Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07175

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,616,481	-		DDA3937_RS07170	0.29	-0.3
1,616,518	+		DDA3937_RS07170	0.33	+0.5
1,616,519	-		DDA3937_RS07170	0.33	-1.0
1,616,521	+		DDA3937_RS07170	0.33	-0.0
1,616,521	+		DDA3937_RS07170	0.33	-1.9
1,616,522	-		DDA3937_RS07170	0.33	-0.6
1,616,842	+		DDA3937_RS07170	0.61	-0.5
1,616,871	+		DDA3937_RS07170	0.64	-0.0
1,616,872	-		DDA3937_RS07170	0.64	-0.1
1,617,275	+				+0.7
1,617,276	-				+0.5
1,617,276	-				-0.3
1,617,276	-				-1.4
1,617,276	-				-1.5
1,617,276	-				-0.0
1,617,396	-				-0.2
1,617,716	+		DDA3937_RS07175	0.31	-0.6
1,617,716	+		DDA3937_RS07175	0.31	-1.9
1,617,717	-				+0.5
1,618,065	+		DDA3937_RS07175	0.70	-1.1
1,618,168	+		DDA3937_RS07175	0.81	+2.0
1,618,376	+				-0.4
1,618,376	+				+1.3
1,618,376	+				-0.3
1,618,377	-				-0.5
1,618,431	-				-0.1
1,618,452	+				+2.8
1,618,453	-				-0.4
1,618,465	+				-1.2
1,618,465	+				+0.5
1,618,466	-				-0.4
1,618,466	-				+0.0
1,618,478	-				+0.5
1,618,498	+				-1.1
1,618,499	-				-1.0
1,618,499	-				-0.4
1,618,505	-				+0.1
1,618,505	-				-0.4
1,618,558	+		DDA3937_RS07180	0.17	-0.2
1,618,603	+		DDA3937_RS07180	0.28	-0.5
1,618,604	-		DDA3937_RS07180	0.28	+0.5
1,618,604	-		DDA3937_RS07180	0.28	-1.0
1,618,746	+		DDA3937_RS07180	0.64	-0.1
1,618,746	+		DDA3937_RS07180	0.64	+0.6
1,618,747	-				-0.5
1,618,747	-		DDA3937_RS07180	0.65	-1.2
1,618,821	-		DDA3937_RS07180	0.83	+0.3
1,618,862	+				-0.6
1,618,916	-				-0.7
1,618,935	+				-0.5
1,618,935	+				+1.5
1,618,935	+				+0.2
1,618,935	+				+0.0
1,618,935	+				-1.3
1,618,936	-				-1.4
1,618,936	-				+0.5
1,618,936	-				-1.1
1,618,945	+				-0.8
1,618,945	+				-1.0
1,618,945	+				-0.1
1,618,945	+				-0.3
1,618,945	+				-0.3
1,618,946	-				-1.0
1,618,946	-				-0.2
1,618,981	-				-0.8
1,618,981	-				+1.2
1,618,981	-				+0.5
1,619,019	-				-0.4
1,619,019	-				-1.2
1,619,121	+		DDA3937_RS07185	0.21	+0.0
1,619,122	-		DDA3937_RS07185	0.22	+0.0
1,619,122	-		DDA3937_RS07185	0.22	-0.3
1,619,122	-		DDA3937_RS07185	0.22	-1.9
1,619,187	+		DDA3937_RS07185	0.30	-1.3
1,619,188	-		DDA3937_RS07185	0.30	-1.5
1,619,228	-		DDA3937_RS07185	0.35	-1.2
1,619,266	-		DDA3937_RS07185	0.40	+0.5
1,619,286	+		DDA3937_RS07185	0.43	-0.2
1,619,287	-		DDA3937_RS07185	0.43	-0.8
1,619,311	+		DDA3937_RS07185	0.46	-0.5
1,619,311	+		DDA3937_RS07185	0.46	+0.4
1,619,311	+		DDA3937_RS07185	0.46	-2.3
1,619,311	+		DDA3937_RS07185	0.46	-1.9
1,619,311	+		DDA3937_RS07185	0.46	+0.0
1,619,311	+		DDA3937_RS07185	0.46	-0.6
1,619,311	+		DDA3937_RS07185	0.46	+0.7
1,619,311	+		DDA3937_RS07185	0.46	+1.2
1,619,311	+		DDA3937_RS07185	0.46	+0.8
1,619,311	+		DDA3937_RS07185	0.46	+0.6
1,619,311	+		DDA3937_RS07185	0.46	+1.6
1,619,311	+		DDA3937_RS07185	0.46	+0.1
1,619,312	-		DDA3937_RS07185	0.46	+0.6
1,619,312	-		DDA3937_RS07185	0.46	-0.1
1,619,312	-		DDA3937_RS07185	0.46	+0.8
1,619,312	-		DDA3937_RS07185	0.46	+0.3
1,619,312	-		DDA3937_RS07185	0.46	+0.4
1,619,314	+		DDA3937_RS07185	0.47	-0.3
1,619,314	+		DDA3937_RS07185	0.47	+1.0
1,619,315	-		DDA3937_RS07185	0.47	-0.3
1,619,315	-		DDA3937_RS07185	0.47	-1.5
1,619,315	-		DDA3937_RS07185	0.47	-2.9
1,619,315	-		DDA3937_RS07185	0.47	-0.5