Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07295

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,645,124	+				+0.4
1,645,128	+				+0.4
1,645,128	+				+0.4
1,645,128	+				-0.6
1,645,129	-				-0.4
1,645,129	-				-0.2
1,645,129	-				-0.6
1,645,129	-				+0.2
1,645,129	-				+0.9
1,645,229	-		DDA3937_RS07290	0.11	-0.4
1,645,229	-		DDA3937_RS07290	0.11	+0.2
1,645,229	-		DDA3937_RS07290	0.11	+0.4
1,645,229	-		DDA3937_RS07290	0.11	-0.0
1,645,229	-		DDA3937_RS07290	0.11	-0.5
1,645,229	-		DDA3937_RS07290	0.11	+0.8
1,645,231	-		DDA3937_RS07290	0.11	-0.9
1,645,231	-		DDA3937_RS07290	0.11	-0.4
1,645,231	-		DDA3937_RS07290	0.11	+0.8
1,645,269	+		DDA3937_RS07290	0.16	-1.9
1,645,269	+		DDA3937_RS07290	0.16	+0.5
1,645,269	+		DDA3937_RS07290	0.16	-0.4
1,645,269	+		DDA3937_RS07290	0.16	+0.0
1,645,269	+		DDA3937_RS07290	0.16	+0.2
1,645,269	+		DDA3937_RS07290	0.16	-0.3
1,645,270	-		DDA3937_RS07290	0.16	+0.4
1,645,270	-		DDA3937_RS07290	0.16	-0.1
1,645,270	-		DDA3937_RS07290	0.16	-1.7
1,645,270	-		DDA3937_RS07290	0.16	-1.7
1,645,270	-		DDA3937_RS07290	0.16	-0.9
1,645,270	-		DDA3937_RS07290	0.16	+0.7
1,645,270	-		DDA3937_RS07290	0.16	-1.1
1,645,270	-		DDA3937_RS07290	0.16	-0.3
1,645,270	-		DDA3937_RS07290	0.16	+0.4
1,645,273	+		DDA3937_RS07290	0.16	-1.4
1,645,273	+		DDA3937_RS07290	0.16	+0.2
1,645,273	+		DDA3937_RS07290	0.16	-0.3
1,645,273	+				+0.4
1,645,273	+		DDA3937_RS07290	0.16	-0.5
1,645,274	-		DDA3937_RS07290	0.16	-0.3
1,645,274	-		DDA3937_RS07290	0.16	-0.5
1,645,370	-		DDA3937_RS07290	0.27	+0.4
1,645,371	+		DDA3937_RS07290	0.27	+0.4
1,645,371	+		DDA3937_RS07290	0.27	-0.0
1,645,372	-		DDA3937_RS07290	0.27	-0.1
1,645,433	-		DDA3937_RS07290	0.34	-1.0
1,645,460	+		DDA3937_RS07290	0.37	+0.9
1,645,460	+		DDA3937_RS07290	0.37	-0.9
1,645,548	+		DDA3937_RS07290	0.47	+0.4
1,645,548	+		DDA3937_RS07290	0.47	+0.0
1,645,549	-				+0.4
1,645,549	-		DDA3937_RS07290	0.47	-0.9
1,645,626	+		DDA3937_RS07290	0.55	-0.2
1,645,650	+		DDA3937_RS07290	0.58	-1.0
1,645,651	-		DDA3937_RS07290	0.58	+1.4
1,645,653	+		DDA3937_RS07290	0.58	-1.3
1,645,672	+		DDA3937_RS07290	0.60	-0.8
1,645,673	-		DDA3937_RS07290	0.60	+0.4
1,645,673	-		DDA3937_RS07290	0.60	-0.7
1,645,673	-		DDA3937_RS07290	0.60	-0.8
1,645,719	+		DDA3937_RS07290	0.66	-1.0
1,645,720	-		DDA3937_RS07290	0.66	+2.4
1,645,751	+		DDA3937_RS07290	0.69	+2.0
1,645,818	+		DDA3937_RS07290	0.77	-0.7
1,645,818	+		DDA3937_RS07290	0.77	+0.3
1,645,818	+		DDA3937_RS07290	0.77	-1.1
1,645,818	+		DDA3937_RS07290	0.77	+0.3
1,645,818	+		DDA3937_RS07290	0.77	+0.1
1,645,818	+		DDA3937_RS07290	0.77	-0.6
1,645,818	+		DDA3937_RS07290	0.77	-0.9
1,645,818	+		DDA3937_RS07290	0.77	+0.1
1,645,818	+		DDA3937_RS07290	0.77	+0.1
1,645,819	-		DDA3937_RS07290	0.77	-0.3
1,645,819	-		DDA3937_RS07290	0.77	-0.1
1,645,819	-		DDA3937_RS07290	0.77	-0.1
1,645,819	-		DDA3937_RS07290	0.77	-1.6
1,645,955	-				-0.8
1,645,983	+				-0.7
1,645,984	-				+0.4
1,645,990	+				-0.6
1,645,990	+				-0.6
1,645,991	-				+0.4
1,645,991	-				-1.1
1,645,991	-				-0.5
1,645,991	-				-0.3
1,646,001	+				+0.6
1,646,008	+				+0.4
1,646,008	+				-0.6
1,646,008	+				-0.2
1,646,009	-				-0.6
1,646,026	+				+0.9
1,646,027	-				-0.4
1,646,027	-				-1.6
1,646,027	-				+0.2
1,646,062	-				-1.1
1,646,112	+				-1.4
1,646,113	-				-1.1
1,646,115	+				-0.3
1,646,115	+				-0.1
1,646,116	-				+0.3
1,646,116	-				+0.2
1,646,142	+		DDA3937_RS07295	0.13	+0.4
1,646,143	-		DDA3937_RS07295	0.13	-0.6
1,646,143	-		DDA3937_RS07295	0.13	-0.4
1,646,143	-		DDA3937_RS07295	0.13	-0.4
1,646,143	-		DDA3937_RS07295	0.13	-0.2
1,646,187	+		DDA3937_RS07295	0.19	-1.8
1,646,188	-		DDA3937_RS07295	0.19	-0.8
1,646,289	+		DDA3937_RS07295	0.31	-0.2
1,646,290	-		DDA3937_RS07295	0.31	+0.3
1,646,312	+		DDA3937_RS07295	0.34	+0.9
1,646,313	-		DDA3937_RS07295	0.34	-0.2
1,646,313	-		DDA3937_RS07295	0.34	-1.0
1,646,350	+		DDA3937_RS07295	0.39	+0.4
1,646,350	+		DDA3937_RS07295	0.39	-0.6
1,646,350	+		DDA3937_RS07295	0.39	-1.7
1,646,351	-		DDA3937_RS07295	0.39	+0.8
1,646,351	-		DDA3937_RS07295	0.39	-1.1
1,646,352	+				+0.4
1,646,352	+		DDA3937_RS07295	0.39	-0.6
1,646,403	+		DDA3937_RS07295	0.45	-0.3
1,646,428	-		DDA3937_RS07295	0.48	-1.1
1,646,595	+		DDA3937_RS07295	0.69	+0.4
1,646,603	-		DDA3937_RS07295	0.70	-0.7
1,646,701	+		DDA3937_RS07295	0.82	+0.8
1,646,702	-		DDA3937_RS07295	0.82	-2.0
1,646,702	-		DDA3937_RS07295	0.82	-0.9
1,646,702	-		DDA3937_RS07295	0.82	-0.8
1,646,702	-		DDA3937_RS07295	0.82	-0.1
1,646,779	+				-0.9
1,646,780	-				-1.6
1,646,780	-				-0.6
1,646,781	+				-1.1
1,646,782	-				-0.6
1,646,782	-				-0.2
1,646,813	+				-0.6
1,646,813	+				+0.6
1,646,813	+				+0.8
1,646,814	-				-0.7
1,646,814	-				+1.4
1,646,819	+				-0.4
1,646,820	-				-1.2
1,646,820	-				-0.2
1,646,846	-				+1.0
1,646,925	+				-0.1
1,646,925	+				-1.6
1,647,059	+		DDA3937_RS07300	0.27	-0.6
1,647,059	+		DDA3937_RS07300	0.27	+0.4
1,647,059	+		DDA3937_RS07300	0.27	-0.3
1,647,059	+		DDA3937_RS07300	0.27	-0.4
1,647,059	+		DDA3937_RS07300	0.27	-0.6
1,647,060	-		DDA3937_RS07300	0.27	-0.5
1,647,060	-		DDA3937_RS07300	0.27	-1.1
1,647,060	-		DDA3937_RS07300	0.27	-0.1
1,647,093	+		DDA3937_RS07300	0.32	+0.4
1,647,093	+		DDA3937_RS07300	0.32	-0.1
1,647,093	+		DDA3937_RS07300	0.32	-0.1
1,647,127	+		DDA3937_RS07300	0.36	-0.4
1,647,128	-		DDA3937_RS07300	0.36	+0.2
1,647,128	-		DDA3937_RS07300	0.36	+0.2
1,647,129	+		DDA3937_RS07300	0.36	-0.1
1,647,129	+		DDA3937_RS07300	0.36	-1.4
1,647,129	+		DDA3937_RS07300	0.36	-1.1
1,647,129	+		DDA3937_RS07300	0.36	-0.7
1,647,130	-		DDA3937_RS07300	0.37	-0.2
1,647,130	-		DDA3937_RS07300	0.37	+0.4
1,647,130	-		DDA3937_RS07300	0.37	+0.0
1,647,130	-		DDA3937_RS07300	0.37	+0.0
1,647,130	-		DDA3937_RS07300	0.37	+2.0
1,647,130	-		DDA3937_RS07300	0.37	+0.4
1,647,197	+		DDA3937_RS07300	0.45	+1.2
1,647,198	-		DDA3937_RS07300	0.46	+0.1
1,647,198	-		DDA3937_RS07300	0.46	+2.3
1,647,237	-		DDA3937_RS07300	0.51	+0.4
1,647,237	-		DDA3937_RS07300	0.51	-0.1
1,647,266	+		DDA3937_RS07300	0.54	+0.8
1,647,277	+		DDA3937_RS07300	0.56	-0.8
1,647,277	+		DDA3937_RS07300	0.56	+0.3
1,647,278	-		DDA3937_RS07300	0.56	-1.0
1,647,318	+		DDA3937_RS07300	0.61	+0.1
1,647,318	+		DDA3937_RS07300	0.61	+1.1
1,647,319	-		DDA3937_RS07300	0.61	-1.2
1,647,354	+		DDA3937_RS07300	0.66	-0.3
1,647,354	+		DDA3937_RS07300	0.66	-0.3
1,647,456	+		DDA3937_RS07300	0.79	-0.3
1,647,456	+		DDA3937_RS07300	0.79	+0.7
1,647,457	-		DDA3937_RS07300	0.80	-3.5
1,647,457	-		DDA3937_RS07300	0.80	-0.8
1,647,459	+		DDA3937_RS07300	0.80	-0.3
1,647,459	+		DDA3937_RS07300	0.80	-0.5
1,647,460	-		DDA3937_RS07300	0.80	-0.3
1,647,468	+		DDA3937_RS07300	0.81	+0.2
1,647,484	+		DDA3937_RS07300	0.83	-0.2
1,647,484	+		DDA3937_RS07300	0.83	-1.7
1,647,484	+		DDA3937_RS07300	0.83	-0.2
1,647,525	+		DDA3937_RS07300	0.88	+0.1
1,647,551	+				+0.0
1,647,653	+				-0.6
1,647,731	-				+0.0
1,647,743	+				+1.2
1,647,743	+				-1.1
1,647,744	-				-0.6
1,647,744	-				-0.7
1,647,841	+				-1.6
1,647,841	+				-1.7
1,647,841	+				+0.5
1,647,842	-				-0.6
1,647,842	-				+0.5
1,647,842	-				-0.2