Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07530

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,698,898	+		DDA3937_RS07525	0.52	-0.4
1,698,898	+		DDA3937_RS07525	0.52	+0.6
1,698,905	+				-0.3
1,699,094	+		DDA3937_RS07525	0.72	-0.0
1,699,260	+		DDA3937_RS07525	0.89	+0.2
1,699,260	+		DDA3937_RS07525	0.89	-0.6
1,699,260	+		DDA3937_RS07525	0.89	+1.9
1,699,261	-		DDA3937_RS07525	0.89	+0.0
1,699,261	-		DDA3937_RS07525	0.89	-1.8
1,699,261	-		DDA3937_RS07525	0.89	-1.3
1,699,261	-		DDA3937_RS07525	0.89	+0.4
1,699,261	-		DDA3937_RS07525	0.89	+0.0
1,699,313	+				-0.2
1,699,313	+				+0.1
1,699,313	+				-1.8
1,699,313	+				-2.2
1,699,313	+				+0.4
1,699,313	+				-0.2
1,699,313	+				+0.3
1,699,401	-				+0.3
1,699,431	+				+0.4
1,699,492	-				+0.3
1,699,515	+				+0.1
1,699,515	+				-0.4
1,699,515	+				-0.4
1,699,515	+				-2.2
1,699,516	-				-0.2
1,699,516	-				-2.0
1,699,516	-				+0.1
1,699,577	+				-0.7
1,699,578	-				-0.1
1,699,578	-				-2.2
1,699,717	+				+1.1
1,699,759	-				-1.8
1,699,761	+				+0.1
1,699,761	+				+1.7
1,699,761	+				+0.7
1,699,762	-				-0.6
1,699,762	-				-0.8
1,699,783	-				+0.1
1,699,813	+				+0.2
1,699,814	-				-0.3
1,699,814	-				-0.6
1,699,816	+				+0.5
1,699,816	+				-0.8
1,699,833	+				+0.0
1,699,848	+				-2.8
1,699,849	-				-0.6
1,699,849	-				+1.1
1,699,870	+				-0.2
1,699,874	+				-1.4
1,699,874	+				-0.0
1,699,875	-				+1.4
1,699,882	+				+1.4
1,699,964	+		DDA3937_RS07530	0.11	-1.2
1,699,964	+		DDA3937_RS07530	0.11	+1.1
1,699,964	+		DDA3937_RS07530	0.11	+0.4
1,699,965	-		DDA3937_RS07530	0.11	-0.7
1,699,965	-		DDA3937_RS07530	0.11	-0.8
1,700,006	-		DDA3937_RS07530	0.15	+0.1
1,700,272	+		DDA3937_RS07530	0.41	+0.2
1,700,272	+		DDA3937_RS07530	0.41	-0.4
1,700,273	-		DDA3937_RS07530	0.41	+0.1
1,700,273	-		DDA3937_RS07530	0.41	+0.9
1,700,273	-		DDA3937_RS07530	0.41	-0.0
1,700,273	-		DDA3937_RS07530	0.41	+0.3
1,700,325	+		DDA3937_RS07530	0.47	+0.7
1,700,325	+		DDA3937_RS07530	0.47	+0.1
1,700,541	+		DDA3937_RS07530	0.68	+0.7
1,700,542	-				+1.2
1,700,542	-		DDA3937_RS07530	0.68	+0.5
1,700,637	+		DDA3937_RS07530	0.77	+0.8
1,700,638	-		DDA3937_RS07530	0.77	-0.6
1,700,638	-		DDA3937_RS07530	0.77	-1.9
1,700,638	-		DDA3937_RS07530	0.77	+0.2
1,700,640	+		DDA3937_RS07530	0.77	-0.4
1,700,640	+		DDA3937_RS07530	0.77	-0.2
1,700,696	-		DDA3937_RS07530	0.83	-0.2
1,700,696	-		DDA3937_RS07530	0.83	-1.0
1,700,696	-		DDA3937_RS07530	0.83	+0.1
1,700,788	+				-0.8
1,700,905	+				-0.5
1,700,917	+				+0.6
1,700,933	+				-0.4
1,700,937	+				-0.7
1,700,937	+				+0.0
1,700,938	-				+0.1
1,700,938	-				-1.6
1,700,967	-				-0.2
1,700,996	+				+0.1
1,700,996	+				+0.2
1,700,997	-				+0.1
1,700,997	-				+0.1
1,700,997	-				-0.8
1,701,050	+				-0.2
1,701,050	+				+0.0
1,701,050	+				-1.6
1,701,050	+				+0.9
1,701,129	+				+0.1
1,701,150	+				+0.9
1,701,150	+				+0.3
1,701,151	-				+0.4
1,701,151	-				-0.4
1,701,153	-		DDA3937_RS07535	0.10	-0.5
1,701,153	-		DDA3937_RS07535	0.10	+0.9
1,701,334	+		DDA3937_RS07535	0.28	+0.3
1,701,360	+		DDA3937_RS07535	0.30	+0.4
1,701,361	-		DDA3937_RS07535	0.31	+0.4
1,701,507	+		DDA3937_RS07535	0.45	+0.9
1,701,507	+		DDA3937_RS07535	0.45	-0.8
1,701,507	+		DDA3937_RS07535	0.45	-0.7
1,701,508	-		DDA3937_RS07535	0.45	-0.9
1,701,508	-		DDA3937_RS07535	0.45	-0.3
1,701,579	+		DDA3937_RS07535	0.52	+1.0
1,701,579	+		DDA3937_RS07535	0.52	-0.2
1,701,579	+		DDA3937_RS07535	0.52	-2.2
1,701,580	-		DDA3937_RS07535	0.52	-1.0
1,701,580	-		DDA3937_RS07535	0.52	-1.2
1,701,580	-		DDA3937_RS07535	0.52	-0.1
1,701,580	-		DDA3937_RS07535	0.52	-0.2
1,701,580	-		DDA3937_RS07535	0.52	-2.2
1,701,580	-		DDA3937_RS07535	0.52	+0.0
1,701,580	-		DDA3937_RS07535	0.52	+0.7
1,701,615	-		DDA3937_RS07535	0.56	-0.8
1,701,825	+				+2.7
1,701,825	+		DDA3937_RS07535	0.76	-0.2
1,701,825	+		DDA3937_RS07535	0.76	-0.8
1,701,826	-		DDA3937_RS07535	0.76	+0.9
1,701,826	-		DDA3937_RS07535	0.76	-0.3