	0.52	-0.2
2,700,169	-		DDA3937_RS11880	0.52	-0.9
2,700,169	-		DDA3937_RS11880	0.52	-0.5
2,700,169	-		DDA3937_RS11880	0.52	+0.6
2,700,173	-		DDA3937_RS11880	0.53	+0.6
2,700,218	+		DDA3937_RS11880	0.65	-0.3
2,700,219	-		DDA3937_RS11880	0.65	-0.0
2,700,219	-		DDA3937_RS11880	0.65	-0.6
2,700,219	-				+0.5
2,700,221	+		DDA3937_RS11880	0.65	-0.7
2,700,221	+		DDA3937_RS11880	0.65	-2.1
2,700,222	-		DDA3937_RS11880	0.66	-1.1
2,700,222	-		DDA3937_RS11880	0.66	+0.3
2,700,306	+		DDA3937_RS11880	0.88	-0.6
2,700,306	+		DDA3937_RS11880	0.88	-0.0
2,700,307	-		DDA3937_RS11880	0.88	-1.0
2,700,415	-		DDA3937_RS11885	0.30	-0.5
2,700,415	-		DDA3937_RS11885	0.30	+0.6
2,700,431	-		DDA3937_RS11885	0.37	-0.9
2,700,459	+		DDA3937_RS11885	0.50	+0.6
2,700,459	+		DDA3937_RS11885	0.50	-0.9
2,700,460	-		DDA3937_RS11885	0.50	-0.8
2,700,460	-		DDA3937_RS11885	0.50	-0.7
2,700,485	+		DDA3937_RS11885	0.62	+0.2
2,700,486	-		DDA3937_RS11885	0.62	+0.5
2,700,486	-		DDA3937_RS11885	0.62	-0.9
2,700,515	+		DDA3937_RS11885	0.75	+0.5
2,700,515	+		DDA3937_RS11885	0.75	+0.3
2,700,516	-		DDA3937_RS11885	0.76	-0.4
2,700,516	-		DDA3937_RS11885	0.76	-1.3
2,700,516	-		DDA3937_RS11885	0.76	-0.7