Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10675

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,402,964	+				+0.1
2,402,964	+				+0.6
2,402,964	+				+2.0
2,402,964	+				+0.5
2,402,964	+				+1.1
2,402,964	+				+0.5
2,402,964	+				+0.0
2,402,964	+				-1.3
2,402,964	+				-0.1
2,402,964	+				-0.3
2,402,964	+				+0.3
2,402,964	+				-1.0
2,402,964	+				+0.3
2,402,965	-				-0.2
2,402,965	-				-0.0
2,402,965	-				+0.1
2,402,965	-				-0.0
2,402,965	-				-0.7
2,402,965	-				+0.3
2,402,965	-				-0.4
2,402,966	+				-0.5
2,402,966	+				+1.3
2,402,967	-				-0.6
2,402,967	-				-1.3
2,402,967	-				-0.1
2,402,967	-				+0.1
2,402,967	-				-0.1
2,402,993	+		DDA3937_RS10670	0.12	-0.6
2,402,993	+		DDA3937_RS10670	0.12	-0.1
2,403,050	+		DDA3937_RS10670	0.18	-0.4
2,403,050	+		DDA3937_RS10670	0.18	+0.5
2,403,050	+		DDA3937_RS10670	0.18	-0.4
2,403,050	+		DDA3937_RS10670	0.18	-0.3
2,403,155	+		DDA3937_RS10670	0.30	+0.1
2,403,155	+		DDA3937_RS10670	0.30	+0.1
2,403,395	+		DDA3937_RS10670	0.56	+0.3
2,403,395	+		DDA3937_RS10670	0.56	-1.2
2,403,395	+		DDA3937_RS10670	0.56	+0.1
2,403,395	+		DDA3937_RS10670	0.56	-0.4
2,403,396	-		DDA3937_RS10670	0.56	-1.3
2,403,396	-		DDA3937_RS10670	0.56	+0.1
2,403,396	-		DDA3937_RS10670	0.56	+1.3
2,403,441	+		DDA3937_RS10670	0.61	+0.3
2,403,441	+		DDA3937_RS10670	0.61	+0.3
2,403,441	+		DDA3937_RS10670	0.61	-2.1
2,403,441	+		DDA3937_RS10670	0.61	-0.0
2,403,442	-		DDA3937_RS10670	0.61	-0.5
2,403,442	-		DDA3937_RS10670	0.61	-1.2
2,403,547	+		DDA3937_RS10670	0.73	+0.9
2,403,547	+		DDA3937_RS10670	0.73	-0.2
2,403,547	+		DDA3937_RS10670	0.73	+1.8
2,403,547	+		DDA3937_RS10670	0.73	-1.1
2,403,547	+		DDA3937_RS10670	0.73	+0.3
2,403,547	+		DDA3937_RS10670	0.73	-1.1
2,403,548	-		DDA3937_RS10670	0.73	-0.0
2,403,661	+		DDA3937_RS10670	0.85	+0.6
2,403,661	+		DDA3937_RS10670	0.85	-0.4
2,403,662	-		DDA3937_RS10670	0.85	+0.8
2,403,687	+		DDA3937_RS10670	0.88	+0.1
2,403,705	-				-1.4
2,403,708	+				+0.5
2,403,759	+				-0.7
2,403,759	+				+0.2
2,403,759	+				+1.1
2,403,759	+				+0.1
2,403,760	-				+0.6
2,403,760	-				-1.5
2,403,784	-				-0.6
2,403,813	+				-1.1
2,403,884	+				-0.2
2,403,884	+				+0.4
2,403,884	+				-0.7
2,404,410	-				-0.2
2,404,720	+		DDA3937_RS10675	0.66	-1.9
2,404,848	-		DDA3937_RS10675	0.77	-1.7
2,404,848	-		DDA3937_RS10675	0.77	-0.4
2,405,008	-				+1.6
2,405,010	-				-2.3
2,405,043	+				+0.4
2,405,092	-				-1.7
2,405,112	-				-0.0
2,405,135	-				-0.2
2,405,155	+				+1.3
2,405,155	+				-1.0
2,405,165	+				-0.6
2,405,165	+				-0.4
2,405,173	+				+0.8
2,405,173	+				-0.4
2,405,174	-				-0.2
2,405,246	-				-0.0
2,405,322	+				-0.4
2,405,329	+				-2.1
2,405,329	+				+1.7
2,405,330	-				-0.7
2,405,330	-				-2.2
2,405,370	+				-0.9
2,405,370	+				+0.1
2,405,388	+		DDA3937_RS10680	0.10	-1.7
2,405,388	+		DDA3937_RS10680	0.10	-0.7
2,405,419	-		DDA3937_RS10680	0.15	-0.4
2,405,419	-		DDA3937_RS10680	0.15	-0.9
2,405,419	-		DDA3937_RS10680	0.15	-1.8
2,405,421	+		DDA3937_RS10680	0.15	+1.1
2,405,421	+		DDA3937_RS10680	0.15	-0.1
2,405,421	+		DDA3937_RS10680	0.15	+0.3
2,405,421	+		DDA3937_RS10680	0.15	-0.3
2,405,421	+		DDA3937_RS10680	0.15	+0.8
2,405,421	+		DDA3937_RS10680	0.15	+0.1
2,405,421	+		DDA3937_RS10680	0.15	-0.4
2,405,421	+		DDA3937_RS10680	0.15	-0.3
2,405,422	-		DDA3937_RS10680	0.15	-1.2
2,405,422	-		DDA3937_RS10680	0.15	-0.4
2,405,422	-		DDA3937_RS10680	0.15	-0.7
2,405,422	-		DDA3937_RS10680	0.15	-0.6
2,405,426	+		DDA3937_RS10680	0.16	-1.4
2,405,428	+		DDA3937_RS10680	0.16	-1.2
2,405,428	+		DDA3937_RS10680	0.16	-1.5
2,405,429	-		DDA3937_RS10680	0.17	+0.5
2,405,436	+		DDA3937_RS10680	0.18	-0.3
2,405,473	+		DDA3937_RS10680	0.23	-1.7
2,405,522	+		DDA3937_RS10680	0.30	-1.1
2,405,522	+		DDA3937_RS10680	0.30	-1.3
2,405,588	+		DDA3937_RS10680	0.40	+0.6
2,405,589	-		DDA3937_RS10680	0.40	+1.8
2,405,610	+		DDA3937_RS10680	0.43	+0.7
2,405,635	+		DDA3937_RS10680	0.47	-1.1
2,405,668	+		DDA3937_RS10680	0.52	-0.5
2,405,668	+		DDA3937_RS10680	0.52	-0.7
2,405,668	+		DDA3937_RS10680	0.52	-0.5
2,405,669	-		DDA3937_RS10680	0.52	-0.8
2,405,669	-		DDA3937_RS10680	0.52	-0.7
2,405,669	-		DDA3937_RS10680	0.52	+0.0
2,405,694	-				+0.3
2,405,855	+		DDA3937_RS10680	0.80	+0.3
2,405,855	+		DDA3937_RS10680	0.80	+0.1
2,405,855	+		DDA3937_RS10680	0.80	-0.4
2,405,913	+		DDA3937_RS10680	0.89	-0.9
2,405,914	-		DDA3937_RS10680	0.89	+0.8
2,405,954	+				+0.2
2,405,954	+				+0.3
2,405,955	-				-0.4
2,405,974	+				-0.7
2,405,974	+				-1.2
2,405,987	+				-1.1
2,405,987	+				+0.3
2,405,988	-				+1.1
2,406,036	+				-0.5
2,406,067	-				-0.1
2,406,067	-				-1.3