Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10300

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,320,918	+				-1.5
2,320,962	-				+0.1
2,321,124	+				+2.3
2,321,124	+				-1.1
2,321,125	-				-0.8
2,321,135	+				-0.2
2,321,136	-				+0.6
2,321,136	-				-0.3
2,321,139	+				-1.0
2,321,140	-				-1.3
2,321,140	-				-0.7
2,321,188	+				+0.4
2,321,221	-				+0.8
2,321,343	-		DDA3937_RS10295	0.15	-0.3
2,321,343	-		DDA3937_RS10295	0.15	-1.1
2,321,343	-		DDA3937_RS10295	0.15	-0.7
2,321,406	-		DDA3937_RS10295	0.27	+0.7
2,321,646	-		DDA3937_RS10295	0.70	-2.1
2,321,737	+		DDA3937_RS10295	0.87	+0.3
2,321,737	+		DDA3937_RS10295	0.87	-1.3
2,321,738	-		DDA3937_RS10295	0.87	-0.4
2,321,738	-		DDA3937_RS10295	0.87	+0.9
2,321,753	+		DDA3937_RS10295	0.89	-2.2
2,321,802	+				-0.9
2,321,802	+				-0.3
2,321,802	+				-1.7
2,321,802	+				+0.1
2,321,803	-				-0.1
2,321,809	-				-1.6
2,322,054	+				-0.5
2,322,224	-		DDA3937_RS10300	0.17	-0.5
2,322,246	+		DDA3937_RS10300	0.18	-0.4
2,322,246	+		DDA3937_RS10300	0.18	+0.1
2,322,247	-				+0.8
2,322,247	-		DDA3937_RS10300	0.18	-0.7
2,322,247	-		DDA3937_RS10300	0.18	-1.7
2,322,408	+		DDA3937_RS10300	0.27	+1.3
2,322,408	+		DDA3937_RS10300	0.27	-1.5
2,322,408	+		DDA3937_RS10300	0.27	-0.7
2,322,408	+		DDA3937_RS10300	0.27	-2.3
2,322,409	-		DDA3937_RS10300	0.27	-0.2
2,322,432	+		DDA3937_RS10300	0.28	-0.4
2,322,433	-		DDA3937_RS10300	0.28	-1.2
2,322,433	-		DDA3937_RS10300	0.28	-0.9
2,322,434	+		DDA3937_RS10300	0.28	-0.6
2,322,435	-		DDA3937_RS10300	0.28	-0.1
2,322,435	-		DDA3937_RS10300	0.28	+0.3
2,322,435	-		DDA3937_RS10300	0.28	-0.2
2,322,555	+		DDA3937_RS10300	0.34	+2.0
2,322,555	+		DDA3937_RS10300	0.34	-2.9
2,322,556	-		DDA3937_RS10300	0.34	+0.8
2,322,556	-		DDA3937_RS10300	0.34	-0.6
2,322,639	+		DDA3937_RS10300	0.39	-0.0
2,322,729	+		DDA3937_RS10300	0.43	-0.2
2,322,729	+		DDA3937_RS10300	0.43	-0.9
2,322,730	-		DDA3937_RS10300	0.43	+0.3
2,322,732	-		DDA3937_RS10300	0.43	+0.6
2,322,738	-		DDA3937_RS10300	0.44	-1.7
2,322,873	-		DDA3937_RS10300	0.51	-0.6
2,322,873	-		DDA3937_RS10300	0.51	-0.1
2,322,876	+		DDA3937_RS10300	0.51	-0.4
2,322,877	-				+0.3
2,323,046	+		DDA3937_RS10300	0.60	+0.3
2,323,047	-		DDA3937_RS10300	0.60	-1.7
2,323,101	+		DDA3937_RS10300	0.63	-0.2
2,323,101	+		DDA3937_RS10300	0.63	-0.7
2,323,101	+		DDA3937_RS10300	0.63	-0.7
2,323,101	+		DDA3937_RS10300	0.63	+0.7
2,323,102	-		DDA3937_RS10300	0.63	-0.3
2,323,122	+		DDA3937_RS10300	0.64	+0.5
2,323,122	+		DDA3937_RS10300	0.64	+1.3
2,323,122	+		DDA3937_RS10300	0.64	-0.5
2,323,122	+		DDA3937_RS10300	0.64	-0.7
2,323,123	-		DDA3937_RS10300	0.64	-0.1
2,323,123	-		DDA3937_RS10300	0.64	-0.6
2,323,123	-		DDA3937_RS10300	0.64	-0.2
2,323,157	+		DDA3937_RS10300	0.66	+0.4
2,323,158	-		DDA3937_RS10300	0.66	+0.3
2,323,158	-		DDA3937_RS10300	0.66	-0.5
2,323,495	+		DDA3937_RS10300	0.83	-0.0
2,323,496	-		DDA3937_RS10300	0.83	-0.5
2,323,533	+		DDA3937_RS10300	0.85	-1.7
2,323,533	+		DDA3937_RS10300	0.85	-0.3
2,323,534	-		DDA3937_RS10300	0.85	-1.6
2,323,534	-		DDA3937_RS10300	0.85	-0.2
2,323,534	-		DDA3937_RS10300	0.85	-0.9
2,323,535	+		DDA3937_RS10300	0.85	+0.1
2,323,535	+		DDA3937_RS10300	0.85	+0.3
2,323,535	+		DDA3937_RS10300	0.85	-0.2
2,323,535	+		DDA3937_RS10300	0.85	-0.6
2,323,535	+		DDA3937_RS10300	0.85	-0.5
2,323,536	-		DDA3937_RS10300	0.85	-0.6
2,323,536	-		DDA3937_RS10300	0.85	-0.9
2,323,536	-		DDA3937_RS10300	0.85	+0.8
2,323,700	+				+0.1
2,323,701	-				-1.5
2,323,727	+				-0.7
2,323,727	+				-1.4
2,323,910	-		DDA3937_RS10305	0.21	-3.7
2,323,910	-		DDA3937_RS10305	0.21	-0.7
2,323,910	-		DDA3937_RS10305	0.21	+1.1
2,323,952	-		DDA3937_RS10305	0.32	-0.2
2,323,952	-		DDA3937_RS10305	0.32	-0.7
2,323,955	+		DDA3937_RS10305	0.33	-0.6
2,323,955	+		DDA3937_RS10305	0.33	+0.4
2,323,956	-		DDA3937_RS10305	0.33	-0.7
2,323,956	-		DDA3937_RS10305	0.33	+0.6
2,324,053	-		DDA3937_RS10305	0.58	-0.5
2,324,053	-		DDA3937_RS10305	0.58	-0.2
2,324,071	+		DDA3937_RS10305	0.62	-0.3
2,324,071	+		DDA3937_RS10305	0.62	+1.6
2,324,072	-		DDA3937_RS10305	0.63	-1.2
2,324,094	-		DDA3937_RS10305	0.68	-2.1
2,324,094	-		DDA3937_RS10305	0.68	-0.6
2,324,193	+				-0.7
2,324,194	-				-0.6
2,324,216	+				-0.0
2,324,217	-				-0.6
2,324,217	-				-1.7
2,324,219	+				-0.9
2,324,220	-				-2.6
2,324,225	+				+0.8
2,324,331	+				-0.5
2,324,331	+				+0.0
2,324,331	+				-2.1
2,324,331	+				+0.2
2,324,332	-				-1.0
2,324,332	-				-0.5
2,324,482	+		DDA3937_RS10310	0.27	+0.5
2,324,483	-		DDA3937_RS10310	0.27	-3.1
2,324,569	+		DDA3937_RS10310	0.37	+0.0
2,324,570	-				-0.3
2,324,671	-		DDA3937_RS10310	0.50	-0.7