Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10395

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,341,810	+				-0.7
2,341,810	+				-0.8
2,341,810	+				-0.9
2,341,810	+				-0.7
2,341,810	+				-0.8
2,341,810	+				-1.0
2,341,811	-				-1.4
2,341,811	-				-1.2
2,341,822	+				-0.9
2,341,822	+				-0.5
2,341,822	+				-1.3
2,341,822	+				-1.4
2,341,822	+				-2.2
2,341,822	+				-0.1
2,341,822	+				-0.4
2,341,822	+				-1.3
2,341,822	+				-0.7
2,341,822	+				-0.5
2,341,823	-				-0.2
2,341,823	-				-1.1
2,341,823	-				-0.6
2,341,823	-				-1.3
2,341,823	-				-0.1
2,341,823	-				-1.7
2,341,823	-				-0.9
2,341,855	+				-0.6
2,341,879	+				-0.5
2,341,879	+				-0.5
2,341,880	-				-0.7
2,341,915	+		DDA3937_RS10390	0.10	-0.4
2,341,915	+		DDA3937_RS10390	0.10	-0.7
2,341,916	-		DDA3937_RS10390	0.10	-0.7
2,341,916	-		DDA3937_RS10390	0.10	-0.6
2,341,916	-		DDA3937_RS10390	0.10	-0.3
2,341,916	-		DDA3937_RS10390	0.10	-1.0
2,341,916	-		DDA3937_RS10390	0.10	-0.9
2,341,972	+		DDA3937_RS10390	0.16	-0.8
2,341,972	+		DDA3937_RS10390	0.16	-0.5
2,341,973	-		DDA3937_RS10390	0.16	-0.9
2,342,083	+		DDA3937_RS10390	0.27	-1.6
2,342,147	+		DDA3937_RS10390	0.34	-1.1
2,342,147	+		DDA3937_RS10390	0.34	+0.1
2,342,147	+		DDA3937_RS10390	0.34	-0.8
2,342,147	+		DDA3937_RS10390	0.34	-1.1
2,342,147	+		DDA3937_RS10390	0.34	-0.6
2,342,147	+		DDA3937_RS10390	0.34	-0.8
2,342,147	+		DDA3937_RS10390	0.34	-0.9
2,342,147	+		DDA3937_RS10390	0.34	-0.7
2,342,147	+		DDA3937_RS10390	0.34	-0.4
2,342,148	-		DDA3937_RS10390	0.34	-0.5
2,342,148	-		DDA3937_RS10390	0.34	-0.2
2,342,148	-		DDA3937_RS10390	0.34	-0.6
2,342,272	+		DDA3937_RS10390	0.46	-0.6
2,342,272	+		DDA3937_RS10390	0.46	-1.5
2,342,272	+		DDA3937_RS10390	0.46	-0.4
2,342,272	+		DDA3937_RS10390	0.46	-3.4
2,342,272	+		DDA3937_RS10390	0.46	-0.8
2,342,273	-		DDA3937_RS10390	0.46	-1.0
2,342,273	-		DDA3937_RS10390	0.46	-0.6
2,342,283	-		DDA3937_RS10390	0.47	-1.0
2,342,283	-		DDA3937_RS10390	0.47	-1.1
2,342,283	-		DDA3937_RS10390	0.47	-1.0
2,342,350	+		DDA3937_RS10390	0.54	-0.6
2,342,351	-		DDA3937_RS10390	0.54	-1.1
2,342,455	+		DDA3937_RS10390	0.65	-1.3
2,342,455	+		DDA3937_RS10390	0.65	-0.4
2,342,455	+		DDA3937_RS10390	0.65	-0.7
2,342,455	+		DDA3937_RS10390	0.65	-0.5
2,342,455	+		DDA3937_RS10390	0.65	-0.6
2,342,456	-		DDA3937_RS10390	0.65	-0.8
2,342,456	-		DDA3937_RS10390	0.65	-0.9
2,342,458	+		DDA3937_RS10390	0.65	-0.7
2,342,458	+		DDA3937_RS10390	0.65	-0.3
2,342,458	+		DDA3937_RS10390	0.65	-1.2
2,342,458	+		DDA3937_RS10390	0.65	-1.1
2,342,458	+		DDA3937_RS10390	0.65	-0.6
2,342,458	+		DDA3937_RS10390	0.65	-0.2
2,342,458	+		DDA3937_RS10390	0.65	-0.6
2,342,459	-		DDA3937_RS10390	0.65	-0.6
2,342,459	-		DDA3937_RS10390	0.65	-1.1
2,342,459	-		DDA3937_RS10390	0.65	-1.6
2,342,459	-		DDA3937_RS10390	0.65	-1.1
2,342,459	-		DDA3937_RS10390	0.65	-1.0
2,342,459	-		DDA3937_RS10390	0.65	-1.5
2,342,464	+		DDA3937_RS10390	0.66	-0.8
2,342,464	+		DDA3937_RS10390	0.66	-0.5
2,342,464	+		DDA3937_RS10390	0.66	-1.8
2,342,465	-		DDA3937_RS10390	0.66	-1.1
2,342,465	-		DDA3937_RS10390	0.66	-0.8
2,342,465	-		DDA3937_RS10390	0.66	-0.8
2,342,516	+		DDA3937_RS10390	0.71	-1.0
2,342,517	-		DDA3937_RS10390	0.71	-1.7
2,342,517	-		DDA3937_RS10390	0.71	-0.8
2,342,517	-		DDA3937_RS10390	0.71	-0.3
2,342,517	-		DDA3937_RS10390	0.71	-0.6
2,342,517	-		DDA3937_RS10390	0.71	-0.7
2,342,517	-		DDA3937_RS10390	0.71	-1.0
2,342,528	-		DDA3937_RS10390	0.72	-1.2
2,342,537	+		DDA3937_RS10390	0.73	+0.2
2,342,538	-		DDA3937_RS10390	0.73	-1.3
2,342,579	+		DDA3937_RS10390	0.77	-0.8
2,342,580	-		DDA3937_RS10390	0.77	-0.9
2,342,580	-		DDA3937_RS10390	0.77	-0.6
2,342,641	+		DDA3937_RS10390	0.84	-1.0
2,342,641	+		DDA3937_RS10390	0.84	-0.3
2,342,642	-		DDA3937_RS10390	0.84	-1.1
2,342,642	-		DDA3937_RS10390	0.84	-0.1
2,342,708	+				-0.9
2,342,708	+				-0.9
2,342,709	-				-1.0
2,342,796	+				-0.8
2,342,796	+				-0.7
2,342,796	+				-0.1
2,342,796	+				-0.1
2,342,796	+				-0.6
2,342,796	+				-1.1
2,342,796	+				-0.6
2,342,797	-				-0.2
2,342,797	-				-0.7
2,342,797	-				-1.1
2,342,797	-				-1.0
2,342,797	-				-1.0
2,342,799	+				-0.6
2,342,800	-				-0.9
2,342,800	-				-0.8
2,342,800	-				+1.4
2,342,800	-				-0.6
2,342,825	+				-0.7
2,342,825	+				-0.5
2,342,826	-				+0.6
2,342,874	+				-0.2
2,342,874	+				-1.0
2,342,874	+				-1.2
2,342,874	+				-0.7
2,342,875	-				-1.1
2,342,875	-				-1.3
2,342,875	-				-2.1
2,342,875	-				-0.6
2,342,938	+		DDA3937_RS10395	0.14	-0.2
2,342,938	+		DDA3937_RS10395	0.14	-0.5
2,342,938	+		DDA3937_RS10395	0.14	-0.8
2,342,939	-		DDA3937_RS10395	0.14	-1.1
2,342,939	-		DDA3937_RS10395	0.14	-1.2
2,342,939	-		DDA3937_RS10395	0.14	-1.1
2,343,036	+		DDA3937_RS10395	0.23	-0.9
2,343,036	+		DDA3937_RS10395	0.23	-0.9
2,343,036	+		DDA3937_RS10395	0.23	-1.3
2,343,037	-		DDA3937_RS10395	0.24	-0.6
2,343,037	-		DDA3937_RS10395	0.24	-0.8
2,343,039	+		DDA3937_RS10395	0.24	-0.3
2,343,039	+		DDA3937_RS10395	0.24	-0.6
2,343,039	+		DDA3937_RS10395	0.24	-0.7
2,343,040	-		DDA3937_RS10395	0.24	-0.4
2,343,040	-		DDA3937_RS10395	0.24	-0.6
2,343,040	-		DDA3937_RS10395	0.24	-0.6
2,343,040	-		DDA3937_RS10395	0.24	-1.0
2,343,040	-		DDA3937_RS10395	0.24	-0.2
2,343,040	-		DDA3937_RS10395	0.24	-0.9
2,343,040	-		DDA3937_RS10395	0.24	-0.9
2,343,040	-		DDA3937_RS10395	0.24	-1.0
2,343,092	+		DDA3937_RS10395	0.29	-0.4
2,343,092	+		DDA3937_RS10395	0.29	-0.3
2,343,092	+		DDA3937_RS10395	0.29	-0.6
2,343,092	+		DDA3937_RS10395	0.29	-0.3
2,343,092	+		DDA3937_RS10395	0.29	+0.3
2,343,092	+		DDA3937_RS10395	0.29	-0.1
2,343,092	+		DDA3937_RS10395	0.29	-0.7
2,343,092	+		DDA3937_RS10395	0.29	-1.0
2,343,092	+		DDA3937_RS10395	0.29	-0.8
2,343,093	-		DDA3937_RS10395	0.29	-1.3
2,343,093	-		DDA3937_RS10395	0.29	-1.3
2,343,093	-		DDA3937_RS10395	0.29	-1.2
2,343,093	-		DDA3937_RS10395	0.29	-1.1
2,343,093	-		DDA3937_RS10395	0.29	-0.9
2,343,165	+		DDA3937_RS10395	0.36	-0.6
2,343,183	+		DDA3937_RS10395	0.38	-0.7
2,343,183	+		DDA3937_RS10395	0.38	-0.1
2,343,183	+		DDA3937_RS10395	0.38	-0.6
2,343,183	+		DDA3937_RS10395	0.38	-0.8
2,343,183	+		DDA3937_RS10395	0.38	-1.2
2,343,184	-		DDA3937_RS10395	0.38	-0.9
2,343,184	-		DDA3937_RS10395	0.38	-1.1
2,343,184	-		DDA3937_RS10395	0.38	-2.6
2,343,187	+		DDA3937_RS10395	0.39	-0.7
2,343,187	+		DDA3937_RS10395	0.39	-1.2
2,343,187	+		DDA3937_RS10395	0.39	-0.7
2,343,187	+		DDA3937_RS10395	0.39	-0.7
2,343,187	+		DDA3937_RS10395	0.39	+0.1
2,343,187	+		DDA3937_RS10395	0.39	-0.5
2,343,187	+		DDA3937_RS10395	0.39	-0.1
2,343,188	-		DDA3937_RS10395	0.39	-0.6
2,343,188	-		DDA3937_RS10395	0.39	-0.7
2,343,278	-		DDA3937_RS10395	0.48	-1.6
2,343,312	+		DDA3937_RS10395	0.51	-0.6
2,343,425	+		DDA3937_RS10395	0.62	-1.1
2,343,425	+		DDA3937_RS10395	0.62	-0.8
2,343,425	+		DDA3937_RS10395	0.62	-0.6
2,343,425	+		DDA3937_RS10395	0.62	-0.9
2,343,426	-		DDA3937_RS10395	0.62	-0.5
2,343,426	-		DDA3937_RS10395	0.62	-0.3
2,343,426	-		DDA3937_RS10395	0.62	-0.9
2,343,426	-		DDA3937_RS10395	0.62	-0.9
2,343,426	-		DDA3937_RS10395	0.62	-0.7
2,343,426	-		DDA3937_RS10395	0.62	-0.5
2,343,426	-		DDA3937_RS10395	0.62	-0.8
2,343,511	+		DDA3937_RS10395	0.71	-0.5
2,343,511	+		DDA3937_RS10395	0.71	-0.4
2,343,511	+		DDA3937_RS10395	0.71	+0.8
2,343,511	+		DDA3937_RS10395	0.71	-0.8
2,343,511	+		DDA3937_RS10395	0.71	-0.5
2,343,511	+		DDA3937_RS10395	0.71	-0.7
2,343,511	+		DDA3937_RS10395	0.71	-0.2
2,343,511	+		DDA3937_RS10395	0.71	-1.1
2,343,511	+		DDA3937_RS10395	0.71	-1.4
2,343,511	+		DDA3937_RS10395	0.71	-0.8
2,343,511	+		DDA3937_RS10395	0.71	-0.2
2,343,511	+		DDA3937_RS10395	0.71	-0.6
2,343,511	+		DDA3937_RS10395	0.71	-0.1
2,343,512	-		DDA3937_RS10395	0.71	-1.5
2,343,512	-		DDA3937_RS10395	0.71	-1.2
2,343,512	-		DDA3937_RS10395	0.71	-0.8
2,343,512	-		DDA3937_RS10395	0.71	-1.0
2,343,512	-		DDA3937_RS10395	0.71	-0.0
2,343,512	-		DDA3937_RS10395	0.71	-0.7
2,343,512	-		DDA3937_RS10395	0.71	-0.7
2,343,512	-		DDA3937_RS10395	0.71	-0.0
2,343,512	-		DDA3937_RS10395	0.71	-0.5
2,343,512	-		DDA3937_RS10395	0.71	-0.5
2,343,512	-		DDA3937_RS10395	0.71	-0.6
2,343,512	-		DDA3937_RS10395	0.71	-1.1
2,343,512	-		DDA3937_RS10395	0.71	-0.8
2,343,512	-		DDA3937_RS10395	0.71	-1.0
2,343,512	-		DDA3937_RS10395	0.71	-0.3
2,343,512	-		DDA3937_RS10395	0.71	-1.3
2,343,512	-		DDA3937_RS10395	0.71	-0.7
2,343,541	+		DDA3937_RS10395	0.74	-0.6
2,343,541	+		DDA3937_RS10395	0.74	-0.7
2,343,541	+		DDA3937_RS10395	0.74	-0.2
2,343,541	+		DDA3937_RS10395	0.74	-0.9
2,343,541	+		DDA3937_RS10395	0.74	-0.9
2,343,541	+		DDA3937_RS10395	0.74	-0.8
2,343,541	+		DDA3937_RS10395	0.74	-0.3
2,343,542	-		DDA3937_RS10395	0.74	-2.3
2,343,542	-		DDA3937_RS10395	0.74	-0.7
2,343,542	-		DDA3937_RS10395	0.74	+0.1
2,343,542	-		DDA3937_RS10395	0.74	-0.8
2,343,553	+		DDA3937_RS10395	0.75	-0.8
2,343,553	+		DDA3937_RS10395	0.75	-0.6
2,343,553	+		DDA3937_RS10395	0.75	-1.0
2,343,554	-		DDA3937_RS10395	0.75	-0.9
2,343,554	-		DDA3937_RS10395	0.75	-1.0
2,343,554	-		DDA3937_RS10395	0.75	-1.7
2,343,554	-		DDA3937_RS10395	0.75	-0.9
2,343,574	+		DDA3937_RS10395	0.77	-0.5
2,343,574	+		DDA3937_RS10395	0.77	-0.3
2,343,575	-		DDA3937_RS10395	0.77	+0.2
2,343,575	-		DDA3937_RS10395	0.77	-0.9
2,343,575	-		DDA3937_RS10395	0.77	-1.3
2,343,576	+		DDA3937_RS10395	0.77	-0.3
2,343,576	+		DDA3937_RS10395	0.77	-0.7
2,343,576	+		DDA3937_RS10395	0.77	-0.7
2,343,576	+		DDA3937_RS10395	0.77	-0.3
2,343,577	-		DDA3937_RS10395	0.77	-2.1
2,343,577	-		DDA3937_RS10395	0.77	-1.5
2,343,577	-		DDA3937_RS10395	0.77	-0.6
2,343,577	-		DDA3937_RS10395	0.77	-1.0
2,343,627	+		DDA3937_RS10395	0.82	-0.5
2,343,627	+		DDA3937_RS10395	0.82	-1.7
2,343,627	+		DDA3937_RS10395	0.82	-0.4
2,343,627	+		DDA3937_RS10395	0.82	-0.4
2,343,628	-		DDA3937_RS10395	0.82	-0.4
2,343,628	-		DDA3937_RS10395	0.82	-0.7
2,343,628	-		DDA3937_RS10395	0.82	-1.1
2,343,628	-		DDA3937_RS10395	0.82	+0.4
2,343,628	-		DDA3937_RS10395	0.82	-1.0
2,343,692	+		DDA3937_RS10395	0.89	-0.5
2,343,692	+		DDA3937_RS10395	0.89	-0.4
2,343,692	+		DDA3937_RS10395	0.89	-0.5
2,343,692	+		DDA3937_RS10395	0.89	-0.7
2,343,692	+		DDA3937_RS10395	0.89	-0.3
2,343,692	+		DDA3937_RS10395	0.89	-0.5
2,343,693	-		DDA3937_RS10395	0.89	+0.1
2,343,693	-		DDA3937_RS10395	0.89	-1.0
2,343,693	-		DDA3937_RS10395	0.89	-0.8
2,343,693	-		DDA3937_RS10395	0.89	-0.4
2,343,693	-		DDA3937_RS10395	0.89	-0.6
2,343,693	-		DDA3937_RS10395	0.89	-0.6
2,343,693	-		DDA3937_RS10395	0.89	-0.2
2,343,821	+				-0.3
2,343,821	+				-0.0
2,343,822	-				+0.3
2,343,835	+				-0.3
2,343,869	+				+1.3
2,343,892	-				+0.1
2,343,979	-		DDA3937_RS10400	0.21	-0.1
2,343,979	-		DDA3937_RS10400	0.21	-1.1
2,344,021	+		DDA3937_RS10400	0.34	+0.1
2,344,021	+		DDA3937_RS10400	0.34	-0.4
2,344,137	+		DDA3937_RS10400	0.70	-0.2
2,344,138	-		DDA3937_RS10400	0.70	+0.1
2,344,185	-		DDA3937_RS10400	0.85	-0.5
2,344,185	-		DDA3937_RS10400	0.85	+0.5
2,344,185	-		DDA3937_RS10400	0.85	+0.5
2,344,226	-				+0.7
2,344,226	-				-1.1
2,344,233	+				+0.1
2,344,234	-				+0.3
2,344,234	-				-0.2
2,344,266	+				+0.0
2,344,266	+				+0.6
2,344,267	-				+0.9
2,344,267	-				-0.2
2,344,267	-				-1.8
2,344,267	-				+0.7
2,344,267	-				+0.6