Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10200

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,300,372	+				-0.0
2,300,372	+				+0.8
2,300,373	-				-1.3
2,300,373	-				-1.1
2,300,373	-				-0.1
2,300,373	-				-0.5
2,300,376	+				-0.4
2,300,376	+				-0.1
2,300,376	+				-0.3
2,300,377	-				+0.4
2,300,377	-				+0.3
2,300,377	-				-2.6
2,300,377	-				+0.7
2,300,377	-				+0.1
2,300,411	-				-0.7
2,300,411	-				-0.7
2,300,496	+				-1.3
2,300,496	+				+0.0
2,300,496	+				-0.3
2,300,497	-				+0.5
2,300,497	-				-0.5
2,300,540	-				-2.6
2,300,540	-				+0.3
2,300,543	+				-0.0
2,300,543	+				-0.8
2,300,543	+				-0.2
2,300,543	+				-1.3
2,300,543	+				-0.6
2,300,543	+				-0.2
2,300,544	-				-0.0
2,300,544	-				-0.7
2,300,544	-				+0.1
2,300,544	-				+0.4
2,300,544	-				-1.6
2,300,544	-				+0.1
2,300,544	-				-2.8
2,300,544	-				+1.8
2,300,544	-				-0.3
2,300,544	-				-0.3
2,300,544	-				+0.3
2,300,544	-				-0.3
2,300,545	+				-0.7
2,300,545	+				-0.1
2,300,545	+				-0.3
2,300,545	+				-0.9
2,300,545	+				-1.3
2,300,545	+				+0.1
2,300,546	-				+0.1
2,300,546	-				+0.4
2,300,546	-				-1.3
2,300,546	-				-0.3
2,300,546	-				+0.5
2,300,550	-				-0.1
2,300,665	+				-0.1
2,300,728	+				+0.3
2,300,729	-				+1.5
2,300,731	+				+0.3
2,300,731	+				-1.2
2,300,731	+				-0.0
2,300,732	-				-0.7
2,300,732	-				+0.9
2,300,742	-				+0.7
2,300,748	+				+0.5
2,300,748	+				-1.0
2,300,841	+				-0.7
2,300,882	-				-0.3
2,300,887	-				-0.6
2,300,890	-				-0.2
2,300,900	-				-0.2
2,300,963	+				-1.3
2,300,966	-				+0.3
2,300,966	-				-0.2
2,300,966	-				-0.0
2,300,966	-				+1.0
2,300,969	+				-0.5
2,300,970	-				+0.4
2,301,158	+				-0.4
2,301,165	-				+2.4
2,301,165	-				+0.3
2,301,229	-				-0.2
2,301,290	+				+0.4
2,301,290	+				-0.7
2,301,290	+				-0.6
2,301,290	+				-2.6
2,301,290	+				-0.7
2,301,290	+				-0.3
2,301,290	+				-1.0
2,301,290	+				+0.3
2,301,291	-				-1.2
2,301,291	-				-0.2
2,301,291	-				-0.5
2,301,291	-				-0.2
2,301,291	-				+0.3
2,301,291	-				-0.7
2,301,291	-				+0.4
2,301,291	-				-0.6
2,301,291	-				-1.0
2,301,292	+				-0.7
2,301,292	+				+0.1
2,301,293	-				-0.8
2,301,293	-				-0.4
2,301,449	+		DDA3937_RS10200	0.45	-1.2
2,301,463	-		DDA3937_RS10200	0.49	-0.8
2,301,480	-				+0.3
2,301,626	-				-0.5
2,301,626	-				-0.9
2,301,642	+				-0.6
2,301,642	+				-2.7
2,301,651	+				-0.3
2,301,651	+				-0.6
2,301,652	-				-1.1
2,301,652	-				+0.8
2,301,652	-				+0.4
2,301,652	-				-0.5
2,301,652	-				+1.0
2,301,652	-				+1.0
2,301,652	-				-1.9
2,301,683	+				-0.3
2,301,684	-				-0.1
2,301,701	+				+0.1
2,301,746	-				+0.7
2,301,835	+				-1.1
2,301,838	-				-0.5
2,301,838	-				-0.5
2,301,849	+				-1.3
2,301,867	+				-0.7
2,301,914	+				-0.7
2,301,947	+				+0.5
2,301,966	-				-0.2
2,302,009	-				-0.5
2,302,014	+				-0.8
2,302,026	+				-0.8
2,302,026	+				-1.6
2,302,102	+		DDA3937_RS10205	0.25	-0.4
2,302,162	-		DDA3937_RS10205	0.38	-1.1
2,302,239	-		DDA3937_RS10205	0.56	-0.2
2,302,288	+		DDA3937_RS10205	0.67	-0.6
2,302,289	-		DDA3937_RS10205	0.67	-0.6
2,302,294	+		DDA3937_RS10205	0.68	-0.2
2,302,294	+		DDA3937_RS10205	0.68	-1.6
2,302,348	+		DDA3937_RS10205	0.80	-0.6
2,302,348	+		DDA3937_RS10205	0.80	-0.1
2,302,348	+		DDA3937_RS10205	0.80	-0.5
2,302,389	-		DDA3937_RS10205	0.89	-1.2
2,302,390	+		DDA3937_RS10205	0.90	-0.1
2,302,415	+				-1.0
2,302,416	-				-2.3
2,302,416	-				-0.3
2,302,434	-				-1.7
2,302,444	+				-1.1
2,302,448	+				-1.1
2,302,449	-				-0.2
2,302,451	+				-2.7
2,302,604	+				-0.2
2,302,608	+				-2.3