Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07485

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,688,639	+				-2.3
1,688,640	-				+0.0
1,688,640	-				-0.2
1,688,743	+				-2.6
1,688,743	+				-0.6
1,688,743	+				-0.3
1,688,748	+				-0.3
1,688,748	+				-0.5
1,688,748	+				+0.5
1,688,749	-				+0.0
1,688,749	-				-0.5
1,688,749	-				-0.6
1,688,764	+				-1.4
1,688,838	+				-0.1
1,688,839	-				-1.9
1,688,839	-				-0.5
1,688,839	-				-0.8
1,688,871	+				+0.3
1,688,871	+				-0.8
1,688,887	-				-0.9
1,688,887	-				-0.1
1,688,887	-				-0.2
1,689,180	+				-0.9
1,689,181	-				-0.7
1,689,181	-				-0.9
1,689,229	-				+1.1
1,689,280	+				-0.9
1,689,280	+				+0.1
1,689,280	+				-1.2
1,689,281	-				+0.3
1,689,281	-				-1.6
1,689,281	-				-0.6
1,689,281	-				+0.3
1,689,281	-				+0.2
1,689,312	+				+0.4
1,689,360	-				-0.2
1,689,360	-				-0.6
1,689,385	+				+1.4
1,689,385	+				+0.6
1,689,385	+				-1.2
1,689,386	-				-0.6
1,689,386	-				-0.8
1,689,386	-				+0.1
1,689,410	+				-0.6
1,689,410	+				-1.3
1,689,410	+				-2.8
1,689,410	+				-0.4
1,689,410	+				-1.6
1,689,411	-				-0.6
1,689,411	-				+0.7
1,689,411	-				+0.3
1,689,411	-				+0.7
1,689,431	+				-0.7
1,689,431	+				-1.0
1,689,431	+				-1.8
1,689,432	-				+0.4
1,689,432	-				+1.4
1,689,432	-				-0.8
1,689,437	+				+0.2
1,689,437	+				-0.2
1,689,437	+				-0.6
1,689,437	+				-1.6
1,689,437	+				+1.6
1,689,437	+				-0.4
1,689,437	+				+0.1
1,689,438	-				+1.8
1,689,438	-				+1.5
1,689,502	+				+0.3
1,689,502	+				-0.4
1,689,502	+				+1.4
1,689,503	-				-0.3
1,689,510	+				-0.6
1,689,510	+				-0.3
1,689,511	-				-0.1
1,689,531	+				-0.2
1,689,546	-				+0.1
1,689,564	+				-0.9
1,689,571	+				-0.4
1,689,571	+				+0.1
1,689,571	+				+0.8
1,689,572	-				-0.2
1,689,572	-				-0.4
1,689,572	-				-1.2
1,689,572	-				-2.8
1,689,572	-				+0.4
1,689,577	+				+0.1
1,689,577	+				-0.6
1,689,578	-				+1.2
1,689,584	-				+0.4
1,689,661	+				+0.0
1,689,661	+				-1.2
1,689,661	+				-0.4
1,689,661	+				-0.1
1,689,661	+				-1.8
1,689,661	+				+0.2
1,689,661	+				+0.4
1,689,661	+				-0.7
1,689,661	+				-1.4
1,689,662	-				-0.2
1,689,662	-				-1.2
1,689,664	-				-0.1
1,689,664	-				+0.0
1,689,710	+		DDA3937_RS07485	0.10	+0.4
1,689,710	+		DDA3937_RS07485	0.10	+0.4
1,689,829	-		DDA3937_RS07485	0.23	+0.0
1,689,829	-				+1.0
1,689,834	+		DDA3937_RS07485	0.23	-0.4
1,689,850	-		DDA3937_RS07485	0.25	-0.3
1,689,850	-		DDA3937_RS07485	0.25	+0.7
1,689,930	+		DDA3937_RS07485	0.33	+0.2
1,689,967	+		DDA3937_RS07485	0.37	-1.2
1,690,099	+		DDA3937_RS07485	0.51	+0.4
1,690,099	+		DDA3937_RS07485	0.51	+1.1
1,690,099	+		DDA3937_RS07485	0.51	+0.5
1,690,100	-		DDA3937_RS07485	0.51	-0.7
1,690,100	-		DDA3937_RS07485	0.51	-0.4
1,690,197	+		DDA3937_RS07485	0.61	-1.0
1,690,197	+		DDA3937_RS07485	0.61	+0.3
1,690,198	-		DDA3937_RS07485	0.61	+0.3
1,690,198	-		DDA3937_RS07485	0.61	-0.1
1,690,198	-		DDA3937_RS07485	0.61	-0.3
1,690,198	-		DDA3937_RS07485	0.61	-0.2
1,690,198	-		DDA3937_RS07485	0.61	+0.0
1,690,269	+		DDA3937_RS07485	0.69	+0.2
1,690,269	+		DDA3937_RS07485	0.69	-0.3
1,690,269	+		DDA3937_RS07485	0.69	+0.1
1,690,269	+		DDA3937_RS07485	0.69	+0.6
1,690,269	+		DDA3937_RS07485	0.69	+0.4
1,690,270	-		DDA3937_RS07485	0.69	-0.1
1,690,309	+		DDA3937_RS07485	0.73	+0.1
1,690,309	+		DDA3937_RS07485	0.73	+0.2
1,690,309	+		DDA3937_RS07485	0.73	+0.6
1,690,309	+		DDA3937_RS07485	0.73	+0.4
1,690,309	+		DDA3937_RS07485	0.73	+0.4
1,690,309	+		DDA3937_RS07485	0.73	+1.3
1,690,309	+		DDA3937_RS07485	0.73	+0.7
1,690,310	-		DDA3937_RS07485	0.73	+0.6
1,690,310	-		DDA3937_RS07485	0.73	-0.1
1,690,310	-		DDA3937_RS07485	0.73	-0.4
1,690,310	-		DDA3937_RS07485	0.73	+0.4
1,690,459	+		DDA3937_RS07485	0.89	-0.2
1,690,459	+				+0.8
1,690,459	+		DDA3937_RS07485	0.89	-0.0
1,690,460	-		DDA3937_RS07485	0.89	+1.1
1,690,474	-				-1.5
1,690,668	+				+1.0
1,690,669	-				-0.6
1,690,738	+				-0.4
1,690,738	+				+1.2
1,690,795	+				-0.3
1,691,021	+				-0.8
1,691,126	-				-0.9
1,691,142	-		DDA3937_RS07490	0.10	+0.0
1,691,159	+		DDA3937_RS07490	0.12	-1.9
1,691,159	+		DDA3937_RS07490	0.12	-0.1
1,691,160	-		DDA3937_RS07490	0.12	-1.4
1,691,368	+		DDA3937_RS07490	0.28	-0.6
1,691,368	+		DDA3937_RS07490	0.28	+0.2
1,691,369	-		DDA3937_RS07490	0.28	+1.2
1,691,369	-		DDA3937_RS07490	0.28	-1.6
1,691,369	-		DDA3937_RS07490	0.28	-0.6
1,691,369	-		DDA3937_RS07490	0.28	+0.0
1,691,398	+				-0.2
1,691,398	+		DDA3937_RS07490	0.30	-1.4
1,691,399	-		DDA3937_RS07490	0.30	-1.2
1,691,399	-		DDA3937_RS07490	0.30	-1.0
1,691,429	+		DDA3937_RS07490	0.32	-0.8
1,691,433	-		DDA3937_RS07490	0.33	-0.6