Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10540

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,372,672	+				-1.3
2,372,774	-				+0.3
2,372,809	+				-0.4
2,372,809	+				-0.4
2,372,809	+				+0.6
2,372,809	+				-1.9
2,372,826	+				-0.2
2,372,827	-				+0.7
2,372,828	+				+0.1
2,372,828	+				-0.3
2,372,828	+				-0.3
2,372,829	-				-0.3
2,372,829	-				-0.9
2,372,860	+				+0.6
2,372,861	-				-1.0
2,372,895	+				-0.2
2,372,926	+				+0.5
2,372,926	+				-0.2
2,372,926	+				+0.5
2,372,927	-				-1.0
2,372,930	+				+0.2
2,372,931	-				-0.6
2,372,931	-				-0.4
2,372,931	-				-1.6
2,372,931	-				-0.3
2,372,996	-				-1.5
2,373,037	-				+0.3
2,373,048	+				+1.7
2,373,049	-				-0.6
2,373,071	+				+0.5
2,373,071	+				-2.7
2,373,071	+				+0.3
2,373,071	+				-0.1
2,373,071	+				-2.2
2,373,072	-				+0.3
2,373,091	+				-0.2
2,373,170	+				-0.7
2,373,170	+				-1.6
2,373,357	-		DDA3937_RS10540	0.27	-1.6
2,373,357	-		DDA3937_RS10540	0.27	+0.6
2,373,377	+		DDA3937_RS10540	0.29	-1.2
2,373,944	+		DDA3937_RS10540	0.87	-3.8
2,374,064	+				-0.4
2,374,065	-				-1.1
2,374,065	-				-0.4
2,374,065	-				+1.8
2,374,065	-				-0.6
2,374,065	-				+1.7
2,374,065	-				+0.3
2,374,065	-				-0.6
2,374,067	+				+2.1
2,374,135	-				-1.7
2,374,140	+				-0.2
2,374,141	-				+0.3
2,374,147	+				+0.8
2,374,182	+				-0.4
2,374,182	+				-0.2
2,374,183	-				-0.5
2,374,183	-				-0.3
2,374,184	+				-1.6
2,374,185	-				+0.3
2,374,185	-				+1.8
2,374,201	+				-2.3
2,374,242	+		DDA3937_RS10545	0.13	+0.0
2,374,242	+		DDA3937_RS10545	0.13	+0.3
2,374,243	-		DDA3937_RS10545	0.13	-1.2
2,374,243	-		DDA3937_RS10545	0.13	-1.2
2,374,244	+		DDA3937_RS10545	0.13	-1.3
2,374,301	+		DDA3937_RS10545	0.22	-0.7
2,374,302	-		DDA3937_RS10545	0.22	-0.4
2,374,302	-		DDA3937_RS10545	0.22	+0.5
2,374,377	+		DDA3937_RS10545	0.34	+1.3
2,374,378	-		DDA3937_RS10545	0.34	-1.3
2,374,378	-		DDA3937_RS10545	0.34	-1.9
2,374,378	-		DDA3937_RS10545	0.34	-2.2
2,374,572	+		DDA3937_RS10545	0.64	-0.4
2,374,574	+		DDA3937_RS10545	0.65	-1.1
2,374,574	+		DDA3937_RS10545	0.65	-0.3
2,374,574	+		DDA3937_RS10545	0.65	-1.7
2,374,575	-		DDA3937_RS10545	0.65	-0.2
2,374,575	-		DDA3937_RS10545	0.65	+0.8
2,374,575	-		DDA3937_RS10545	0.65	-0.6
2,374,575	-		DDA3937_RS10545	0.65	-0.5
2,374,592	-		DDA3937_RS10545	0.68	+1.0
2,374,800	+				-0.9
2,374,801	-				-0.5
2,374,881	+		DDA3937_RS10550	0.12	-0.9
2,374,881	+		DDA3937_RS10550	0.12	-1.3
2,374,882	-		DDA3937_RS10550	0.12	-1.3
2,374,882	-		DDA3937_RS10550	0.12	+0.6