Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09585

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,158,921	+		DDA3937_RS09580	0.75	-0.7
2,159,380	-				-0.7
2,159,380	-				-0.2
2,159,397	-				-1.3
2,159,399	-				-0.5
2,159,400	+				+0.3
2,159,494	+				-0.6
2,159,522	+				-0.5
2,159,532	-				-0.0
2,159,532	-				-0.7
2,159,585	-				+0.0
2,159,585	-				+0.3
2,159,585	-				-0.9
2,159,930	+				-1.3
2,160,024	+		DDA3937_RS09585	0.46	-0.6
2,160,025	-		DDA3937_RS09585	0.46	+0.3
2,160,049	+		DDA3937_RS09585	0.49	-1.3
2,160,050	-				-1.7
2,160,050	-		DDA3937_RS09585	0.49	-0.9
2,160,335	+		DDA3937_RS09585	0.79	-2.0
2,160,336	-				-1.3
2,160,450	+				+0.6
2,160,485	-				+0.1
2,160,513	+				-1.3
2,160,567	+				+1.1
2,160,567	+				-0.6
2,160,568	-				-2.2
2,160,569	+				-0.7
2,160,569	+				-0.3
2,160,569	+				+0.0
2,160,579	+				-1.6
2,160,640	+				+1.7
2,160,665	+				-0.9
2,160,665	+				+0.0
2,160,665	+				+0.8
2,160,665	+				-0.0
2,160,665	+				-0.2
2,160,666	-				+1.0
2,160,666	-				+0.7
2,160,666	-				-0.8
2,160,666	-				-0.2
2,160,667	+				+0.6
2,160,668	-				+0.1
2,160,815	+				+0.1
2,160,815	+				+0.4
2,160,815	+				-0.9
2,160,816	-				-3.0
2,160,823	+				-0.3
2,160,827	+				-0.1
2,160,859	-				-1.0
2,160,943	+				-0.6
2,160,943	+				+0.1
2,160,943	+				+0.5
2,160,943	+				-0.8
2,160,943	+				-0.2
2,160,943	+				+0.6
2,160,965	+				-1.3
2,160,980	+				-0.9
2,161,035	+				+0.7
2,161,044	+				+0.3
2,161,123	+		DDA3937_RS09590	0.17	+0.9
2,161,123	+		DDA3937_RS09590	0.17	+0.5
2,161,210	+		DDA3937_RS09590	0.34	-0.7
2,161,220	+		DDA3937_RS09590	0.36	+1.6
2,161,244	+		DDA3937_RS09590	0.41	+1.3
2,161,418	+		DDA3937_RS09590	0.76	-0.5
2,161,424	-		DDA3937_RS09590	0.78	-0.7
2,161,461	+		DDA3937_RS09590	0.85	-1.0
2,161,478	+		DDA3937_RS09590	0.88	-0.3
2,161,478	+		DDA3937_RS09590	0.88	-1.3
2,161,478	+		DDA3937_RS09590	0.88	-1.5
2,161,479	-		DDA3937_RS09590	0.89	-1.3
2,161,479	-		DDA3937_RS09590	0.89	-1.2