Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10470

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,355,840	+		DDA3937_RS10465	0.19	-1.7
2,355,840	+		DDA3937_RS10465	0.19	+0.3
2,355,841	-		DDA3937_RS10465	0.19	-0.7
2,355,841	-		DDA3937_RS10465	0.19	-0.7
2,355,841	-		DDA3937_RS10465	0.19	-0.7
2,355,841	-		DDA3937_RS10465	0.19	-1.7
2,355,918	+		DDA3937_RS10465	0.25	-0.7
2,355,918	+		DDA3937_RS10465	0.25	-1.3
2,355,918	+		DDA3937_RS10465	0.25	-0.7
2,355,919	-		DDA3937_RS10465	0.25	-1.3
2,355,975	+		DDA3937_RS10465	0.30	-0.2
2,355,975	+				+0.3
2,355,975	+		DDA3937_RS10465	0.30	+0.3
2,355,976	-		DDA3937_RS10465	0.30	-2.7
2,355,976	-		DDA3937_RS10465	0.30	-0.2
2,356,131	-		DDA3937_RS10465	0.43	-0.7
2,356,174	+		DDA3937_RS10465	0.47	+1.3
2,356,174	+		DDA3937_RS10465	0.47	-1.7
2,356,175	-		DDA3937_RS10465	0.47	-2.3
2,356,269	+		DDA3937_RS10465	0.55	-1.7
2,356,270	-		DDA3937_RS10465	0.55	-2.6
2,356,413	+		DDA3937_RS10465	0.67	-0.7
2,356,413	+		DDA3937_RS10465	0.67	-0.7
2,356,413	+		DDA3937_RS10465	0.67	-1.7
2,356,414	-		DDA3937_RS10465	0.67	-1.7
2,356,414	-		DDA3937_RS10465	0.67	-1.9
2,356,414	-		DDA3937_RS10465	0.67	-1.3
2,356,414	-		DDA3937_RS10465	0.67	+0.3
2,356,414	-		DDA3937_RS10465	0.67	-0.7
2,356,414	-		DDA3937_RS10465	0.67	-2.3
2,356,504	+		DDA3937_RS10465	0.74	-0.7
2,356,505	-		DDA3937_RS10465	0.75	-2.3
2,356,505	-		DDA3937_RS10465	0.75	-3.1
2,356,590	+		DDA3937_RS10465	0.82	+0.3
2,356,591	-				+0.3
2,356,624	+		DDA3937_RS10465	0.85	-1.3
2,356,624	+		DDA3937_RS10465	0.85	+0.3
2,356,657	-		DDA3937_RS10465	0.87	+0.3
2,356,760	+				-1.7
2,356,761	-				-1.3
2,356,765	-				-0.7
2,356,765	-				+0.3
2,356,765	-				-0.7
2,356,765	-				-1.7
2,356,765	-				-1.7
2,356,765	-				-2.1
2,356,788	+				+0.3
2,356,789	-				-1.3
2,356,795	+				-0.7
2,356,795	+				+0.6
2,356,795	+				-1.3
2,356,795	+				-0.5
2,356,795	+				-1.3
2,356,796	-				-1.3
2,356,796	-				-1.3
2,356,796	-				+0.3
2,356,796	-				+0.3
2,356,800	-				-1.7
2,356,800	-				-0.7
2,356,800	-				-0.7
2,356,808	-				-1.3
2,356,808	-				-1.7
2,356,808	-				+0.3
2,356,808	-				-1.7
2,356,818	+				-0.7
2,356,818	+				+0.3
2,356,818	+				-1.3
2,356,818	+				-1.7
2,356,819	-				-0.7
2,356,819	-				+0.1
2,356,819	-				-0.7
2,356,819	-				-0.7
2,356,840	-				-0.7
2,357,209	+		DDA3937_RS10470	0.28	+0.3
2,357,278	+		DDA3937_RS10470	0.33	+0.3
2,357,288	+		DDA3937_RS10470	0.33	+0.3
2,357,289	-		DDA3937_RS10470	0.33	-0.7
2,357,289	-		DDA3937_RS10470	0.33	-1.3
2,357,289	-		DDA3937_RS10470	0.33	-1.3
2,357,293	+		DDA3937_RS10470	0.34	+0.4
2,357,293	+		DDA3937_RS10470	0.34	-0.7
2,357,293	+		DDA3937_RS10470	0.34	+0.8
2,357,294	-				+0.3
2,357,375	+		DDA3937_RS10470	0.40	+0.3
2,357,376	-		DDA3937_RS10470	0.40	+0.3
2,357,461	+		DDA3937_RS10470	0.46	-0.7
2,357,736	+		DDA3937_RS10470	0.66	+0.3
2,357,772	-		DDA3937_RS10470	0.68	-1.3
2,357,801	-		DDA3937_RS10470	0.70	-0.5
2,357,822	+		DDA3937_RS10470	0.72	+0.3
2,357,822	+				+0.3
2,357,823	-		DDA3937_RS10470	0.72	-3.4
2,357,825	+		DDA3937_RS10470	0.72	+0.3
2,357,837	+		DDA3937_RS10470	0.73	-1.3
2,357,838	-		DDA3937_RS10470	0.73	-1.1
2,357,838	-		DDA3937_RS10470	0.73	-2.9
2,357,838	-		DDA3937_RS10470	0.73	-2.1
2,357,838	-		DDA3937_RS10470	0.73	+0.3
2,357,838	-				-1.3
2,357,933	+		DDA3937_RS10470	0.80	-1.3
2,357,934	-		DDA3937_RS10470	0.80	+0.3
2,357,934	-		DDA3937_RS10470	0.80	-2.1
2,357,934	-		DDA3937_RS10470	0.80	+0.3
2,357,979	-		DDA3937_RS10470	0.83	-0.7
2,358,089	+				+0.3
2,358,089	+				-0.7
2,358,089	+				-0.3
2,358,089	+				-1.3
2,358,089	+				+0.3
2,358,090	-				-1.7
2,358,196	+				+0.3
2,358,196	+				-0.7
2,358,254	-				-1.3
2,358,327	+		DDA3937_RS10475	0.11	-2.9
2,358,327	+		DDA3937_RS10475	0.11	-0.9
2,358,328	-		DDA3937_RS10475	0.11	-2.2
2,358,339	+		DDA3937_RS10475	0.12	-1.7
2,358,339	+		DDA3937_RS10475	0.12	-0.7
2,358,340	-		DDA3937_RS10475	0.12	-0.7
2,358,340	-		DDA3937_RS10475	0.12	-3.4
2,358,405	-		DDA3937_RS10475	0.19	-2.7
2,358,451	+		DDA3937_RS10475	0.23	-1.7
2,358,451	+		DDA3937_RS10475	0.23	-1.6
2,358,451	+				-0.7
2,358,452	-		DDA3937_RS10475	0.23	-2.3
2,358,481	-		DDA3937_RS10475	0.26	-0.7
2,358,487	+		DDA3937_RS10475	0.27	+0.3
2,358,487	+		DDA3937_RS10475	0.27	-1.3
2,358,488	-		DDA3937_RS10475	0.27	-0.7
2,358,696	+		DDA3937_RS10475	0.48	+0.3
2,358,727	-		DDA3937_RS10475	0.51	-0.6
2,358,758	-		DDA3937_RS10475	0.54	-0.7
2,358,758	-		DDA3937_RS10475	0.54	-1.3
2,358,810	+		DDA3937_RS10475	0.59	+0.3
2,359,003	+		DDA3937_RS10475	0.78	-1.3
2,359,004	-		DDA3937_RS10475	0.79	-0.7
2,359,193	-				-1.3