Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11315

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,570,197	-				+0.2
2,570,197	-				+1.5
2,570,206	-				+0.1
2,570,220	-				-0.2
2,570,295	+				-0.5
2,570,296	-				+1.8
2,570,318	+				-1.9
2,570,334	-				+0.2
2,570,351	+				-1.0
2,570,354	+				-0.3
2,570,354	+				+0.2
2,570,488	+				+0.4
2,570,505	+				-0.6
2,570,505	+				-1.1
2,570,507	+				+1.3
2,570,507	+				+0.2
2,570,508	-				+0.6
2,570,510	+				+0.5
2,570,514	-				+0.7
2,570,523	+				-0.8
2,570,524	-				-0.4
2,570,524	-				-3.1
2,570,524	-				-0.0
2,570,524	-				+1.0
2,570,524	-				-0.7
2,570,524	-				-0.8
2,570,526	+				-1.2
2,570,526	+				-0.1
2,570,526	+				-1.0
2,570,526	+				-0.7
2,570,526	+				-0.2
2,570,527	-				+0.8
2,570,527	-				-0.9
2,570,527	-				-1.3
2,570,530	+				-0.1
2,570,531	-				-0.5
2,570,532	+				+1.2
2,570,533	-				-2.6
2,570,533	-				-1.2
2,570,547	+				+0.0
2,570,650	+				+0.5
2,570,651	-				+0.8
2,570,651	-				-2.1
2,570,651	-				-1.0
2,570,651	-				-0.2
2,570,662	-				-0.6
2,570,703	-				+0.2
2,570,717	+				+0.2
2,570,734	+				-0.4
2,570,734	+				-0.3
2,570,735	-				-0.1
2,570,769	+				+0.6
2,570,821	+				+0.7
2,570,927	-				-1.8
2,570,961	+				-0.3
2,570,961	+				+0.5
2,571,005	-				-0.6
2,571,086	+				+2.2
2,571,087	-				-0.2
2,571,087	-				-1.0
2,571,087	-				+2.2
2,571,103	+				-0.5
2,571,108	+				-0.5
2,571,108	+				-0.2
2,571,108	+				-2.1
2,571,109	-				-0.6
2,571,109	-				+0.2
2,571,109	-				-0.6
2,571,109	-				-0.8
2,571,142	+				-0.7
2,571,142	+				-0.5
2,571,142	+				-1.4
2,571,142	+				-0.8
2,571,142	+				-0.8
2,571,143	-				-0.2
2,571,143	-				-0.0
2,571,143	-				-1.3
2,571,143	-				+0.2
2,571,143	-				-0.4
2,571,143	-				-1.8
2,571,143	-				-1.0
2,571,143	-				-1.0
2,571,193	+				-0.2
2,571,214	-				-1.4
2,571,395	+		DDA3937_RS11315	0.29	-1.8
2,571,395	+		DDA3937_RS11315	0.29	-0.9
2,571,416	+		DDA3937_RS11315	0.32	-1.0
2,571,417	-		DDA3937_RS11315	0.32	-1.3
2,571,531	+		DDA3937_RS11315	0.45	-0.2
2,571,531	+		DDA3937_RS11315	0.45	+0.1
2,571,532	-		DDA3937_RS11315	0.45	-1.3
2,571,595	+		DDA3937_RS11315	0.53	+0.2
2,571,595	+		DDA3937_RS11315	0.53	+0.7
2,571,595	+		DDA3937_RS11315	0.53	-1.3
2,571,596	-		DDA3937_RS11315	0.53	-0.8
2,571,596	-		DDA3937_RS11315	0.53	-1.3
2,571,708	+		DDA3937_RS11315	0.66	+0.8
2,571,708	+		DDA3937_RS11315	0.66	-0.3
2,571,708	+		DDA3937_RS11315	0.66	-0.6
2,571,758	+		DDA3937_RS11315	0.72	+0.0
2,571,761	+		DDA3937_RS11315	0.72	-0.1
2,571,762	-		DDA3937_RS11315	0.72	-0.9
2,571,807	+		DDA3937_RS11315	0.77	-3.3
2,571,848	+		DDA3937_RS11315	0.82	-0.8
2,571,858	-		DDA3937_RS11315	0.83	+0.7
2,571,909	-		DDA3937_RS11315	0.89	-1.2
2,571,917	+				+1.0
2,571,917	+				-0.4
2,571,918	-				-0.2
2,571,918	-				-0.4
2,571,921	-				-0.5
2,571,921	-				-0.2
2,571,921	-				-0.4
2,571,996	+				-0.5
2,571,996	+				-1.5
2,571,997	-				-0.9
2,571,997	-				+0.2
2,571,997	-				-0.1
2,572,042	+				+0.1
2,572,043	-				-0.3
2,572,043	-				-0.4
2,572,113	+		DDA3937_RS11320	0.12	-0.1
2,572,113	+		DDA3937_RS11320	0.12	+0.0
2,572,113	+		DDA3937_RS11320	0.12	-1.5
2,572,113	+		DDA3937_RS11320	0.12	-0.6
2,572,113	+		DDA3937_RS11320	0.12	-1.3
2,572,113	+		DDA3937_RS11320	0.12	+0.5
2,572,113	+		DDA3937_RS11320	0.12	-0.0
2,572,113	+		DDA3937_RS11320	0.12	-0.7
2,572,113	+		DDA3937_RS11320	0.12	-1.3
2,572,113	+		DDA3937_RS11320	0.12	-1.3
2,572,114	-		DDA3937_RS11320	0.12	+0.2
2,572,114	-		DDA3937_RS11320	0.12	+0.1
2,572,114	-		DDA3937_RS11320	0.12	+0.7
2,572,114	-		DDA3937_RS11320	0.12	-0.3
2,572,114	-		DDA3937_RS11320	0.12	-0.2
2,572,114	-		DDA3937_RS11320	0.12	-0.2
2,572,114	-		DDA3937_RS11320	0.12	-0.8
2,572,114	-		DDA3937_RS11320	0.12	-1.8
2,572,114	-		DDA3937_RS11320	0.12	-0.3
2,572,114	-		DDA3937_RS11320	0.12	-0.8
2,572,114	-		DDA3937_RS11320	0.12	-0.3
2,572,114	-		DDA3937_RS11320	0.12	-0.7
2,572,114	-		DDA3937_RS11320	0.12	-0.3
2,572,139	-		DDA3937_RS11320	0.17	-0.6
2,572,142	-				-1.3
2,572,142	-		DDA3937_RS11320	0.17	-0.2
2,572,142	-		DDA3937_RS11320	0.17	+0.7
2,572,152	-		DDA3937_RS11320	0.19	+0.3
2,572,186	+		DDA3937_RS11320	0.26	-0.0
2,572,186	+		DDA3937_RS11320	0.26	+0.7
2,572,243	+		DDA3937_RS11320	0.36	-0.6
2,572,277	+		DDA3937_RS11320	0.42	+1.8
2,572,311	+		DDA3937_RS11320	0.48	+0.5
2,572,311	+		DDA3937_RS11320	0.48	-1.3
2,572,312	-		DDA3937_RS11320	0.48	+0.3
2,572,312	-		DDA3937_RS11320	0.48	-0.5
2,572,312	-		DDA3937_RS11320	0.48	+0.2
2,572,377	+		DDA3937_RS11320	0.60	+0.2
2,572,489	+		DDA3937_RS11320	0.81	+0.1
2,572,490	-		DDA3937_RS11320	0.81	-0.6
2,572,490	-		DDA3937_RS11320	0.81	-0.1
2,572,490	-		DDA3937_RS11320	0.81	-1.5
2,572,490	-		DDA3937_RS11320	0.81	+0.1
2,572,490	-		DDA3937_RS11320	0.81	-0.5
2,572,507	+		DDA3937_RS11320	0.84	-0.2
2,572,507	+		DDA3937_RS11320	0.84	-1.1
2,572,587	+				+0.3
2,572,587	+				+1.2
2,572,587	+				-0.0
2,572,588	-				-0.4
2,572,649	+				-0.3
2,572,650	-				-0.9
2,572,650	-				-0.7
2,572,650	-				+1.8
2,572,658	-				-1.3
2,572,674	+				+0.9
2,572,771	-				+1.5
2,572,832	-				-1.1
2,572,834	+				-0.8
2,572,834	+				-1.1
2,572,834	+				-1.3
2,572,834	+				-0.3
2,572,835	-				-0.3
2,572,835	-				-0.8
2,572,835	-				+0.6
2,572,837	+				-0.0
2,572,838	-				+1.6
2,572,838	-				+0.7
2,572,838	-				-0.3
2,572,838	-				-0.3
2,572,910	-		DDA3937_RS11325	0.19	-0.3
2,572,912	+		DDA3937_RS11325	0.20	-0.1
2,572,912	+		DDA3937_RS11325	0.20	+0.4
2,572,912	+		DDA3937_RS11325	0.20	-0.9
2,572,913	-		DDA3937_RS11325	0.20	+0.5
2,572,913	-		DDA3937_RS11325	0.20	+0.8
2,572,941	+		DDA3937_RS11325	0.29	+0.7
2,572,941	+		DDA3937_RS11325	0.29	-0.5
2,572,942	-		DDA3937_RS11325	0.29	+0.2
2,572,942	-		DDA3937_RS11325	0.29	-0.1
2,572,943	+		DDA3937_RS11325	0.29	+0.4
2,572,943	+		DDA3937_RS11325	0.29	+0.2
2,572,943	+		DDA3937_RS11325	0.29	+0.2
2,572,943	+		DDA3937_RS11325	0.29	+0.2
2,572,943	+		DDA3937_RS11325	0.29	-0.3
2,572,943	+				-0.3
2,572,943	+		DDA3937_RS11325	0.29	+0.3
2,572,944	-		DDA3937_RS11325	0.29	-0.3
2,572,944	-		DDA3937_RS11325	0.29	-0.1
2,572,944	-		DDA3937_RS11325	0.29	-1.3
2,572,944	-		DDA3937_RS11325	0.29	+1.6
2,572,944	-		DDA3937_RS11325	0.29	-0.6
2,572,944	-		DDA3937_RS11325	0.29	+0.7
2,572,944	-		DDA3937_RS11325	0.29	-0.9
2,572,944	-		DDA3937_RS11325	0.29	-0.1
2,572,944	-		DDA3937_RS11325	0.29	+0.8
2,572,944	-		DDA3937_RS11325	0.29	+0.8
2,572,944	-		DDA3937_RS11325	0.29	-0.5