Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS06755 and DDA3937_RS06760 are separated by 158 nucleotides DDA3937_RS06760 and DDA3937_RS06765 are separated by 423 nucleotides
DDA3937_RS06755: DDA3937_RS06755 - glycosyltransferase family 2 protein, at 1,510,117 to 1,511,010
_RS06755
DDA3937_RS06760: DDA3937_RS06760 - EpsG family protein, at 1,511,169 to 1,512,095
_RS06760
DDA3937_RS06765: DDA3937_RS06765 - DUF616 domain-containing protein, at 1,512,519 to 1,513,304
_RS06765
Position (kb)
1511
1512
1513 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1510.563 kb on + strand, within DDA3937_RS06755 at 1510.564 kb on - strand, within DDA3937_RS06755 at 1510.655 kb on + strand, within DDA3937_RS06755 at 1510.660 kb on + strand, within DDA3937_RS06755 at 1510.660 kb on + strand, within DDA3937_RS06755 at 1510.796 kb on - strand at 1511.099 kb on + strand at 1511.214 kb on - strand at 1511.368 kb on + strand, within DDA3937_RS06760 at 1511.374 kb on + strand, within DDA3937_RS06760 at 1511.384 kb on + strand, within DDA3937_RS06760 at 1511.386 kb on + strand, within DDA3937_RS06760 at 1511.386 kb on + strand, within DDA3937_RS06760 at 1511.485 kb on - strand, within DDA3937_RS06760 at 1511.536 kb on - strand, within DDA3937_RS06760 at 1511.729 kb on - strand, within DDA3937_RS06760 at 1511.754 kb on + strand, within DDA3937_RS06760 at 1511.827 kb on + strand, within DDA3937_RS06760 at 1511.829 kb on + strand, within DDA3937_RS06760 at 1511.829 kb on + strand, within DDA3937_RS06760 at 1511.975 kb on - strand, within DDA3937_RS06760 at 1512.148 kb on + strand at 1512.169 kb on + strand at 1512.216 kb on + strand at 1512.243 kb on - strand at 1512.551 kb on + strand at 1512.551 kb on + strand at 1512.771 kb on + strand, within DDA3937_RS06765 at 1512.771 kb on + strand, within DDA3937_RS06765 at 1512.772 kb on - strand, within DDA3937_RS06765 at 1512.877 kb on + strand, within DDA3937_RS06765 at 1512.941 kb on + strand, within DDA3937_RS06765 at 1512.941 kb on + strand, within DDA3937_RS06765 at 1512.943 kb on + strand, within DDA3937_RS06765
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,510,563 + DDA3937_RS06755 0.50 -0.3 1,510,564 - DDA3937_RS06755 0.50 -1.0 1,510,655 + DDA3937_RS06755 0.60 -1.5 1,510,660 + DDA3937_RS06755 0.61 +1.1 1,510,660 + DDA3937_RS06755 0.61 -0.5 1,510,796 - -0.5 1,511,099 + +1.8 1,511,214 - +0.5 1,511,368 + DDA3937_RS06760 0.21 -1.7 1,511,374 + DDA3937_RS06760 0.22 -0.9 1,511,384 + DDA3937_RS06760 0.23 +0.5 1,511,386 + DDA3937_RS06760 0.23 -1.6 1,511,386 + DDA3937_RS06760 0.23 -0.8 1,511,485 - DDA3937_RS06760 0.34 -1.5 1,511,536 - DDA3937_RS06760 0.40 -1.1 1,511,729 - DDA3937_RS06760 0.60 -0.4 1,511,754 + DDA3937_RS06760 0.63 -1.7 1,511,827 + DDA3937_RS06760 0.71 -0.1 1,511,829 + DDA3937_RS06760 0.71 +0.7 1,511,829 + DDA3937_RS06760 0.71 -2.3 1,511,975 - DDA3937_RS06760 0.87 +0.7 1,512,148 + +0.2 1,512,169 + -0.1 1,512,216 + -0.2 1,512,243 - -1.3 1,512,551 + -0.3 1,512,551 + -0.1 1,512,771 + DDA3937_RS06765 0.32 -2.3 1,512,771 + DDA3937_RS06765 0.32 +0.3 1,512,772 - DDA3937_RS06765 0.32 +0.1 1,512,877 + DDA3937_RS06765 0.46 +0.1 1,512,941 + DDA3937_RS06765 0.54 -2.0 1,512,941 + DDA3937_RS06765 0.54 -1.1 1,512,943 + DDA3937_RS06765 0.54 -1.8
Or see this region's nucleotide sequence