Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10375

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,337,250	+		DDA3937_RS10370	0.85	-0.8
2,337,251	-				+0.3
2,337,342	+				-1.2
2,337,343	-				-0.2
2,337,345	-				-1.3
2,337,371	+				-0.7
2,337,389	-				+0.1
2,337,427	+				+0.3
2,337,427	+				-0.2
2,337,434	+				-0.2
2,337,440	+				+0.4
2,337,440	+				-0.6
2,337,441	-				+0.8
2,337,445	-				+1.3
2,337,445	-				+1.3
2,337,492	+				-0.4
2,337,493	-				-0.6
2,337,496	+				-0.7
2,337,501	+				-0.2
2,337,502	-				-0.6
2,337,502	-				+0.5
2,337,508	+				-1.5
2,337,508	+				-0.5
2,337,546	+				-0.1
2,337,547	-				-0.9
2,337,547	-				-1.3
2,337,568	-				-2.1
2,337,648	+		DDA3937_RS23165	0.31	-0.3
2,337,649	-		DDA3937_RS23165	0.31	-0.1
2,337,654	+		DDA3937_RS23165	0.32	+0.5
2,337,655	-		DDA3937_RS23165	0.33	+1.3
2,337,666	-		DDA3937_RS23165	0.35	-0.9
2,337,670	-		DDA3937_RS23165	0.37	+0.3
2,337,670	-		DDA3937_RS23165	0.37	-1.3
2,337,736	+		DDA3937_RS23165	0.54	-1.6
2,337,746	+		DDA3937_RS23165	0.57	-1.3
2,337,746	+		DDA3937_RS23165	0.57	-2.6
2,337,754	+		DDA3937_RS23165	0.59	-2.2
2,337,796	+		DDA3937_RS23165	0.70	-1.4
2,337,797	-		DDA3937_RS23165	0.70	-0.7
2,337,838	+		DDA3937_RS23165	0.81	-0.3
2,337,838	+		DDA3937_RS23165	0.81	+0.0
2,337,838	+		DDA3937_RS23165	0.81	-0.1
2,337,839	-		DDA3937_RS23165	0.82	-1.9
2,337,839	-		DDA3937_RS23165	0.82	-0.6
2,337,839	-		DDA3937_RS23165	0.82	-0.5
2,337,856	-		DDA3937_RS23165	0.86	-0.9
2,337,856	-		DDA3937_RS23165	0.86	-0.6
2,337,856	-		DDA3937_RS23165	0.86	-1.0
2,337,877	+				-0.5
2,337,877	+				-0.7
2,337,877	+				-0.6
2,337,878	-				-0.3
2,337,878	-				-0.6
2,337,878	-				-1.2
2,337,878	-				-0.8
2,337,878	-				-0.1
2,337,882	+				-0.2
2,337,883	-				-1.1
2,337,883	-				-0.5
2,337,883	-				-0.6
2,337,883	-				-0.8
2,337,883	-				-0.5
2,337,883	-				-0.6
2,337,929	+				-0.9
2,337,930	-				-1.2
2,337,930	-				-1.6
2,337,982	+				-0.7
2,337,982	+				+0.0
2,338,056	-				-0.4
2,338,056	-				-0.6
2,338,062	+				-2.3
2,338,063	-				-0.9
2,338,063	-				-0.5
2,338,063	-				-0.7
2,338,084	-				-1.0
2,338,084	-				+0.4
2,338,084	-				+0.3
2,338,093	+				-0.7
2,338,093	+				-0.7
2,338,094	-				-0.9
2,338,094	-				-0.2
2,338,094	-				-1.2
2,338,094	-				-0.7
2,338,094	-				-1.7
2,338,094	-				-0.5
2,338,160	+				-0.9
2,338,160	+				-0.5
2,338,161	-				-0.8
2,338,161	-				-0.8
2,338,161	-				-2.3
2,338,165	-				-0.6
2,338,174	+				-0.5
2,338,200	-				-0.4
2,338,200	-				-0.6
2,338,200	-				-0.6
2,338,200	-				-1.4
2,338,200	-				-1.0
2,338,200	-				-0.2
2,338,200	-				-1.1
2,338,215	+				-1.0
2,338,215	+				-0.6
2,338,215	+				-0.9
2,338,215	+				-0.8
2,338,215	+				-0.6
2,338,215	+				-0.3
2,338,215	+				-1.1
2,338,216	-				-0.7
2,338,216	-				-1.2
2,338,216	-				-0.3
2,338,216	-				-0.6
2,338,216	-				-0.8
2,338,219	+				-1.4
2,338,219	+				-0.8
2,338,219	+				+0.1
2,338,219	+				-0.3
2,338,220	-				-1.3
2,338,225	+				-1.0
2,338,225	+				-0.6
2,338,225	+				-0.7
2,338,239	-				-0.7
2,338,239	-				-1.2
2,338,271	+				-0.7
2,338,271	+				-0.7
2,338,271	+				-0.1
2,338,271	+				-0.1
2,338,271	+				-0.2
2,338,272	-				-0.8
2,338,272	-				-0.7
2,338,272	-				-1.2
2,338,272	-				-0.9
2,338,391	+		DDA3937_RS10375	0.10	-0.5
2,338,391	+		DDA3937_RS10375	0.10	-0.7
2,338,392	-		DDA3937_RS10375	0.10	-1.5
2,338,392	-		DDA3937_RS10375	0.10	-1.9
2,338,392	-		DDA3937_RS10375	0.10	-0.7
2,338,392	-		DDA3937_RS10375	0.10	-0.6
2,338,451	+		DDA3937_RS10375	0.14	-0.7
2,338,452	-		DDA3937_RS10375	0.14	-1.3
2,338,502	+		DDA3937_RS10375	0.17	-0.7
2,338,502	+		DDA3937_RS10375	0.17	-0.8
2,338,503	-		DDA3937_RS10375	0.17	-0.2
2,338,503	-		DDA3937_RS10375	0.17	-1.2
2,338,535	+		DDA3937_RS10375	0.19	-0.5
2,338,535	+		DDA3937_RS10375	0.19	-0.5
2,338,629	+		DDA3937_RS10375	0.25	-1.1
2,338,638	+		DDA3937_RS10375	0.25	-0.2
2,338,638	+		DDA3937_RS10375	0.25	-0.6
2,338,638	+		DDA3937_RS10375	0.25	-0.7
2,338,639	-		DDA3937_RS10375	0.25	-0.7
2,338,639	-		DDA3937_RS10375	0.25	-0.6
2,338,639	-		DDA3937_RS10375	0.25	-0.8
2,338,655	+		DDA3937_RS10375	0.26	-0.5
2,338,655	+		DDA3937_RS10375	0.26	+0.1
2,338,655	+		DDA3937_RS10375	0.26	-0.3
2,338,764	+		DDA3937_RS10375	0.33	-0.7
2,338,764	+		DDA3937_RS10375	0.33	-0.9
2,338,764	+		DDA3937_RS10375	0.33	-0.6
2,338,764	+		DDA3937_RS10375	0.33	-0.5
2,338,764	+		DDA3937_RS10375	0.33	-0.5
2,338,765	-		DDA3937_RS10375	0.33	+0.0
2,338,765	-		DDA3937_RS10375	0.33	-1.5
2,338,765	-		DDA3937_RS10375	0.33	-1.1
2,338,765	-		DDA3937_RS10375	0.33	-1.6
2,338,765	-		DDA3937_RS10375	0.33	-0.8
2,338,765	-		DDA3937_RS10375	0.33	-0.9
2,338,765	-		DDA3937_RS10375	0.33	-0.2
2,338,770	+		DDA3937_RS10375	0.33	-0.5
2,338,770	+		DDA3937_RS10375	0.33	-0.4
2,338,770	+		DDA3937_RS10375	0.33	-0.5
2,338,771	-		DDA3937_RS10375	0.33	-1.2
2,338,771	-		DDA3937_RS10375	0.33	-1.3
2,338,771	-		DDA3937_RS10375	0.33	-1.9
2,338,771	-		DDA3937_RS10375	0.33	-2.9
2,338,771	-		DDA3937_RS10375	0.33	-1.3
2,338,771	-		DDA3937_RS10375	0.33	-0.3
2,338,772	+		DDA3937_RS10375	0.34	-0.5
2,338,772	+		DDA3937_RS10375	0.34	-0.5
2,338,773	-		DDA3937_RS10375	0.34	-1.2
2,338,773	-		DDA3937_RS10375	0.34	-0.9
2,338,854	-		DDA3937_RS10375	0.39	-1.0
2,338,875	+		DDA3937_RS10375	0.40	-1.3
2,338,875	+		DDA3937_RS10375	0.40	-0.6
2,338,932	+		DDA3937_RS10375	0.43	-0.3
2,338,932	+		DDA3937_RS10375	0.43	-0.8
2,338,932	+		DDA3937_RS10375	0.43	-0.5
2,338,932	+		DDA3937_RS10375	0.43	-0.8
2,338,932	+		DDA3937_RS10375	0.43	-0.6
2,338,933	-		DDA3937_RS10375	0.43	-1.2
2,338,933	-		DDA3937_RS10375	0.43	-0.5
2,338,933	-		DDA3937_RS10375	0.43	-0.9
2,338,961	+		DDA3937_RS10375	0.45	-1.3
2,338,962	-		DDA3937_RS10375	0.45	-1.5
2,338,962	-		DDA3937_RS10375	0.45	-0.7
2,338,971	+		DDA3937_RS10375	0.46	-0.2
2,338,971	+		DDA3937_RS10375	0.46	-0.1
2,338,971	+		DDA3937_RS10375	0.46	-0.0
2,338,971	+		DDA3937_RS10375	0.46	-0.5
2,338,971	+		DDA3937_RS10375	0.46	-0.9
2,338,972	-		DDA3937_RS10375	0.46	-0.8
2,338,972	-		DDA3937_RS10375	0.46	-1.5
2,338,972	-		DDA3937_RS10375	0.46	-1.2
2,338,972	-		DDA3937_RS10375	0.46	-1.0
2,338,972	-		DDA3937_RS10375	0.46	-1.1
2,338,972	-		DDA3937_RS10375	0.46	-2.2
2,338,972	-		DDA3937_RS10375	0.46	-0.4
2,339,037	+		DDA3937_RS10375	0.50	-0.8
2,339,037	+		DDA3937_RS10375	0.50	-0.7
2,339,037	+		DDA3937_RS10375	0.50	-0.9
2,339,037	+		DDA3937_RS10375	0.50	-1.2
2,339,037	+		DDA3937_RS10375	0.50	-0.6
2,339,037	+		DDA3937_RS10375	0.50	+0.0
2,339,037	+		DDA3937_RS10375	0.50	-0.9
2,339,037	+		DDA3937_RS10375	0.50	-0.3
2,339,037	+		DDA3937_RS10375	0.50	-0.3
2,339,037	+		DDA3937_RS10375	0.50	-0.8
2,339,037	+		DDA3937_RS10375	0.50	-0.7
2,339,037	+		DDA3937_RS10375	0.50	-0.7
2,339,037	+		DDA3937_RS10375	0.50	-0.6
2,339,037	+		DDA3937_RS10375	0.50	-0.9
2,339,037	+		DDA3937_RS10375	0.50	-0.7
2,339,037	+		DDA3937_RS10375	0.50	-1.2
2,339,037	+				+1.6
2,339,038	-		DDA3937_RS10375	0.50	-1.2
2,339,038	-		DDA3937_RS10375	0.50	-0.5
2,339,038	-		DDA3937_RS10375	0.50	-0.9
2,339,038	-		DDA3937_RS10375	0.50	-0.9
2,339,038	-		DDA3937_RS10375	0.50	-0.3
2,339,038	-		DDA3937_RS10375	0.50	-0.4
2,339,038	-		DDA3937_RS10375	0.50	-2.1
2,339,038	-		DDA3937_RS10375	0.50	-1.3
2,339,038	-		DDA3937_RS10375	0.50	-1.0
2,339,038	-		DDA3937_RS10375	0.50	-0.1
2,339,038	-		DDA3937_RS10375	0.50	-1.0
2,339,038	-		DDA3937_RS10375	0.50	-1.0
2,339,038	-		DDA3937_RS10375	0.50	-1.0
2,339,038	-		DDA3937_RS10375	0.50	-1.2
2,339,038	-		DDA3937_RS10375	0.50	-1.2
2,339,038	-		DDA3937_RS10375	0.50	-0.7
2,339,038	-		DDA3937_RS10375	0.50	-0.0
2,339,039	+		DDA3937_RS10375	0.50	-0.9
2,339,039	+		DDA3937_RS10375	0.50	-0.1
2,339,040	-		DDA3937_RS10375	0.50	-1.0
2,339,040	-		DDA3937_RS10375	0.50	-1.3
2,339,040	-		DDA3937_RS10375	0.50	-0.7
2,339,040	-		DDA3937_RS10375	0.50	-1.6
2,339,040	-		DDA3937_RS10375	0.50	-0.9
2,339,109	+		DDA3937_RS10375	0.54	-0.4
2,339,109	+		DDA3937_RS10375	0.54	-0.4
2,339,109	+		DDA3937_RS10375	0.54	+0.3
2,339,109	+		DDA3937_RS10375	0.54	-0.0
2,339,121	+		DDA3937_RS10375	0.55	-1.1
2,339,121	+		DDA3937_RS10375	0.55	+0.0
2,339,121	+		DDA3937_RS10375	0.55	-1.2
2,339,121	+		DDA3937_RS10375	0.55	-0.5
2,339,121	+		DDA3937_RS10375	0.55	-0.5
2,339,121	+		DDA3937_RS10375	0.55	-0.7
2,339,121	+		DDA3937_RS10375	0.55	-0.5
2,339,121	+		DDA3937_RS10375	0.55	-1.2
2,339,121	+		DDA3937_RS10375	0.55	-0.6
2,339,121	+		DDA3937_RS10375	0.55	-1.1
2,339,121	+		DDA3937_RS10375	0.55	-0.7
2,339,122	-		DDA3937_RS10375	0.55	-0.8
2,339,122	-		DDA3937_RS10375	0.55	-0.5
2,339,122	-		DDA3937_RS10375	0.55	-0.8
2,339,122	-		DDA3937_RS10375	0.55	-0.9
2,339,122	-		DDA3937_RS10375	0.55	-1.1
2,339,122	-		DDA3937_RS10375	0.55	-1.4
2,339,122	-		DDA3937_RS10375	0.55	-1.1
2,339,122	-		DDA3937_RS10375	0.55	-1.2
2,339,122	-		DDA3937_RS10375	0.55	-0.4
2,339,122	-		DDA3937_RS10375	0.55	-1.1
2,339,124	+		DDA3937_RS10375	0.55	-0.8
2,339,124	+		DDA3937_RS10375	0.55	-0.7
2,339,124	+		DDA3937_RS10375	0.55	-0.6
2,339,124	+		DDA3937_RS10375	0.55	-0.2
2,339,125	-		DDA3937_RS10375	0.55	-0.6
2,339,125	-		DDA3937_RS10375	0.55	-1.3
2,339,125	-		DDA3937_RS10375	0.55	-1.2
2,339,125	-		DDA3937_RS10375	0.55	+0.4
2,339,125	-		DDA3937_RS10375	0.55	-0.7
2,339,125	-		DDA3937_RS10375	0.55	-0.6
2,339,125	-		DDA3937_RS10375	0.55	-0.4
2,339,125	-		DDA3937_RS10375	0.55	-0.6
2,339,125	-		DDA3937_RS10375	0.55	-0.9
2,339,125	-		DDA3937_RS10375	0.55	-0.6
2,339,125	-		DDA3937_RS10375	0.55	-0.9
2,339,125	-		DDA3937_RS10375	0.55	-0.9
2,339,125	-		DDA3937_RS10375	0.55	-0.6
2,339,127	+		DDA3937_RS10375	0.55	-0.9
2,339,127	+		DDA3937_RS10375	0.55	-0.7
2,339,127	+		DDA3937_RS10375	0.55	-0.6
2,339,127	+		DDA3937_RS10375	0.55	-0.8
2,339,127	+		DDA3937_RS10375	0.55	-1.1
2,339,127	+		DDA3937_RS10375	0.55	-0.4
2,339,127	+		DDA3937_RS10375	0.55	-0.6
2,339,127	+		DDA3937_RS10375	0.55	-0.2
2,339,127	+		DDA3937_RS10375	0.55	+0.3
2,339,128	-		DDA3937_RS10375	0.55	-1.0
2,339,128	-		DDA3937_RS10375	0.55	-1.1
2,339,128	-		DDA3937_RS10375	0.55	-0.6
2,339,128	-		DDA3937_RS10375	0.55	-0.7
2,339,128	-		DDA3937_RS10375	0.55	-0.4
2,339,128	-		DDA3937_RS10375	0.55	-0.9
2,339,128	-		DDA3937_RS10375	0.55	-0.7
2,339,186	-		DDA3937_RS10375	0.59	-0.3
2,339,186	-		DDA3937_RS10375	0.59	-1.0
2,339,265	+		DDA3937_RS10375	0.64	-0.3
2,339,265	+		DDA3937_RS10375	0.64	-0.7
2,339,265	+		DDA3937_RS10375	0.64	-0.5
2,339,266	-		DDA3937_RS10375	0.64	-0.8
2,339,266	-		DDA3937_RS10375	0.64	-0.9
2,339,266	-		DDA3937_RS10375	0.64	-0.9
2,339,330	+		DDA3937_RS10375	0.67	-0.9
2,339,331	-		DDA3937_RS10375	0.68	-1.0
2,339,331	-		DDA3937_RS10375	0.68	-1.6
2,339,403	+		DDA3937_RS10375	0.72	-0.5
2,339,403	+		DDA3937_RS10375	0.72	-0.6
2,339,403	+		DDA3937_RS10375	0.72	-0.7
2,339,404	-		DDA3937_RS10375	0.72	-0.5
2,339,404	-		DDA3937_RS10375	0.72	-1.0
2,339,404	-		DDA3937_RS10375	0.72	-0.0
2,339,404	-		DDA3937_RS10375	0.72	-0.8
2,339,404	-		DDA3937_RS10375	0.72	-1.0
2,339,404	-		DDA3937_RS10375	0.72	-0.1
2,339,468	-		DDA3937_RS10375	0.76	-1.0
2,339,568	+		DDA3937_RS10375	0.82	-0.5
2,339,568	+		DDA3937_RS10375	0.82	-0.5
2,339,568	+		DDA3937_RS10375	0.82	-0.4
2,339,568	+		DDA3937_RS10375	0.82	-0.0
2,339,568	+		DDA3937_RS10375	0.82	-0.5
2,339,568	+		DDA3937_RS10375	0.82	-1.3
2,339,568	+		DDA3937_RS10375	0.82	-1.1
2,339,569	-		DDA3937_RS10375	0.82	-2.3
2,339,569	-		DDA3937_RS10375	0.82	-0.3
2,339,569	-		DDA3937_RS10375	0.82	-0.6
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