Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08045

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,822,778	+				-0.2
1,822,779	-				+0.4
1,822,779	-				+1.0
1,822,869	-		DDA3937_RS08040	0.10	+0.5
1,822,872	-		DDA3937_RS08040	0.11	+0.2
1,822,887	-		DDA3937_RS08040	0.12	-0.0
1,823,588	+		DDA3937_RS08040	0.86	+0.3
1,823,589	-		DDA3937_RS08040	0.86	-1.0
1,823,610	-		DDA3937_RS08040	0.88	-1.2
1,823,610	-		DDA3937_RS08040	0.88	+0.3
1,823,610	-		DDA3937_RS08040	0.88	+1.1
1,823,610	-		DDA3937_RS08040	0.88	+0.0
1,823,613	+		DDA3937_RS08040	0.88	+1.7
1,823,613	+		DDA3937_RS08040	0.88	+0.3
1,823,613	+		DDA3937_RS08040	0.88	-1.9
1,823,614	-		DDA3937_RS08040	0.88	-0.3
1,823,614	-		DDA3937_RS08040	0.88	+0.0
1,823,614	-		DDA3937_RS08040	0.88	-0.0
1,823,614	-		DDA3937_RS08040	0.88	-0.2
1,823,614	-		DDA3937_RS08040	0.88	-1.5
1,823,614	-		DDA3937_RS08040	0.88	-0.2
1,823,618	+		DDA3937_RS08040	0.89	+1.1
1,823,618	+		DDA3937_RS08040	0.89	+0.1
1,823,665	+				+0.8
1,823,665	+				-0.2
1,823,665	+				-1.4
1,823,665	+				+1.1
1,823,666	-				-0.5
1,823,707	-				-1.2
1,823,761	-				+0.1
1,823,829	+		DDA3937_RS08045	0.11	-1.2
1,823,829	+		DDA3937_RS08045	0.11	-0.4
1,823,855	-		DDA3937_RS08045	0.14	+0.3
1,823,960	+		DDA3937_RS08045	0.25	+0.2
1,823,960	+		DDA3937_RS08045	0.25	+0.5
1,823,960	+		DDA3937_RS08045	0.25	+0.7
1,823,960	+		DDA3937_RS08045	0.25	+1.0
1,823,960	+		DDA3937_RS08045	0.25	-1.2
1,823,960	+		DDA3937_RS08045	0.25	-0.2
1,823,960	+		DDA3937_RS08045	0.25	+0.3
1,823,961	-		DDA3937_RS08045	0.25	+1.2
1,823,961	-		DDA3937_RS08045	0.25	+0.4
1,823,961	-		DDA3937_RS08045	0.25	+0.8
1,824,229	+		DDA3937_RS08045	0.53	+0.2
1,824,229	+		DDA3937_RS08045	0.53	+0.6
1,824,229	+		DDA3937_RS08045	0.53	+1.1
1,824,230	-		DDA3937_RS08045	0.53	+0.1
1,824,233	+		DDA3937_RS08045	0.53	-0.1
1,824,234	-		DDA3937_RS08045	0.53	+0.5
1,824,234	-				-0.2
1,824,471	+		DDA3937_RS08045	0.78	-1.2
1,824,544	+		DDA3937_RS08045	0.85	+0.8
1,824,544	+		DDA3937_RS08045	0.85	+0.6
1,824,646	+				+0.0
1,824,646	+				+0.8
1,824,686	+				-0.6
1,824,686	+				+0.5
1,824,687	-				+0.2
1,824,687	-				+0.8
1,824,687	-				+0.4
1,824,687	-				-1.0
1,824,693	+				-0.4
1,824,693	+				-2.4
1,824,693	+				+1.3
1,824,693	+				-0.9
1,824,693	+				-0.4
1,824,694	-				+2.0
1,824,694	-				-0.9
1,824,701	+				-0.3
1,824,884	-				+0.6
1,824,972	+		DDA3937_RS08050	0.17	+0.1
1,824,991	+		DDA3937_RS08050	0.19	+0.4
1,824,991	+		DDA3937_RS08050	0.19	-0.4
1,824,992	-		DDA3937_RS08050	0.19	-0.6
1,824,992	-		DDA3937_RS08050	0.19	+0.4
1,824,992	-		DDA3937_RS08050	0.19	+0.3
1,824,992	-		DDA3937_RS08050	0.19	+0.6
1,825,080	+				+0.4
1,825,080	+		DDA3937_RS08050	0.29	-0.8
1,825,081	-		DDA3937_RS08050	0.29	-0.2
1,825,081	-		DDA3937_RS08050	0.29	-1.6
1,825,081	-		DDA3937_RS08050	0.29	-0.2
1,825,081	-		DDA3937_RS08050	0.29	+0.3
1,825,081	-		DDA3937_RS08050	0.29	+0.1
1,825,081	-		DDA3937_RS08050	0.29	-0.5
1,825,219	-		DDA3937_RS08050	0.43	+0.7
1,825,331	+		DDA3937_RS08050	0.54	-0.3
1,825,331	+		DDA3937_RS08050	0.54	+0.7
1,825,332	-		DDA3937_RS08050	0.54	+1.4
1,825,332	-		DDA3937_RS08050	0.54	-0.6
1,825,411	-		DDA3937_RS08050	0.62	+0.5
1,825,456	+				+1.1
1,825,456	+		DDA3937_RS08050	0.67	+0.4
1,825,456	+		DDA3937_RS08050	0.67	-0.1
1,825,457	-		DDA3937_RS08050	0.67	-0.2
1,825,457	-		DDA3937_RS08050	0.67	-0.2
1,825,457	-		DDA3937_RS08050	0.67	-0.8
1,825,457	-		DDA3937_RS08050	0.67	-0.8
1,825,457	-		DDA3937_RS08050	0.67	-0.6
1,825,543	-		DDA3937_RS08050	0.76	-1.8
1,825,603	+		DDA3937_RS08050	0.82	+0.4
1,825,603	+		DDA3937_RS08050	0.82	-0.8
1,825,604	-		DDA3937_RS08050	0.82	-0.0
1,825,675	+		DDA3937_RS08050	0.90	+1.0