Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07995

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,810,314	-				-0.2
1,810,534	+		DDA3937_RS07985	0.11	-0.2
1,810,683	+		DDA3937_RS07985	0.49	+0.1
1,810,701	+		DDA3937_RS07985	0.54	-1.8
1,810,795	-		DDA3937_RS07985	0.78	-1.2
1,810,938	+				-2.6
1,810,962	-				+0.3
1,810,978	+				-0.8
1,811,048	+				+1.7
1,811,048	+				-0.2
1,811,048	+				-1.0
1,811,049	-				+1.4
1,811,049	-				+0.6
1,811,051	+				-1.2
1,811,052	-				-0.6
1,811,123	-				-0.1
1,811,123	-				-0.5
1,811,133	-				+1.7
1,811,133	-				-0.3
1,811,134	+				+0.1
1,811,158	-				-0.3
1,811,158	-				-0.0
1,811,158	-				+1.0
1,811,158	-				+0.2
1,811,267	+				-1.9
1,811,267	+				-0.1
1,811,273	+				-1.6
1,811,273	+				+0.8
1,811,273	+				+0.1
1,811,273	+				-1.0
1,811,273	+				-0.0
1,811,273	+				+1.0
1,811,273	+				-0.9
1,811,274	-				+0.4
1,811,314	-				-0.5
1,811,314	-				-1.1
1,811,314	-				-1.2
1,811,314	-				+1.2
1,811,314	-				+0.1
1,811,316	+				-0.7
1,811,316	+				+0.4
1,811,316	+				-0.4
1,811,316	+				+0.2
1,811,316	+				-0.3
1,811,316	+				-0.0
1,811,317	-				-0.6
1,811,317	-				-0.2
1,811,317	-				-1.0
1,811,317	-				-0.4
1,811,317	-				-0.0
1,811,317	-				-1.3
1,811,317	-				-1.4
1,811,317	-				-1.3
1,811,380	+		DDA3937_RS07995	0.12	+1.5
1,811,380	+		DDA3937_RS07995	0.12	+1.0
1,811,387	+		DDA3937_RS07995	0.13	+1.4
1,811,388	-		DDA3937_RS07995	0.13	+0.4
1,811,388	-				+0.4
1,811,560	+		DDA3937_RS07995	0.23	-0.4
1,811,560	+		DDA3937_RS07995	0.23	-0.2
1,811,561	-		DDA3937_RS07995	0.23	-0.8
1,811,561	-		DDA3937_RS07995	0.23	-0.5
1,811,561	-		DDA3937_RS07995	0.23	-0.2
1,811,562	+		DDA3937_RS07995	0.23	-0.6
1,811,562	+		DDA3937_RS07995	0.23	+1.2
1,811,562	+		DDA3937_RS07995	0.23	+0.4
1,811,563	-		DDA3937_RS07995	0.23	+0.8
1,811,563	-		DDA3937_RS07995	0.23	-1.0
1,811,716	-		DDA3937_RS07995	0.31	-1.2
1,811,722	+		DDA3937_RS07995	0.32	-0.7
1,811,722	+		DDA3937_RS07995	0.32	+0.1
1,811,722	+		DDA3937_RS07995	0.32	-3.8
1,811,722	+		DDA3937_RS07995	0.32	+1.0
1,811,722	+		DDA3937_RS07995	0.32	-0.2
1,811,723	-		DDA3937_RS07995	0.32	-0.3
1,811,723	-		DDA3937_RS07995	0.32	+0.0
1,811,723	-		DDA3937_RS07995	0.32	+0.5
1,811,760	+		DDA3937_RS07995	0.34	+0.5
1,811,760	+		DDA3937_RS07995	0.34	-1.2
1,811,761	-		DDA3937_RS07995	0.34	+0.6
1,811,761	-		DDA3937_RS07995	0.34	-0.6
1,811,761	-		DDA3937_RS07995	0.34	+0.2
1,811,761	-		DDA3937_RS07995	0.34	+0.4
1,811,761	-		DDA3937_RS07995	0.34	-0.2
1,811,761	-		DDA3937_RS07995	0.34	-0.8
1,811,866	-		DDA3937_RS07995	0.40	-0.7
1,811,866	-		DDA3937_RS07995	0.40	+0.4
1,811,866	-		DDA3937_RS07995	0.40	+1.1
1,811,874	+		DDA3937_RS07995	0.40	-0.7
1,811,874	+		DDA3937_RS07995	0.40	+0.8
1,811,874	+		DDA3937_RS07995	0.40	-1.5
1,811,875	-		DDA3937_RS07995	0.40	+0.8
1,812,020	-		DDA3937_RS07995	0.48	-0.4
1,812,064	+		DDA3937_RS07995	0.51	-0.0
1,812,064	+		DDA3937_RS07995	0.51	+0.5
1,812,153	+		DDA3937_RS07995	0.56	+1.4
1,812,154	-		DDA3937_RS07995	0.56	+1.4
1,812,154	-		DDA3937_RS07995	0.56	+0.4
1,812,532	+		DDA3937_RS07995	0.77	+1.0
1,812,532	+		DDA3937_RS07995	0.77	-0.8
1,812,571	-		DDA3937_RS07995	0.79	-1.1
1,812,574	-		DDA3937_RS07995	0.79	+0.4
1,812,600	+		DDA3937_RS07995	0.80	+0.5
1,812,766	+		DDA3937_RS07995	0.90	-1.3
1,812,766	+		DDA3937_RS07995	0.90	+0.4
1,812,766	+		DDA3937_RS07995	0.90	+1.2
1,812,767	-		DDA3937_RS07995	0.90	+0.1
1,812,769	-		DDA3937_RS07995	0.90	+0.2
1,812,769	-		DDA3937_RS07995	0.90	+0.2
1,812,769	-		DDA3937_RS07995	0.90	-2.2
1,812,769	-		DDA3937_RS07995	0.90	-1.2
1,812,769	-		DDA3937_RS07995	0.90	-1.2
1,812,882	+				-1.3
1,812,882	+				+1.3
1,812,909	+				-0.9
1,812,909	+				-0.5
1,812,910	-				-0.4
1,812,910	-				-0.6
1,812,978	+				+0.5
1,812,979	-				+1.3
1,812,979	-				-0.3
1,812,979	-				-0.3
1,812,983	-				+0.1
1,812,992	+				+0.9
1,813,168	+		DDA3937_RS08000	0.23	-1.3
1,813,168	+		DDA3937_RS08000	0.23	+0.1
1,813,168	+		DDA3937_RS08000	0.23	+0.3
1,813,168	+		DDA3937_RS08000	0.23	-1.2
1,813,168	+		DDA3937_RS08000	0.23	+1.5
1,813,169	-		DDA3937_RS08000	0.23	-0.7
1,813,169	-		DDA3937_RS08000	0.23	+0.2
1,813,304	+		DDA3937_RS08000	0.40	-0.2
1,813,304	+		DDA3937_RS08000	0.40	+0.9
1,813,305	-		DDA3937_RS08000	0.40	-0.3
1,813,305	-		DDA3937_RS08000	0.40	-1.5
1,813,305	-		DDA3937_RS08000	0.40	+0.1
1,813,588	+		DDA3937_RS08000	0.75	-0.2
1,813,588	+		DDA3937_RS08000	0.75	+0.4
1,813,784	+				-0.8
1,813,785	-				+0.6
1,813,789	+				-1.1
1,813,790	-				-1.2
1,813,921	+				+0.7
1,813,921	+				-1.9
1,813,922	-				-0.4