Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10685

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,405,246	-				-0.0
2,405,322	+				-0.4
2,405,329	+				-2.1
2,405,329	+				+1.7
2,405,330	-				-0.7
2,405,330	-				-2.2
2,405,370	+				-0.9
2,405,370	+				+0.1
2,405,388	+		DDA3937_RS10680	0.10	-1.7
2,405,388	+		DDA3937_RS10680	0.10	-0.7
2,405,419	-		DDA3937_RS10680	0.15	-0.4
2,405,419	-		DDA3937_RS10680	0.15	-0.9
2,405,419	-		DDA3937_RS10680	0.15	-1.8
2,405,421	+		DDA3937_RS10680	0.15	+1.1
2,405,421	+		DDA3937_RS10680	0.15	-0.1
2,405,421	+		DDA3937_RS10680	0.15	+0.3
2,405,421	+		DDA3937_RS10680	0.15	-0.3
2,405,421	+		DDA3937_RS10680	0.15	+0.8
2,405,421	+		DDA3937_RS10680	0.15	+0.1
2,405,421	+		DDA3937_RS10680	0.15	-0.4
2,405,421	+		DDA3937_RS10680	0.15	-0.3
2,405,422	-		DDA3937_RS10680	0.15	-1.2
2,405,422	-		DDA3937_RS10680	0.15	-0.4
2,405,422	-		DDA3937_RS10680	0.15	-0.7
2,405,422	-		DDA3937_RS10680	0.15	-0.6
2,405,426	+		DDA3937_RS10680	0.16	-1.4
2,405,428	+		DDA3937_RS10680	0.16	-1.2
2,405,428	+		DDA3937_RS10680	0.16	-1.5
2,405,429	-		DDA3937_RS10680	0.17	+0.5
2,405,436	+		DDA3937_RS10680	0.18	-0.3
2,405,473	+		DDA3937_RS10680	0.23	-1.7
2,405,522	+		DDA3937_RS10680	0.30	-1.1
2,405,522	+		DDA3937_RS10680	0.30	-1.3
2,405,588	+		DDA3937_RS10680	0.40	+0.6
2,405,589	-		DDA3937_RS10680	0.40	+1.8
2,405,610	+		DDA3937_RS10680	0.43	+0.7
2,405,635	+		DDA3937_RS10680	0.47	-1.1
2,405,668	+		DDA3937_RS10680	0.52	-0.5
2,405,668	+		DDA3937_RS10680	0.52	-0.7
2,405,668	+		DDA3937_RS10680	0.52	-0.5
2,405,669	-		DDA3937_RS10680	0.52	-0.8
2,405,669	-		DDA3937_RS10680	0.52	-0.7
2,405,669	-		DDA3937_RS10680	0.52	+0.0
2,405,694	-				+0.3
2,405,855	+		DDA3937_RS10680	0.80	+0.3
2,405,855	+		DDA3937_RS10680	0.80	+0.1
2,405,855	+		DDA3937_RS10680	0.80	-0.4
2,405,913	+		DDA3937_RS10680	0.89	-0.9
2,405,914	-		DDA3937_RS10680	0.89	+0.8
2,405,954	+				+0.2
2,405,954	+				+0.3
2,405,955	-				-0.4
2,405,974	+				-0.7
2,405,974	+				-1.2
2,405,987	+				-1.1
2,405,987	+				+0.3
2,405,988	-				+1.1
2,406,036	+				-0.5
2,406,067	-				-0.1
2,406,067	-				-1.3
2,406,259	-				+0.1
2,406,273	+		DDA3937_RS10685	0.14	-0.3
2,406,273	+				-0.3
2,406,273	+		DDA3937_RS10685	0.14	-1.2
2,406,273	+		DDA3937_RS10685	0.14	-1.9
2,406,273	+		DDA3937_RS10685	0.14	-1.1
2,406,274	-				+1.8
2,406,274	-		DDA3937_RS10685	0.15	-1.2
2,406,274	-		DDA3937_RS10685	0.15	+0.5
2,406,274	-		DDA3937_RS10685	0.15	-0.7
2,406,274	-		DDA3937_RS10685	0.15	+0.1
2,406,274	-		DDA3937_RS10685	0.15	-1.7
2,406,274	-		DDA3937_RS10685	0.15	-0.3
2,406,274	-		DDA3937_RS10685	0.15	-0.1
2,406,274	-		DDA3937_RS10685	0.15	-1.0
2,406,275	-		DDA3937_RS10685	0.15	+0.3
2,406,300	-		DDA3937_RS10685	0.24	+0.1
2,406,300	-		DDA3937_RS10685	0.24	-1.5
2,406,300	-		DDA3937_RS10685	0.24	-0.0
2,406,379	-		DDA3937_RS10685	0.51	-0.7
2,406,403	+		DDA3937_RS10685	0.59	-0.8
2,406,477	+		DDA3937_RS10685	0.85	-0.2
2,406,478	-		DDA3937_RS10685	0.85	+0.3
2,406,478	-		DDA3937_RS10685	0.85	-1.0
2,406,478	-				-2.1
2,406,478	-		DDA3937_RS10685	0.85	+0.5
2,406,488	-		DDA3937_RS10685	0.89	+0.0
2,406,505	+				-0.8
2,406,506	-				-1.0
2,406,506	-				+0.4
2,406,506	-				-1.1
2,406,584	-				+0.1
2,406,584	-				+0.4
2,406,585	+				-0.2
2,406,773	+		DDA3937_RS10690	0.49	+0.4
2,406,773	+		DDA3937_RS10690	0.49	+0.8
2,406,774	-		DDA3937_RS10690	0.50	-0.3
2,406,776	+		DDA3937_RS10690	0.50	+0.3
2,406,863	+		DDA3937_RS10690	0.75	-1.1
2,406,864	-		DDA3937_RS10690	0.75	+1.3
2,406,864	-		DDA3937_RS10690	0.75	-1.7
2,406,903	-		DDA3937_RS10690	0.86	-0.5
2,406,930	+				+1.6
2,406,931	-				-1.0
2,406,931	-				+1.6
2,406,931	-				-1.1
2,406,935	+				-0.2
2,406,936	-				-0.4
2,406,981	+				+0.8
2,406,981	+				-0.3
2,406,981	+				+0.3
2,406,981	+				+1.4
2,406,982	-				-1.3
2,406,982	-				+1.5
2,406,982	-				+0.8
2,407,009	+				+0.7
2,407,018	+				-0.2
2,407,018	+				+2.3
2,407,018	+				-0.7
2,407,018	+				+1.0
2,407,019	-				+0.5
2,407,020	+				-0.6
2,407,045	-				+0.0
2,407,045	-				+1.4
2,407,046	+				-0.3
2,407,071	-				+0.3
2,407,103	+				-0.0
2,407,103	+				-0.3
2,407,103	+				-0.2
2,407,103	+				-0.2
2,407,103	+				-0.0
2,407,104	-				+0.7
2,407,104	-				+0.8
2,407,104	-				-1.3
2,407,105	+				-0.8
2,407,106	-				-0.3
2,407,106	-				-0.2
2,407,156	+				+0.1
2,407,157	-				-1.0
2,407,157	-				+0.4
2,407,178	+				-0.7
2,407,244	-				-0.2
2,407,260	+				+0.6
2,407,378	-		DDA3937_RS10695	0.20	-0.2
2,407,416	-		DDA3937_RS10695	0.25	-0.7