Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS07745 and DDA3937_RS07750 are separated by 351 nucleotides DDA3937_RS07750 and DDA3937_RS07755 overlap by 4 nucleotides
DDA3937_RS07745: DDA3937_RS07745 - AcsA protein, at 1,749,678 to 1,751,606
_RS07745
DDA3937_RS07750: DDA3937_RS07750 - iron-siderophore ABC transporter substrate-binding protein, at 1,751,958 to 1,752,875
_RS07750
DDA3937_RS07755: DDA3937_RS07755 - iron ABC transporter permease, at 1,752,872 to 1,753,894
_RS07755
Position (kb)
1751
1752
1753 Strain fitness (log2 ratio)
-2
-1
0
1 at 1751.189 kb on + strand, within DDA3937_RS07745 at 1751.235 kb on + strand, within DDA3937_RS07745 at 1751.235 kb on + strand, within DDA3937_RS07745 at 1751.236 kb on - strand, within DDA3937_RS07745 at 1751.361 kb on + strand, within DDA3937_RS07745 at 1751.361 kb on + strand, within DDA3937_RS07745 at 1751.361 kb on + strand, within DDA3937_RS07745 at 1751.417 kb on + strand at 1751.543 kb on + strand at 1751.544 kb on - strand at 1751.544 kb on - strand at 1751.594 kb on + strand at 1751.594 kb on + strand at 1751.604 kb on + strand at 1751.604 kb on + strand at 1751.634 kb on + strand at 1751.634 kb on + strand at 1751.634 kb on + strand at 1751.634 kb on + strand at 1751.635 kb on - strand at 1751.635 kb on - strand at 1751.913 kb on + strand at 1751.951 kb on + strand at 1751.951 kb on + strand at 1751.951 kb on + strand at 1751.967 kb on + strand at 1751.967 kb on + strand at 1751.968 kb on - strand at 1751.972 kb on - strand at 1751.972 kb on - strand at 1752.134 kb on - strand, within DDA3937_RS07750 at 1752.162 kb on + strand, within DDA3937_RS07750 at 1752.162 kb on + strand, within DDA3937_RS07750 at 1752.635 kb on + strand, within DDA3937_RS07750 at 1752.705 kb on + strand, within DDA3937_RS07750 at 1752.742 kb on + strand, within DDA3937_RS07750 at 1752.742 kb on + strand, within DDA3937_RS07750 at 1752.743 kb on - strand, within DDA3937_RS07750 at 1753.048 kb on + strand, within DDA3937_RS07755 at 1753.339 kb on + strand, within DDA3937_RS07755
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,751,189 + DDA3937_RS07745 0.78 -1.0 1,751,235 + DDA3937_RS07745 0.81 -1.2 1,751,235 + DDA3937_RS07745 0.81 -0.4 1,751,236 - DDA3937_RS07745 0.81 -0.4 1,751,361 + DDA3937_RS07745 0.87 -1.1 1,751,361 + DDA3937_RS07745 0.87 -1.1 1,751,361 + DDA3937_RS07745 0.87 -0.0 1,751,417 + +0.0 1,751,543 + +0.2 1,751,544 - +1.2 1,751,544 - +0.2 1,751,594 + +1.1 1,751,594 + +1.4 1,751,604 + +0.5 1,751,604 + -0.6 1,751,634 + -0.0 1,751,634 + +0.6 1,751,634 + -0.4 1,751,634 + +0.4 1,751,635 - +0.2 1,751,635 - -1.6 1,751,913 + -1.2 1,751,951 + -0.8 1,751,951 + +0.4 1,751,951 + -0.0 1,751,967 + +0.4 1,751,967 + +0.3 1,751,968 - -0.6 1,751,972 - -0.3 1,751,972 - -0.1 1,752,134 - DDA3937_RS07750 0.19 -1.2 1,752,162 + DDA3937_RS07750 0.22 -0.8 1,752,162 + DDA3937_RS07750 0.22 -1.7 1,752,635 + DDA3937_RS07750 0.74 -2.4 1,752,705 + DDA3937_RS07750 0.81 -0.9 1,752,742 + DDA3937_RS07750 0.85 -0.3 1,752,742 + DDA3937_RS07750 0.85 -0.3 1,752,743 - DDA3937_RS07750 0.86 -1.2 1,753,048 + DDA3937_RS07755 0.17 -0.9 1,753,339 + DDA3937_RS07755 0.46 -0.8
Or see this region's nucleotide sequence