Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08075

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,829,723	+		DDA3937_RS08070	0.19	-0.5
1,829,723	+		DDA3937_RS08070	0.19	-1.1
1,829,724	-		DDA3937_RS08070	0.19	-0.2
1,829,724	-		DDA3937_RS08070	0.19	+0.4
1,829,724	-		DDA3937_RS08070	0.19	-0.8
1,829,724	-		DDA3937_RS08070	0.19	-0.6
1,829,741	+		DDA3937_RS08070	0.20	-0.6
1,829,742	-		DDA3937_RS08070	0.20	-0.9
1,829,745	+		DDA3937_RS08070	0.21	+0.1
1,829,745	+		DDA3937_RS08070	0.21	-1.5
1,829,746	-		DDA3937_RS08070	0.21	-0.1
1,829,746	-		DDA3937_RS08070	0.21	+0.2
1,829,746	-		DDA3937_RS08070	0.21	+0.3
1,829,746	-		DDA3937_RS08070	0.21	+0.1
1,829,746	-		DDA3937_RS08070	0.21	-2.4
1,829,781	+		DDA3937_RS08070	0.24	+0.4
1,829,781	+		DDA3937_RS08070	0.24	+0.2
1,829,782	-		DDA3937_RS08070	0.24	+1.0
1,829,782	-		DDA3937_RS08070	0.24	+0.4
1,829,782	-		DDA3937_RS08070	0.24	-1.2
1,829,850	+		DDA3937_RS08070	0.31	-1.6
1,829,850	+		DDA3937_RS08070	0.31	-0.1
1,829,875	-		DDA3937_RS08070	0.33	+0.3
1,829,895	-				-1.2
1,829,895	-		DDA3937_RS08070	0.35	-0.4
1,830,062	+		DDA3937_RS08070	0.51	+0.2
1,830,063	-				+2.4
1,830,155	-		DDA3937_RS08070	0.60	-0.9
1,830,225	+		DDA3937_RS08070	0.66	+0.2
1,830,225	+		DDA3937_RS08070	0.66	-2.8
1,830,225	+		DDA3937_RS08070	0.66	-0.1
1,830,226	-		DDA3937_RS08070	0.67	-0.9
1,830,226	-		DDA3937_RS08070	0.67	-0.6
1,830,226	-		DDA3937_RS08070	0.67	-0.2
1,830,234	+		DDA3937_RS08070	0.67	-0.6
1,830,234	+		DDA3937_RS08070	0.67	-0.7
1,830,234	+		DDA3937_RS08070	0.67	+0.2
1,830,234	+		DDA3937_RS08070	0.67	+0.4
1,830,234	+		DDA3937_RS08070	0.67	+0.4
1,830,234	+		DDA3937_RS08070	0.67	+0.1
1,830,234	+		DDA3937_RS08070	0.67	-0.3
1,830,235	-		DDA3937_RS08070	0.67	-0.3
1,830,235	-		DDA3937_RS08070	0.67	-1.0
1,830,347	+		DDA3937_RS08070	0.78	+0.4
1,830,347	+		DDA3937_RS08070	0.78	+0.1
1,830,348	-		DDA3937_RS08070	0.78	-0.3
1,830,348	-		DDA3937_RS08070	0.78	-2.2
1,830,354	+		DDA3937_RS08070	0.79	+0.7
1,830,355	-		DDA3937_RS08070	0.79	-0.5
1,830,451	+		DDA3937_RS08070	0.88	-0.4
1,830,451	+		DDA3937_RS08070	0.88	+0.4
1,830,480	+				+0.5
1,830,528	-				-0.5
1,830,610	+				-1.1
1,830,611	-				-1.6
1,830,621	+				-0.2
1,830,622	-				-0.0
1,830,651	-				+1.7
1,830,687	+				-0.4
1,830,688	-				-1.1
1,830,688	-				-0.6
1,830,847	+		DDA3937_RS08075	0.25	-3.3
1,830,847	+		DDA3937_RS08075	0.25	-0.4
1,830,847	+		DDA3937_RS08075	0.25	-0.3
1,830,847	+		DDA3937_RS08075	0.25	-0.2
1,830,847	+		DDA3937_RS08075	0.25	+0.3
1,830,847	+		DDA3937_RS08075	0.25	-0.9
1,830,847	+		DDA3937_RS08075	0.25	+0.8
1,830,848	-		DDA3937_RS08075	0.25	-0.2
1,831,113	-		DDA3937_RS08075	0.52	-0.3
1,831,113	-		DDA3937_RS08075	0.52	-0.3
1,831,196	-		DDA3937_RS08075	0.61	-0.6
1,831,450	+		DDA3937_RS08075	0.87	+0.0
1,831,450	+		DDA3937_RS08075	0.87	-0.2
1,831,450	+		DDA3937_RS08075	0.87	-0.3
1,831,451	-		DDA3937_RS08075	0.87	-1.2
1,831,451	-		DDA3937_RS08075	0.87	-2.3
1,831,451	-		DDA3937_RS08075	0.87	-0.0
1,831,552	+				+0.0
1,831,552	+				-0.4
1,831,552	+				-1.5
1,831,553	-				+0.5
1,831,634	-				-1.2
1,831,636	-				-0.0
1,831,719	+				+0.0
1,831,720	-				-0.8
1,831,720	-				-0.3
1,831,720	-				-0.1
1,831,727	-				-0.0
1,831,751	+				+0.8
1,831,910	+		DDA3937_RS08080	0.22	-1.6
1,831,910	+		DDA3937_RS08080	0.22	-0.1
1,831,910	+		DDA3937_RS08080	0.22	-0.2
1,831,910	+		DDA3937_RS08080	0.22	-0.3
1,831,911	-		DDA3937_RS08080	0.22	-0.6
1,831,911	-		DDA3937_RS08080	0.22	-0.0
1,831,911	-		DDA3937_RS08080	0.22	-0.3
1,831,911	-		DDA3937_RS08080	0.22	-1.6
1,831,911	-		DDA3937_RS08080	0.22	-0.8
1,831,911	-		DDA3937_RS08080	0.22	+0.1
1,832,078	+		DDA3937_RS08080	0.49	-1.0
1,832,078	+		DDA3937_RS08080	0.49	-0.4
1,832,079	-		DDA3937_RS08080	0.49	-0.2
1,832,107	+		DDA3937_RS08080	0.53	+0.6
1,832,107	+		DDA3937_RS08080	0.53	+0.2
1,832,107	+		DDA3937_RS08080	0.53	-0.2
1,832,218	+		DDA3937_RS08080	0.71	-0.5
1,832,219	-		DDA3937_RS08080	0.71	-0.7
1,832,249	-		DDA3937_RS08080	0.76	-0.0
1,832,249	-				+0.7
1,832,379	-				+0.0
1,832,393	+				-3.3
1,832,394	-				-0.6
1,832,394	-				-0.9
1,832,400	+				+0.0
1,832,400	+				-0.2
1,832,401	-				-0.6
1,832,401	-				-0.8
1,832,401	-				+0.2
1,832,401	-				-0.8
1,832,403	+				+0.4
1,832,410	-				-0.5
1,832,443	+				-1.0
1,832,444	-				-0.1
1,832,479	+				-0.8
1,832,480	-				-0.1
1,832,480	-				-0.1
1,832,480	-				+0.2
1,832,517	+				+1.0
1,832,517	+				+0.4
1,832,517	+				-0.5
1,832,519	+				-0.4
1,832,520	-				+2.7
1,832,520	-				+0.4
1,832,520	-				-0.9
1,832,521	+				-1.9
1,832,521	+				+1.4
1,832,522	-				+0.1
1,832,572	-				+0.4