Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08585

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,936,912	+		DDA3937_RS08570	0.64	+0.4
1,936,912	+				-0.9
1,936,913	-		DDA3937_RS08570	0.65	-0.8
1,937,067	+				-2.4
1,937,067	+				-0.4
1,937,092	+				-0.4
1,937,092	+				-0.9
1,937,100	+				-0.6
1,937,100	+				-1.4
1,937,100	+				-1.4
1,937,100	+				-0.0
1,937,100	+				-1.6
1,937,100	+				-1.1
1,937,100	+				-0.9
1,937,101	-				+0.4
1,937,101	-				+0.6
1,937,101	-				+1.4
1,937,101	-				+0.4
1,937,121	+				-0.9
1,937,223	-		DDA3937_RS08575	0.25	+1.0
1,937,479	+				+0.6
1,937,480	-		DDA3937_RS08575	0.78	-1.1
1,937,480	-		DDA3937_RS08575	0.78	+0.7
1,937,480	-		DDA3937_RS08575	0.78	-0.0
1,937,480	-		DDA3937_RS08575	0.78	-0.1
1,937,484	+		DDA3937_RS08575	0.79	-0.5
1,937,484	+		DDA3937_RS08575	0.79	-0.4
1,937,484	+		DDA3937_RS08575	0.79	-0.2
1,937,485	-		DDA3937_RS08575	0.80	-0.4
1,937,485	-		DDA3937_RS08575	0.80	+0.8
1,937,485	-		DDA3937_RS08575	0.80	-0.3
1,937,490	+		DDA3937_RS08575	0.81	-0.4
1,937,490	+		DDA3937_RS08575	0.81	+0.3
1,937,491	-		DDA3937_RS08575	0.81	-0.7
1,937,532	-		DDA3937_RS08575	0.89	-0.6
1,937,585	+				-0.1
1,937,652	+		DDA3937_RS08580	0.29	-0.9
1,937,827	+				-1.0
1,937,828	-				+1.0
1,937,879	+		DDA3937_RS08585	0.11	-0.8
1,937,942	-		DDA3937_RS08585	0.25	-0.8
1,937,995	+		DDA3937_RS08585	0.37	+1.0
1,938,090	-		DDA3937_RS08585	0.58	-2.2
1,938,174	-		DDA3937_RS08585	0.77	-0.8
1,938,174	-		DDA3937_RS08585	0.77	+0.5
1,938,311	-				-0.0
1,938,311	-				-1.6
1,938,311	-				-0.6
1,938,311	-				-0.4
1,938,311	-				-0.9
1,938,353	+				-1.2
1,938,387	+				-1.0
1,938,387	+				+1.0
1,938,387	+				-0.6
1,938,388	-				+0.1
1,938,432	+				-0.8
1,938,488	+				-0.2
1,938,488	+				-0.4
1,938,488	+				-1.3
1,938,488	+				+0.3
1,938,488	+				+0.4
1,938,489	-				-0.1
1,938,489	-				-0.1
1,938,494	+				-0.2
1,938,495	-				-1.2
1,938,504	-				-2.1
1,938,629	+		DDA3937_RS08590	0.10	-0.8
1,938,677	-		DDA3937_RS08590	0.15	+0.1
1,938,774	+		DDA3937_RS08590	0.25	-0.0
1,938,774	+		DDA3937_RS08590	0.25	+0.4
1,938,774	+		DDA3937_RS08590	0.25	+0.5
1,938,775	-		DDA3937_RS08590	0.25	+0.1
1,938,775	-		DDA3937_RS08590	0.25	-0.5
1,938,775	-		DDA3937_RS08590	0.25	-1.2
1,938,775	-		DDA3937_RS08590	0.25	-1.1
1,938,930	-		DDA3937_RS08590	0.40	+0.6
1,939,124	+		DDA3937_RS08590	0.59	+0.1
1,939,125	-		DDA3937_RS08590	0.59	+0.9
1,939,125	-		DDA3937_RS08590	0.59	-0.9
1,939,126	+		DDA3937_RS08590	0.59	+0.1
1,939,183	+		DDA3937_RS08590	0.65	+0.6
1,939,184	-		DDA3937_RS08590	0.65	+0.6
1,939,184	-		DDA3937_RS08590	0.65	-0.1
1,939,187	+				+0.8
1,939,188	-		DDA3937_RS08590	0.65	-0.6
1,939,188	-		DDA3937_RS08590	0.65	-0.2
1,939,193	+		DDA3937_RS08590	0.66	+0.7
1,939,193	+		DDA3937_RS08590	0.66	-0.5
1,939,193	+		DDA3937_RS08590	0.66	+0.6
1,939,193	+		DDA3937_RS08590	0.66	-0.5
1,939,194	-		DDA3937_RS08590	0.66	+0.0
1,939,194	-		DDA3937_RS08590	0.66	+0.1
1,939,196	+		DDA3937_RS08590	0.66	-1.9
1,939,196	+		DDA3937_RS08590	0.66	+0.4
1,939,217	-		DDA3937_RS08590	0.68	-0.2
1,939,250	+		DDA3937_RS08590	0.71	+0.1
1,939,250	+		DDA3937_RS08590	0.71	-0.1
1,939,251	-		DDA3937_RS08590	0.71	+1.0
1,939,251	-		DDA3937_RS08590	0.71	+0.6
1,939,251	-		DDA3937_RS08590	0.71	-0.7
1,939,251	-		DDA3937_RS08590	0.71	-0.5
1,939,253	+		DDA3937_RS08590	0.72	+0.4
1,939,253	+		DDA3937_RS08590	0.72	+0.4
1,939,253	+		DDA3937_RS08590	0.72	+0.2
1,939,254	-		DDA3937_RS08590	0.72	+1.0